Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00091 ATGGCGGATACCTGTTGCGGCTTTTTGACTGAGGGGGACAAGTCGTCTCGGGAGGCGAGGCGGAGGAGGATGGAGCTTAGAAAGTTTAAGTTTGGTGCTGATATGCCTACGTTGGACGCCGAGAGCCAGAAAAAACGTCAGAAGCTCGAGGTTTGTTCCCGATCGGTTTCTAGAAACTGTGAGCGTTCGGCGGAGATCTGTGTTTCCGATGACGGAAAATGTGACGAAGTGTTGGATAATAGAACTGAGAATAAGGAGATCTTATGTTCGAGAGAGCCGTTGGTCGTTGAAGTTCCGATGAAGTGTCAGTCTGCCCCAGTACTTATGAGGCCAAAAGTTTCCGATGACTTCCCAAAGTTTGGGACGGCTTTGGTGTGCGGAAGGCGGAGAGACATGGAGGACGCTGTCTCTATTCATCCTTGTTTTTTCCGACGTGATTTCGAAACGACATCTTCTTCGTTTCACTATTTCGGTGTGTACGACGGCCATGGCTGCTCTCATGTTTCTACCAGGTGTCAAGAACGACTGCATGTGTTGGTGAAAGAAGAGCTGGACAAAACGGAGCCGCCGGCGATTGAGTGGGAAAAGTTCATGGTGAGAAGTTTCAGGAAAATGGACAAGGAGGTAGTGGCGTTAAATGTTGGCGATGTAGCTTCGAAGTGCAGGTGCGAACTACAGTCCCCGGAATGCGACGCTGTCGGATCTACAGCTGTTGTTTCAGTTCTTACATCGGACAAGATAATCATTGCGAACTGCGGCGACTCGAGAGCAGTGCTTTGTCGTAACGGACATGCCATACCTCTTTCTTCCGATCACAAGCCGGATCGTCCAGACGAACTGAGTCGGATCTGCGCCGCCGGTGGACGAGTCATCTACTGGGACGGCCCAAGAGTTCTTGGAGTTCTAGCCATGTCCAGGGCTATAGGTGACAACTACCTCAAGCCATATGTAAACTGCGAGCCAGAGGTGACGTCGACTGATCGAACGGCAGAAGACGAATGTCTTATACTGGCCAGCGACGGGCTGTGGGACGTGGTGTCGAACGAGACGGCGTGTGGGGTGGCGCTCATGTGCCTGCGAGGGAAAGCAAAGGGTGCGTTCAGGAGAAGAGAGAGTAAAGACGGTGGGGGAGAGATGTCGGACGAGGCATGTACAGAGGCGTCCATGTTGCTCACGAAGCTGGCTTTGGCCAGGGATAGTTCTGACAATGTGAGTGTGGTGGTTGTCGATCTGAGGAAGGACGCGTGGCCTCATAATTATTAA 1263 51.94 MADTCCGFLTEGDKSSREARRRRMELRKFKFGADMPTLDAESQKKRQKLEVCSRSVSRNCERSAEICVSDDGKCDEVLDNRTENKEILCSREPLVVEVPMKCQSAPVLMRPKVSDDFPKFGTALVCGRRRDMEDAVSIHPCFFRRDFETTSSSFHYFGVYDGHGCSHVSTRCQERLHVLVKEELDKTEPPAIEWEKFMVRSFRKMDKEVVALNVGDVASKCRCELQSPECDAVGSTAVVSVLTSDKIIIANCGDSRAVLCRNGHAIPLSSDHKPDRPDELSRICAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVNCEPEVTSTDRTAEDECLILASDGLWDVVSNETACGVALMCLRGKAKGAFRRRESKDGGGEMSDEACTEASMLLTKLALARDSSDNVSVVVVDLRKDAWPHNY 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 499563 501198 - Bpe022189.1 Bpe08g00091 106967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00091 420 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
Bpe08g00091 420 CDD PP2Cc 119 398 IPR001932 -
Bpe08g00091 420 PANTHER ALPHABET, ISOFORM E-RELATED 41 414 - -
Bpe08g00091 420 Pfam Protein phosphatase 2C 126 404 IPR001932 -
Bpe08g00091 420 PANTHER PROTEIN PHOSPHATASE 2C 37 41 414 - -
Bpe08g00091 420 ProSiteProfiles PPM-type phosphatase domain profile. 119 411 IPR001932 -
Bpe08g00091 420 SMART PP2C_4 107 409 IPR001932 -
Bpe08g00091 420 Gene3D - 110 415 IPR036457 -
Bpe08g00091 420 SUPERFAMILY PP2C-like 118 412 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00119 Bpe08g00091 CCT
Bpe01g00119 Bpe08g00091 ECH
Bpe08g00091 Bpe11g00748 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00091 Bpe-Chr8:499563 Bpe08g00498 Bpe-Chr8:3265320 1.62E-75 dispersed
Bpe01g00119 Bpe-Chr1:688960 Bpe08g00091 Bpe-Chr8:499563 0 wgd
Bpe11g00748 Bpe-Chr11:5673131 Bpe08g00091 Bpe-Chr8:499563 1.12E-119 wgd
Bpe15g01272 Bpe-Chr15:21139929 Bpe08g00091 Bpe-Chr8:499563 1.07E-134 wgd
Bpe04g01718 Bpe-Chr4:23010274 Bpe08g00091 Bpe-Chr8:499563 9.15E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00091 K14497 - jre:108998487 493.812