Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00093 ATGGGTGAGGAGCTGAAGATTAGCGCGTACGAACCCGATGCTGATGCTACTGATGGTGAGGAGGAGCGAGTGCTAGAATGGGAGGTGGGTTTGCCCAATTCCGAAAATCTGACTCCTCTATCTCAGGTTCTGATATCGCCGGAGCTTGCCTCCGCCTTTAGAATCTCTCCGGAGCCTCGCCGGACCGTACAGGACGTCAATCGGGCATCTCAGACTACGTTATGTAATCTCCGTGGCGGACAATCACAAGCCTTGTCTTCTAATAATTTCAAGTCGTTCGACGATGATCGCACTGACGATATTGACCCCATGGTCGTAGAGTGGGATGATGGTGGACATCAAGACGGAGCCGCCTCAGATTCGAGGAAACTGGCGAAGTTCGATTGCGCCGAAGAGGCAGATTCAGCTCTGCAAACTGATTCGACCGACGATCCTTCTGCTCGGAGCTCAAAGCGACCGAGGTTAGTCTGGACTCCACAATTACACAAGCGCTTCGTCGATGTCGTCGCTCACCTAGGAATAAAAAGCGCAGTCCCTAAAACAATTATGCAATTGATGAACGTGGAGGGCTTAACAAGAGAGAACGTCGCTAGTCATCTTCAGAAATACCGTCTCTACTTGAAGAGGATGCAAGGATTCTCCAACGACGGACCATCTTCCTCTGATCAGCTCTTAGCATCAACGCCATTGCCGAATAGCTTGAAAGAGGTCAACTCCAGCGCCAATTCACTAGGAAATGGACATATTCCGATGCCTATTCCGATCCCGTATATGCCACCTCCGATGATGCCTATGCCTGTCTTTGGGATGCGCCCGGCAAATGGCTACCAGGGGTTCGAGTCTTACCCCTACAACTTGATCCAACAGAGAGACTGGTACGGGAATAAGTACGGTTCTGCTTCGTCTTACCCTCACGCTGCTCCCAGTGCTGATGACAAATGA 942 50.96 MGEELKISAYEPDADATDGEEERVLEWEVGLPNSENLTPLSQVLISPELASAFRISPEPRRTVQDVNRASQTTLCNLRGGQSQALSSNNFKSFDDDRTDDIDPMVVEWDDGGHQDGAASDSRKLAKFDCAEEADSALQTDSTDDPSARSSKRPRLVWTPQLHKRFVDVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGFSNDGPSSSDQLLASTPLPNSLKEVNSSANSLGNGHIPMPIPIPYMPPPMMPMPVFGMRPANGYQGFESYPYNLIQQRDWYGNKYGSASSYPHAAPSADDK 313
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 515257 516198 - Bpe022192.1 Bpe08g00093 106969
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00093 313 MobiDBLite consensus disorder prediction 215 241 - -
Bpe08g00093 313 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 307 - -
Bpe08g00093 313 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 307 IPR044841 GO:0003700|GO:0006355
Bpe08g00093 313 Gene3D - 149 211 - -
Bpe08g00093 313 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 153 205 IPR006447 GO:0003677
Bpe08g00093 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 149 208 IPR017930 -
Bpe08g00093 313 SUPERFAMILY Homeodomain-like 150 209 IPR009057 -
Bpe08g00093 313 MobiDBLite consensus disorder prediction 133 155 - -
Bpe08g00093 313 Pfam Myb-like DNA-binding domain 156 204 IPR001005 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00533 Bpe-Chr4:3389074 Bpe08g00093 Bpe-Chr8:515257 9.34E-39 dispersed
Bpe08g00093 Bpe-Chr8:515257 Bpe02g01970 Bpe-Chr2:21547512 8.33E-25 dispersed
Bpe08g00093 Bpe-Chr8:515257 Bpe02g00025 Bpe-Chr2:215854 3.92E-42 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21705 PF00249 Myb_DNA-binding 1.80E-08 CL0123 Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00093 - - cpep:111787368 390.578