Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe08g00093 | ATGGGTGAGGAGCTGAAGATTAGCGCGTACGAACCCGATGCTGATGCTACTGATGGTGAGGAGGAGCGAGTGCTAGAATGGGAGGTGGGTTTGCCCAATTCCGAAAATCTGACTCCTCTATCTCAGGTTCTGATATCGCCGGAGCTTGCCTCCGCCTTTAGAATCTCTCCGGAGCCTCGCCGGACCGTACAGGACGTCAATCGGGCATCTCAGACTACGTTATGTAATCTCCGTGGCGGACAATCACAAGCCTTGTCTTCTAATAATTTCAAGTCGTTCGACGATGATCGCACTGACGATATTGACCCCATGGTCGTAGAGTGGGATGATGGTGGACATCAAGACGGAGCCGCCTCAGATTCGAGGAAACTGGCGAAGTTCGATTGCGCCGAAGAGGCAGATTCAGCTCTGCAAACTGATTCGACCGACGATCCTTCTGCTCGGAGCTCAAAGCGACCGAGGTTAGTCTGGACTCCACAATTACACAAGCGCTTCGTCGATGTCGTCGCTCACCTAGGAATAAAAAGCGCAGTCCCTAAAACAATTATGCAATTGATGAACGTGGAGGGCTTAACAAGAGAGAACGTCGCTAGTCATCTTCAGAAATACCGTCTCTACTTGAAGAGGATGCAAGGATTCTCCAACGACGGACCATCTTCCTCTGATCAGCTCTTAGCATCAACGCCATTGCCGAATAGCTTGAAAGAGGTCAACTCCAGCGCCAATTCACTAGGAAATGGACATATTCCGATGCCTATTCCGATCCCGTATATGCCACCTCCGATGATGCCTATGCCTGTCTTTGGGATGCGCCCGGCAAATGGCTACCAGGGGTTCGAGTCTTACCCCTACAACTTGATCCAACAGAGAGACTGGTACGGGAATAAGTACGGTTCTGCTTCGTCTTACCCTCACGCTGCTCCCAGTGCTGATGACAAATGA | 942 | 50.96 | MGEELKISAYEPDADATDGEEERVLEWEVGLPNSENLTPLSQVLISPELASAFRISPEPRRTVQDVNRASQTTLCNLRGGQSQALSSNNFKSFDDDRTDDIDPMVVEWDDGGHQDGAASDSRKLAKFDCAEEADSALQTDSTDDPSARSSKRPRLVWTPQLHKRFVDVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGFSNDGPSSSDQLLASTPLPNSLKEVNSSANSLGNGHIPMPIPIPYMPPPMMPMPVFGMRPANGYQGFESYPYNLIQQRDWYGNKYGSASSYPHAAPSADDK | 313 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 515257 | 516198 | - | Bpe022192.1 | Bpe08g00093 | 106969 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe08g00093 | 313 | MobiDBLite | consensus disorder prediction | 215 | 241 | - | - | |
| Bpe08g00093 | 313 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 1 | 307 | - | - | |
| Bpe08g00093 | 313 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 1 | 307 | IPR044841 | GO:0003700|GO:0006355 | |
| Bpe08g00093 | 313 | Gene3D | - | 149 | 211 | - | - | |
| Bpe08g00093 | 313 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 153 | 205 | IPR006447 | GO:0003677 | |
| Bpe08g00093 | 313 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 149 | 208 | IPR017930 | - | |
| Bpe08g00093 | 313 | SUPERFAMILY | Homeodomain-like | 150 | 209 | IPR009057 | - | |
| Bpe08g00093 | 313 | MobiDBLite | consensus disorder prediction | 133 | 155 | - | - | |
| Bpe08g00093 | 313 | Pfam | Myb-like DNA-binding domain | 156 | 204 | IPR001005 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe04g00533 | Bpe-Chr4:3389074 | Bpe08g00093 | Bpe-Chr8:515257 | 9.34E-39 | dispersed | |
| Bpe08g00093 | Bpe-Chr8:515257 | Bpe02g01970 | Bpe-Chr2:21547512 | 8.33E-25 | dispersed | |
| Bpe08g00093 | Bpe-Chr8:515257 | Bpe02g00025 | Bpe-Chr2:215854 | 3.92E-42 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 21705 | PF00249 | Myb_DNA-binding | 1.80E-08 | CL0123 | Bpe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe08g00093 | - | - | cpep:111787368 | 390.578 |