Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00098 ATGGAAAATGCCCTTTTTCTTCACGAGCTGGATCAAGGTGAGTTTGCTCCGGCCGTGAGTGCGAGCTCTGCCGAACTATCTTCGGTTGCATCTGGGAGCTCGAACTCAGACGGAGGATCTTTCCCCCTGCCTGCAGGCTTCACCCCCGGCGTTGACTCTCCTTCAGACGATAGTGACTTCTCCGAGACTGTCCTCAAGTACATAAACCAGATACTTATGGAAGAGAACATAGAGGAGAAGCCTTGTATGTTTTATGATCCTTTGGGGCTCAAACACACAGAGAAATCGTTCTACGATGTTCTAAACAAAACCTACCCTTCTTCCCCAAACCAGCCTTCTCTGTCTATTGAGAGTCTGAGCAGTGATCATGGAAGTAATGGTAGCACTACTAGTCTCAGCAACTACGCTGATCGCCAGTGGATGAGTAATTTTGGAGAGACTAACCAGTACTTATCTCAGACATCTTTGGCTGGCAAATCCGTTTTTCTTTCCAAAGTTGAGTCTAGTTCACAGGCTCTCGGTCATAATCAAAACAGTCTGAGATTCAATGGCGATGACCTGGTTTCCAAACTGCTGGCTCAGAATATTTATAGCAATAGTGAATCAGTCTTACAGTTTAAGAAAGGATTAGAAGAGGCTAGTAAATTTCTGCCTGAAGGTAATCAACTATTACTAAATTTGGGGAGCAGCTCGACGAAGGGAGAGGCTGCACATATGAATAACGTGGTAGAGAAGGCTAAGATCGAGAAAGAGAATTCATCGAAAACTTCGGAAGAGATGAATTCTCCGAGCAAATCAAAGGGAAGGAAGAATCGTGAAAGGGAAGATGAAGATATGTATTCAGACGAAGGGCGAAGTAACAAGCAATTGGCAGTTTATGTTGATGAGATTGAGCTATCTGAGATGTTTGATAGAGTGTTGCTTCACGGAGAGGGAAAAAACTATAATGGCCTATGTAATAGAGATGAAAAGCAGGAAGATGAAGCATGTAAGAAAGATCAGATAAAAAAAGAGCCTCAAACAGCAAATGGAGGGAGAGCTCGAGGAAAGAGACAGGGAAAGAAAACGGAAAATGTGGATTTGACCACCCTTTTGATCCAGTGTGCTCAGTCTGTATCGAATGATGATCGAAGGACAGCTAATGAATTGATTAAGCAGATAAGGCAACATTCGTCGCCGATTGGGGATGGCTCCCAGAGATTAGCTCATTACTTTGTTAACGCTCTCGAGGCCAGGTTGGCCGGGACGGGGACCGGAACCAAATTATTCTTCACTTCCTTAGCTTCCAAGAAGATTTCGGCCTTTGATATGTTGAAATCCTACCAAGTTAACCTTGTGGCATGTCCTTTCAAGAAGATTTCCTTATTTTTCGCAAACAAAATGATTTTTAAGTTTGCGGAGAAAGCAGAAACCCTTCACATCATAGACTTTGGCATTCTTTATGGATTCCAATGGCCAATTCTAATTCAGCATCTGTCATTACTTCCCGGTGGACCTCCCAAGTTAAGAATTACGGGTATAGAGTTTCCTCAACCTGGCTTCCGCCCCGTTGAGAGAATCGAGGAGACTGGGCATCGATTGGAAAAATATTGCAATCGATTTAAAGTTCCTTTTGAATATAATGCCATAGCTTCGCATAATTGGGAAACTATCCAGATCGAGGATCTTAAACTCAGAAGCAACGAGGTGATTGCTGTGAACTGTCTGTTCAGGTTCAAGAACTTACTTGACGAGACAGTCGAAGAAAACAGTCCGAAGAATGCTCTTCTGAGCCTAATCAGGAAGATCAATCCTAATATTTTTGTGCATGCGATTGCCAATGGATCCTACAATTCCCCATTCTTCATCACTCGATTCAGAGAAGCTCTGTTTTACTACTCTGCTTTGTTCGATATGTTTGATACCAATATATCTCGTGAAAACAAAGAACGAATGATGTTCGAGAGAGAGTTCTTCGGACGAGAAGCCATGAACGTCATTGCATGCGAGGGCCTAGAAAGAGTCGAGAGGCCTGAAACATATAAACAATGGCAGGTGAGGTCCTTGAGGGCTGGTTTCAGACAGCTTTCTCTGGACAAAGAGATGATTAACAAATTTAGAAACAAGTTGAAAATGAATTATCACAAAGACTTTGTACTCGATGAAGATGGCAATTGGATGCTGCAAGGATGGAAGGGTCGGATTGTCTTTGCTTCCAGTTGCTGGGTACCGGCCTAA 2217 43.17 MENALFLHELDQGEFAPAVSASSAELSSVASGSSNSDGGSFPLPAGFTPGVDSPSDDSDFSETVLKYINQILMEENIEEKPCMFYDPLGLKHTEKSFYDVLNKTYPSSPNQPSLSIESLSSDHGSNGSTTSLSNYADRQWMSNFGETNQYLSQTSLAGKSVFLSKVESSSQALGHNQNSLRFNGDDLVSKLLAQNIYSNSESVLQFKKGLEEASKFLPEGNQLLLNLGSSSTKGEAAHMNNVVEKAKIEKENSSKTSEEMNSPSKSKGRKNREREDEDMYSDEGRSNKQLAVYVDEIELSEMFDRVLLHGEGKNYNGLCNRDEKQEDEACKKDQIKKEPQTANGGRARGKRQGKKTENVDLTTLLIQCAQSVSNDDRRTANELIKQIRQHSSPIGDGSQRLAHYFVNALEARLAGTGTGTKLFFTSLASKKISAFDMLKSYQVNLVACPFKKISLFFANKMIFKFAEKAETLHIIDFGILYGFQWPILIQHLSLLPGGPPKLRITGIEFPQPGFRPVERIEETGHRLEKYCNRFKVPFEYNAIASHNWETIQIEDLKLRSNEVIAVNCLFRFKNLLDETVEENSPKNALLSLIRKINPNIFVHAIANGSYNSPFFITRFREALFYYSALFDMFDTNISRENKERMMFEREFFGREAMNVIACEGLERVERPETYKQWQVRSLRAGFRQLSLDKEMINKFRNKLKMNYHKDFVLDEDGNWMLQGWKGRIVFASSCWVPA 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 534774 536990 - Bpe022197.1 Bpe08g00098 106974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00098 738 ProSiteProfiles GRAS family profile. 352 736 IPR005202 -
Bpe08g00098 738 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 30 737 IPR005202 -
Bpe08g00098 738 Pfam GRAS domain family 362 735 IPR005202 -
Bpe08g00098 738 MobiDBLite consensus disorder prediction 109 131 - -
Bpe08g00098 738 MobiDBLite consensus disorder prediction 245 284 - -
Bpe08g00098 738 MobiDBLite consensus disorder prediction 28 58 - -
Bpe08g00098 738 PANTHER SCARECROW-LIKE PROTEIN 34 30 737 - -
Bpe08g00098 738 MobiDBLite consensus disorder prediction 328 354 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00125 Bpe08g00098 CCT
Bpe01g00125 Bpe08g00098 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01322 Bpe-Chr4:19668540 Bpe08g00098 Bpe-Chr8:534774 0 dispersed
Bpe08g00098 Bpe-Chr8:534774 Bpe11g00755 Bpe-Chr11:5725210 1.23E-06 dispersed
Bpe01g00125 Bpe-Chr1:740163 Bpe08g00098 Bpe-Chr8:534774 0 wgd
Bpe11g00754 Bpe-Chr11:5722509 Bpe08g00098 Bpe-Chr8:534774 1.06E-140 wgd
Bpe15g01283 Bpe-Chr15:21191189 Bpe08g00098 Bpe-Chr8:534774 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21706 PF03514 GRAS 1.10E-113 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00098 - - mcha:111017073 844.343