Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00100 AGAGAGAGAATGGCGATCTTCATAGCATCCCTAGCTTGCCTTGTATCAGTAATGTGGGTGGCTGAAGCCAGGATTCCAGGAGTTTACGGCGGCGGAGCATGGGAAACAGCTCATGCTACCTTCTATGGTGGTTCCGACGCATCTGGTACAATGGGAGGAGCTTGTGGGTATGGCAATCTGTACAGCCAGGGTTACGGTGTGAACACGGGGGCGCTCAGCACAGCGTTGTTCAACAGCGGCCTGAGCTGTGGCGCCTGCTTCGAGATAAAGTGTGCTAACGATCGACAATGGTGCCATCCCGGAAGCCCATCAATCTACATTACTGCTACTAACTTCTGTCCTCCCAACTTCGCTCTTCCAAACGACAATGGCGGTTGGTGCAACCCACCTCGCCCCCACTTCGACCTTGCTATGCCTATGTTCCTCAAGATCGCCGAATACCGCGCTGGAATCGTGCCCGTCGCTTACCGCCGAGTGCCCTGCCGGAAGCAGGGCGGGATGAGATTTACGATCAATGGATTCCAGTACTTCAACTTGGTTCTGATATCGAATGTCGCCGGTGCCGGGGACATCGTGAGGGTGAGCGTAAAGGGGACGAGGACGGGATGGATGAGCATGAGCAGAAACTGGGGTCAAAACTGGCAGTCAAACGCAGGTTTGGTAGGGCAGGCATTGTCATTTAGGGTGACAGGCAGTGACAGAAGAACCTCCACCTCCTGGAACATCGTCCCGGCCAACTGGCAATTCGGTCAAACTTTCACCGGCAAGAACTTCAGAATATGA 783 54.28 RERMAIFIASLACLVSVMWVAEARIPGVYGGGAWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTGALSTALFNSGLSCGACFEIKCANDRQWCHPGSPSIYITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGMRFTINGFQYFNLVLISNVAGAGDIVRVSVKGTRTGWMSMSRNWGQNWQSNAGLVGQALSFRVTGSDRRTSTSWNIVPANWQFGQTFTGKNFRI 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 548069 549181 + Bpe022199.1 Bpe08g00100 106976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00100 260 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Bpe08g00100 260 PRINTS Expansin/Lol pI family signature 33 48 IPR007118 GO:0005576
Bpe08g00100 260 PRINTS Expansin/Lol pI family signature 51 69 IPR007118 GO:0005576
Bpe08g00100 260 PRINTS Expansin/Lol pI family signature 241 255 IPR007118 GO:0005576
Bpe08g00100 260 PRINTS Expansin/Lol pI family signature 149 165 IPR007118 GO:0005576
Bpe08g00100 260 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Bpe08g00100 260 Gene3D - 167 258 IPR036749 -
Bpe08g00100 260 PRINTS Expansin signature 105 115 IPR002963 GO:0009664
Bpe08g00100 260 PRINTS Expansin signature 64 78 IPR002963 GO:0009664
Bpe08g00100 260 PRINTS Expansin signature 241 257 IPR002963 GO:0009664
Bpe08g00100 260 PRINTS Expansin signature 165 177 IPR002963 GO:0009664
Bpe08g00100 260 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Bpe08g00100 260 PRINTS Expansin signature 141 154 IPR002963 GO:0009664
Bpe08g00100 260 PRINTS Expansin signature 212 233 IPR002963 GO:0009664
Bpe08g00100 260 PRINTS Expansin signature 177 198 IPR002963 GO:0009664
Bpe08g00100 260 PRINTS Expansin signature 124 141 IPR002963 GO:0009664
Bpe08g00100 260 PANTHER EXPANSIN 6 259 - -
Bpe08g00100 260 Pfam Expansin C-terminal domain 167 244 IPR007117 -
Bpe08g00100 260 Gene3D - 21 162 IPR036908 -
Bpe08g00100 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 52 166 IPR007112 -
Bpe08g00100 260 PANTHER EXPANSIN-A15 6 259 IPR002963 GO:0009664
Bpe08g00100 260 SUPERFAMILY Barwin-like endoglucanases 33 184 IPR036908 -
Bpe08g00100 260 SUPERFAMILY PHL pollen allergen 163 255 IPR036749 -
Bpe08g00100 260 Pfam Lytic transglycolase 70 156 IPR009009 -
Bpe08g00100 260 SMART dpbb_1 69 156 IPR007112 -
Bpe08g00100 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 255 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00128 Bpe08g00100 CCT
Bpe01g00128 Bpe08g00100 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00100 Bpe-Chr8:548069 Bpe13g01406 Bpe-Chr13:19294928 1.80E-126 dispersed
Bpe01g00128 Bpe-Chr1:758960 Bpe08g00100 Bpe-Chr8:548069 0 wgd
Bpe03g01037 Bpe-Chr3:29712682 Bpe08g00100 Bpe-Chr8:548069 5.60E-168 wgd
Bpe04g01834 Bpe-Chr4:23631699 Bpe08g00100 Bpe-Chr8:548069 3.34E-162 wgd
Bpe04g00743 Bpe-Chr4:4754375 Bpe08g00100 Bpe-Chr8:548069 2.51E-163 wgd
Bpe04g01713 Bpe-Chr4:22972599 Bpe08g00100 Bpe-Chr8:548069 5.87E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00100 - - qsu:112016081 495.352