Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00104 ATGGGTAACGGCGTGGGGAAGCTCGGCGCTTGTTTTTCCGGTGAGGTGGAGGGACGCCATAGCCCATACATATCTGTTTTGCTATCGGATCCTCTCGATGAAGGCTTGGGCCATTCGTTTTGCTACGTTCGACCCGATCCGTCGCTGCTTTCTTCTTCCAAGGTTCATTCGGAGGAAACCACCACTTTCAGTGCAATCTCAGGGGCTTCTGTCAGTGCTAACACGTCTACTCCTCTCTCTACGTCTTTACTTGATCTGTACTCGAACCATACTATTGATCGAGCTGCGGCTTTTGAGAGCTCCACTTCTTTTGCCTCTATTCCTCTGCAACCGATCCCTCGTAATTCTGGCCCGATTTATGGGAATGGCTATTATGGTGGAATTCATTGCTCTGGCCCTCTTGAAAGAGGTTTTCTATCGGGTCCGATTGAGCGAGGATTTATGTCGGGTCCGCTAGATCGTGGTATATTTTCAGGTCCTCTGGAAAAGGCTAGCTCTATTGAGTTTGAGAGGAGCTTCTCTCATGCGGGTTTTGCTTCCAGATCCAGATCAAAAACTAGACGACTAATTCGGATTATTCGGAGAGCCCTTTCGAAGACCGTAACTCGAGGGAGAAACTCTATAGTCGCGCCTATTAAGGCAATGAAAGAACCAGACTGGATTCTCGGACCGGAGAAATACAACGAGAATTTGACGGCGAGCTGTGTAAATTTAAGCAGCGATGGTAGCTTGGAGGACGACGATTCAAAGGGGAGCCAGAATCTGCAGTGGGCTCAAGGGAAAGCCGGAGAGGATCGAGTTCACGTCGTCGTTTCGGAGGAGCACGGCTGGGTTTTCGTCGGAATATACGATGGATTCAACGGACCCGATGCACCCGATTATCTCTTATCAAACTTATACTCTGCCGTACACCAGGAGCTTAAAGGATTATTATGGGACGAAAAGTCTGAACCTTCCGGAGTGGCTGTTCCTATCAGTTCCCCTCCTCAATCTGAAAACACTCATTCAGAAATGGCAGATTCTAAACCAGGTAACAGCGATGATTTTGTCAGGAATCAGGTGGCAGAGGCTTGTTCTCAGTGTTTTGAGCCAGAAAATTCTCCTTGCCCAAGTGGGACAGGGAATTTCGATTCGAATTCAAGAAGAAGAAAGGGTAGAAGTTCAAAAGGAAAGTACCGCGGAGCAGTGAACAAATGGGAGGATAATCAGAGAAGATGGAAGTGCGAATGGGATCGAGAGAGGCAAGAAATTGATCGGAGGTTAAACGAACAGTTAAATCGATCTCATTCTGACGGTATTAGTTCCGTCGATCACGCAGACGTGCTAAAAGCACTGTCTCAGGCGCTAAGGAAGACAGAGGAGGCCTTCTTAGACATTGCAGATAAGATGCTTGTGGAAAGTCCTGTGCTAGCTTTAATGGGATCTTGTCTGCTTGTGATGCTAATGAAAGGAGACGATGTTTATGTAATGAACGTAGGTGATAGTCGGGCGGTTTTAGCTCGAAAGAAACCCAATTATTGGCTCGGGAAAATCTCAAACGATTTGGAAAAGATTAACGAAGAAACGAAGTATGATCTCGAAGGAGTTGACTCTGATCAGACCTATATGGTTTGCAATTTATCCGCATTGCAACTTTCGACTGATCACAGCACGAGCGAGGAAGAGGAAGTTTTGAGGATAAAAAACGAACACCCAGATGATGTTTGTGCCGTGACGAATGATCGGGTGAAGGGTTCGTTGAAGGTTACTCGAGCCTTTGGGGCTGGTTTTCTCAAACAGTCTCATATAGAAAGTGAGGCCATTGATTTGTTTCCTAAATGGAACAATGCACTTCTAGAGATGTTCAGAGTAGATTTTGTAGGAACATCTCCATATATCACTTGCTCTCCCTCTCTCTACCACCATAGACTCGGCTCCAAAGATAGGTTTATGATACTATCTTCTGATGGCCTCTACCAGTACTTCACCAACGAAGAAGCTGTTTCGGAAGTTGAACTTTTCATCCAATTACAACCCGAAGGAGACCCTGCCCAGCATCTCGTCGAGGAAGTCCTCTTTCGGGCTGCGAGAAAAGCTGGTATGGATTTTCATGAATTGCTCGAAATCCCTCTGGGTGATCGGAGGAAATATCACGATGATGTTTCAATTATCGTTATTTCTTTAGAGGGAAGGATTTGGAGATCTTGTGTGTAA 2193 46.1 MGNGVGKLGACFSGEVEGRHSPYISVLLSDPLDEGLGHSFCYVRPDPSLLSSSKVHSEETTTFSAISGASVSANTSTPLSTSLLDLYSNHTIDRAAAFESSTSFASIPLQPIPRNSGPIYGNGYYGGIHCSGPLERGFLSGPIERGFMSGPLDRGIFSGPLEKASSIEFERSFSHAGFASRSRSKTRRLIRIIRRALSKTVTRGRNSIVAPIKAMKEPDWILGPEKYNENLTASCVNLSSDGSLEDDDSKGSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSAVHQELKGLLWDEKSEPSGVAVPISSPPQSENTHSEMADSKPGNSDDFVRNQVAEACSQCFEPENSPCPSGTGNFDSNSRRRKGRSSKGKYRGAVNKWEDNQRRWKCEWDRERQEIDRRLNEQLNRSHSDGISSVDHADVLKALSQALRKTEEAFLDIADKMLVESPVLALMGSCLLVMLMKGDDVYVMNVGDSRAVLARKKPNYWLGKISNDLEKINEETKYDLEGVDSDQTYMVCNLSALQLSTDHSTSEEEEVLRIKNEHPDDVCAVTNDRVKGSLKVTRAFGAGFLKQSHIESEAIDLFPKWNNALLEMFRVDFVGTSPYITCSPSLYHHRLGSKDRFMILSSDGLYQYFTNEEAVSEVELFIQLQPEGDPAQHLVEEVLFRAARKAGMDFHELLEIPLGDRRKYHDDVSIIVISLEGRIWRSCV 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 562872 565628 + Bpe022202.1 Bpe08g00104 106980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00104 730 MobiDBLite consensus disorder prediction 318 348 - -
Bpe08g00104 730 MobiDBLite consensus disorder prediction 323 340 - -
Bpe08g00104 730 MobiDBLite consensus disorder prediction 364 378 - -
Bpe08g00104 730 Pfam Protein phosphatase 2C 415 677 IPR001932 -
Bpe08g00104 730 PANTHER - 12 730 - -
Bpe08g00104 730 PANTHER PROTEIN PHOSPHATASE 2C 12 730 IPR015655 GO:0004722|GO:0006470
Bpe08g00104 730 SUPERFAMILY PP2C-like 261 722 IPR036457 -
Bpe08g00104 730 SMART PP2C_4 248 719 IPR001932 -
Bpe08g00104 730 CDD PP2Cc 414 721 IPR001932 -
Bpe08g00104 730 ProSiteProfiles PPM-type phosphatase domain profile. 247 721 IPR001932 -
Bpe08g00104 730 MobiDBLite consensus disorder prediction 362 393 - -
Bpe08g00104 730 Gene3D - 221 726 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00133 Bpe08g00104 CCT
Bpe01g00133 Bpe08g00104 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00222 Bpe-Chr7:1564661 Bpe08g00104 Bpe-Chr8:562872 7.90E-145 dispersed
Bpe08g00104 Bpe-Chr8:562872 Bpe14g00836 Bpe-Chr14:6277951 4.80E-13 dispersed
Bpe05g00535 Bpe-Chr5:19525110 Bpe08g00104 Bpe-Chr8:562872 2.04E-13 transposed
Bpe01g00133 Bpe-Chr1:781777 Bpe08g00104 Bpe-Chr8:562872 0 wgd
Bpe04g00739 Bpe-Chr4:4735831 Bpe08g00104 Bpe-Chr8:562872 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00104 - - zju:107411109 1067.76