Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00129 ATGGAACATACAGACAACTCGCCCGCGAAGTCATCGTCCCTCGTACCACCTTTTCTGAGAGACTCCCGAGGTTCTCTTGAAGTTTTCAATCCTTCTACGTACTCGTCCACATCTCGGCCGACGAACTCTGTCTTCCGACCGAGCCCGACATGGCAGAGCTGGATCGAGCCGCGTGATCGCTCGGAACCGGAAAATTTCAAGCTTCCATCCATATTAAGTGGGGCCAATGAAGAGATCACCTCATGGATGGCTCTCAAAGACCCTGCCCCAAAGCAATCACCACCACCATCAACGTCGGTTCAGAAGTCTATTGCTTCAATCATCAACGAAAAATTACAGGCGCCGATTGGGAAACCTGCAGACGAAATCGGCAACGCAGCTCAGCGAGCCGCGGAGTGGGGTCTGGTGCTGAAAACAGATACGGCGACCGGAAAGCCTCAAGGAGTCGGGGTGAGAACTTCAGGTGGAGACGAACCGAACATCGGCAAACCGGAGCATTCGAGAAAAACTTCAAACAACTCGCTTAGAAACTCCGGCGACATGTCAGTTGACGGAGGAGGGAGAGAACGAGGGTTTCCGAGAGTCTCAGAGGATTTGAGGGACGCATTGTCGACGTTTCAGCAGACTTTCGTCGTCTCCGACGCGTCGAAACCTGATTATCCGATCATGTATGCGAGCGCCGGATTTTTCAAGATGACGGGTTACACGTCCAAAGAGGTCATCGGAAGAAACTGTCGGTTCATGCAGGGAGCTGATACGGACCCGGGAGATGTGGCGAGGATTAGGGAGGCGTTGCAGGCGGGGACGAGCTACTGTGGGAGGCTATTGAATTATAAGAAAGATGGGACGCCGTTTTGGAATTTACTCACTATTGCACCGATCAAGGATGAGGACGGGAAAGTTCTCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACTGAAGGATATAAAGATCAGACGATGCGTCCAAATGGATTGCCAGAGTCCTTGATTAGATATGATGCTCGTCAAAAAGATGTGGCCAAAAATTCAGTAACTGAACTTGTTCAAGCCATGAAGAGACCACGGTCGCTCAGTGAATCATCAAATCATCGCGTGTTTAGAAAATCAGGTGGAGGCGTGCAAGAGGAAAGACCAGAGCCGCCAGCGAGGAGGAAATCAGAGAGTGTTGCTCCAGCTTTACGAAATTCACAAGGCAGTACTAAAACATCAATGCAAAGTATTAGTGAACTGCCTGAGAAAAAACAAAGAAAATCCATCCGTCTCTCTTTCATGGGGATAATTCGTAAAATTCAGCCGAATAGTGATAGCTTTGGAGATAGCGTAAATATGGATTTTGAGGAGAGTGACGACGACGATTACGACGATGATGAGAGACTTGAGAGTTTTGATGACAAAGTTAGGCAGAGGGAAATGAGAAAGGGTATTGATCTTGCTACAACACTTGAGCGTATCGAGAAGAACTTTGTTATTACTGATCCAAGGCTGCCTGATAATCCTATTATATTTGCTTCCGATAGCTTCTTGGAGCTAACGGAGTACAGCCGAGAAGAAATCTTAGGAAGGAATTGCAGGTTCTTACAAGGGCCAGAGACTGATCGAGGGACTGTAAGGAAGATAAGAGAGGCTATTGACAACCAAACTGAAGTTACAGTGCAGCTCATCAACTACACAAAAAGCGGGAAAAAATTCTGGAACCTGTTTCATCTACAACCTATGCGAGATCAAAAGGGTGAAGTTCAGTATTTCATTGGAGTCCAACTAGATGGGAGTCAACACGTGGAGCCGCTTAAAAATTGTATTCCGGAAGATACTGCGATTGAGAGTGAAAAATTGGTAAGAGAAACAGCAGAAAACGTTGATGTGGCTGTCAGAGAACTTCCAGATGCTAATATGAAACCGGAAGATTTATGGATGAACCATTCCAAAGTTGTTCATCCAAAACCCCATAGGAGAGATACTCCACCTTGGAAAGCTATTCAGAGGATTCAAGATGGTGGTGAAGAGATAGGCTTGAAACATTTTAGGCCAGTTAAACCTTTGGGATCTGGTGATACTGGCAGTGTGCACTTGGTGGAATTGTGTGGGACTGGTCAATTCTTTGCAATGAAGACTATGGATAAGGGAGTTATGCTTAACCGTAATAAGGTGCATAGAGCTTGTGCTGAGAGAGAAATCCTGGACCTATTGGACCATCCTTTTCTTCCTGCTTTATATGCTTCCTTTCAGACAAAAACACATGTTTGTCTGATAACTGATTACTGCCCTGGTGGAGAACTCTTTATGCTTCTCGACAGACAACCAACAAAAGTCCTAAAGGAAGACGCTGCAAGATTTTATGCTGCAGAAGTGGTCATTGCCTTGGAATACCTCCACTGTCAAGGTATAATCTACAGGGACTTGAAGCCTGAAAATGTTTTACTCCAGGGTGACGGCCACGTCTCCTTGACGGATTTTGACTTGTCGTGTTTGACTTCTTGCAAACCTCAGCTTTTGATGCCAACTACAAATGAAAAGAAAAGAAAGCATAAGAAAACTCAACAAGCCCCTATATTTATGGCTGAACCTATGAGAGCATCGAATTCTTTCGTCGGCACGGAAGAATACATAGCTCCGAAAATCCCTCTACTTTCCAACTTATTGCAGGAAATCATAACTGGGGCTGGCCATACTAGTGCTGTGGATTGGTGGGCATTGGGTATTCTTCTATATGAGATGCTGTATGGATATACGCCATTTAGGGGTAAGACTAGGCAGAAAACTTTCGCCAATATTCTACAGAAAGACATAAAATTTCCCAGAAGTACGCAGGCTAGTCTCAGCTGCAAGCAGTTAATATACAGATTATTACACAGGGACCCAAAAAATCGATTGGGATCAAGGGAAGGAGCCGGCGAGATTAAGCGTCATCCTTTTTTCCGCGACGTAAATTGGGCACTCATTCGATCCACGAATGCTCCTGAGCTCGAGGCTCCCCTTCTTGAGACGAAAGACGCAGAGCAGAACGTGAAAGACGACGTAGATCCTGCTCTAGATGATTTGCAAGTCAATATTTTTTGA 3066 45.63 MEHTDNSPAKSSSLVPPFLRDSRGSLEVFNPSTYSSTSRPTNSVFRPSPTWQSWIEPRDRSEPENFKLPSILSGANEEITSWMALKDPAPKQSPPPSTSVQKSIASIINEKLQAPIGKPADEIGNAAQRAAEWGLVLKTDTATGKPQGVGVRTSGGDEPNIGKPEHSRKTSNNSLRNSGDMSVDGGGRERGFPRVSEDLRDALSTFQQTFVVSDASKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGADTDPGDVARIREALQAGTSYCGRLLNYKKDGTPFWNLLTIAPIKDEDGKVLKFIGMQVEVSKHTEGYKDQTMRPNGLPESLIRYDARQKDVAKNSVTELVQAMKRPRSLSESSNHRVFRKSGGGVQEERPEPPARRKSESVAPALRNSQGSTKTSMQSISELPEKKQRKSIRLSFMGIIRKIQPNSDSFGDSVNMDFEESDDDDYDDDERLESFDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRGTVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLKNCIPEDTAIESEKLVRETAENVDVAVRELPDANMKPEDLWMNHSKVVHPKPHRRDTPPWKAIQRIQDGGEEIGLKHFRPVKPLGSGDTGSVHLVELCGTGQFFAMKTMDKGVMLNRNKVHRACAEREILDLLDHPFLPALYASFQTKTHVCLITDYCPGGELFMLLDRQPTKVLKEDAARFYAAEVVIALEYLHCQGIIYRDLKPENVLLQGDGHVSLTDFDLSCLTSCKPQLLMPTTNEKKRKHKKTQQAPIFMAEPMRASNSFVGTEEYIAPKIPLLSNLLQEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILQKDIKFPRSTQASLSCKQLIYRLLHRDPKNRLGSREGAGEIKRHPFFRDVNWALIRSTNAPELEAPLLETKDAEQNVKDDVDPALDDLQVNIF 1021
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 678156 684090 + Bpe022227.1 Bpe08g00129 107005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00129 1021 Pfam Protein kinase domain 680 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00129 1021 SMART pas_2 197 267 IPR000014 -
Bpe08g00129 1021 SMART pas_2 478 547 IPR000014 -
Bpe08g00129 1021 Gene3D Transferase(Phosphotransferase) domain 1 761 995 - -
Bpe08g00129 1021 SMART serkin_6 677 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00129 1021 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Bpe08g00129 1021 ProSiteProfiles PAC domain profile. 269 323 IPR000700 -
Bpe08g00129 1021 MobiDBLite consensus disorder prediction 438 460 - -
Bpe08g00129 1021 ProSiteProfiles PAS repeat profile. 480 549 IPR000014 -
Bpe08g00129 1021 MobiDBLite consensus disorder prediction 26 50 - -
Bpe08g00129 1021 SUPERFAMILY Protein kinase-like (PK-like) 653 995 IPR011009 -
Bpe08g00129 1021 CDD STKc_phototropin_like 675 994 - -
Bpe08g00129 1021 SUPERFAMILY PYP-like sensor domain (PAS domain) 218 308 IPR035965 -
Bpe08g00129 1021 TIGRFAM sensory_box: PAS domain S-box protein 501 591 IPR000014 -
Bpe08g00129 1021 TIGRFAM sensory_box: PAS domain S-box protein 221 315 IPR000014 -
Bpe08g00129 1021 MobiDBLite consensus disorder prediction 1 50 - -
Bpe08g00129 1021 PANTHER FLIPPASE KINASE 1-RELATED 143 1021 - -
Bpe08g00129 1021 Gene3D Phosphorylase Kinase; domain 1 676 1004 - -
Bpe08g00129 1021 MobiDBLite consensus disorder prediction 353 417 - -
Bpe08g00129 1021 CDD PAS 491 591 IPR000014 -
Bpe08g00129 1021 PANTHER PHOTOTROPIN-1 143 1021 - -
Bpe08g00129 1021 Gene3D PAS domain 209 368 - -
Bpe08g00129 1021 MobiDBLite consensus disorder prediction 372 387 - -
Bpe08g00129 1021 MobiDBLite consensus disorder prediction 139 191 - -
Bpe08g00129 1021 SUPERFAMILY PYP-like sensor domain (PAS domain) 492 591 IPR035965 -
Bpe08g00129 1021 Pfam PAS domain 499 591 IPR000014 -
Bpe08g00129 1021 Pfam PAS domain 217 312 IPR000014 -
Bpe08g00129 1021 SMART pac_2 272 314 IPR001610 -
Bpe08g00129 1021 SMART pac_2 553 595 IPR001610 -
Bpe08g00129 1021 ProSiteProfiles PAC domain profile. 550 604 IPR000700 -
Bpe08g00129 1021 MobiDBLite consensus disorder prediction 445 460 - -
Bpe08g00129 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Bpe08g00129 1021 Gene3D PAS domain 464 629 - -
Bpe08g00129 1021 ProSiteProfiles Protein kinase domain profile. 677 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00129 1021 MobiDBLite consensus disorder prediction 393 412 - -
Bpe08g00129 1021 ProSiteProfiles PAS repeat profile. 195 266 IPR000014 -
Bpe08g00129 1021 MobiDBLite consensus disorder prediction 166 180 - -
Bpe08g00129 1021 CDD PAS 222 311 IPR000014 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00158 Bpe08g00129 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00688 Bpe-Chr7:13517015 Bpe08g00129 Bpe-Chr8:678156 0 dispersed
Bpe08g00129 Bpe-Chr8:678156 Bpe14g00766 Bpe-Chr14:5852678 0 dispersed
Bpe13g01006 Bpe-Chr13:15795304 Bpe08g00129 Bpe-Chr8:678156 7.83E-14 dispersed
Bpe13g01219 Bpe-Chr13:17515861 Bpe08g00129 Bpe-Chr8:678156 1.85E-14 dispersed
Bpe01g00158 Bpe-Chr1:914374 Bpe08g00129 Bpe-Chr8:678156 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63438 PF00069 Pkinase 1.40E-58 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00129 K20715 - vvi:100262213 1549.64