Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00129 | ATGGAACATACAGACAACTCGCCCGCGAAGTCATCGTCCCTCGTACCACCTTTTCTGAGAGACTCCCGAGGTTCTCTTGAAGTTTTCAATCCTTCTACGTACTCGTCCACATCTCGGCCGACGAACTCTGTCTTCCGACCGAGCCCGACATGGCAGAGCTGGATCGAGCCGCGTGATCGCTCGGAACCGGAAAATTTCAAGCTTCCATCCATATTAAGTGGGGCCAATGAAGAGATCACCTCATGGATGGCTCTCAAAGACCCTGCCCCAAAGCAATCACCACCACCATCAACGTCGGTTCAGAAGTCTATTGCTTCAATCATCAACGAAAAATTACAGGCGCCGATTGGGAAACCTGCAGACGAAATCGGCAACGCAGCTCAGCGAGCCGCGGAGTGGGGTCTGGTGCTGAAAACAGATACGGCGACCGGAAAGCCTCAAGGAGTCGGGGTGAGAACTTCAGGTGGAGACGAACCGAACATCGGCAAACCGGAGCATTCGAGAAAAACTTCAAACAACTCGCTTAGAAACTCCGGCGACATGTCAGTTGACGGAGGAGGGAGAGAACGAGGGTTTCCGAGAGTCTCAGAGGATTTGAGGGACGCATTGTCGACGTTTCAGCAGACTTTCGTCGTCTCCGACGCGTCGAAACCTGATTATCCGATCATGTATGCGAGCGCCGGATTTTTCAAGATGACGGGTTACACGTCCAAAGAGGTCATCGGAAGAAACTGTCGGTTCATGCAGGGAGCTGATACGGACCCGGGAGATGTGGCGAGGATTAGGGAGGCGTTGCAGGCGGGGACGAGCTACTGTGGGAGGCTATTGAATTATAAGAAAGATGGGACGCCGTTTTGGAATTTACTCACTATTGCACCGATCAAGGATGAGGACGGGAAAGTTCTCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACTGAAGGATATAAAGATCAGACGATGCGTCCAAATGGATTGCCAGAGTCCTTGATTAGATATGATGCTCGTCAAAAAGATGTGGCCAAAAATTCAGTAACTGAACTTGTTCAAGCCATGAAGAGACCACGGTCGCTCAGTGAATCATCAAATCATCGCGTGTTTAGAAAATCAGGTGGAGGCGTGCAAGAGGAAAGACCAGAGCCGCCAGCGAGGAGGAAATCAGAGAGTGTTGCTCCAGCTTTACGAAATTCACAAGGCAGTACTAAAACATCAATGCAAAGTATTAGTGAACTGCCTGAGAAAAAACAAAGAAAATCCATCCGTCTCTCTTTCATGGGGATAATTCGTAAAATTCAGCCGAATAGTGATAGCTTTGGAGATAGCGTAAATATGGATTTTGAGGAGAGTGACGACGACGATTACGACGATGATGAGAGACTTGAGAGTTTTGATGACAAAGTTAGGCAGAGGGAAATGAGAAAGGGTATTGATCTTGCTACAACACTTGAGCGTATCGAGAAGAACTTTGTTATTACTGATCCAAGGCTGCCTGATAATCCTATTATATTTGCTTCCGATAGCTTCTTGGAGCTAACGGAGTACAGCCGAGAAGAAATCTTAGGAAGGAATTGCAGGTTCTTACAAGGGCCAGAGACTGATCGAGGGACTGTAAGGAAGATAAGAGAGGCTATTGACAACCAAACTGAAGTTACAGTGCAGCTCATCAACTACACAAAAAGCGGGAAAAAATTCTGGAACCTGTTTCATCTACAACCTATGCGAGATCAAAAGGGTGAAGTTCAGTATTTCATTGGAGTCCAACTAGATGGGAGTCAACACGTGGAGCCGCTTAAAAATTGTATTCCGGAAGATACTGCGATTGAGAGTGAAAAATTGGTAAGAGAAACAGCAGAAAACGTTGATGTGGCTGTCAGAGAACTTCCAGATGCTAATATGAAACCGGAAGATTTATGGATGAACCATTCCAAAGTTGTTCATCCAAAACCCCATAGGAGAGATACTCCACCTTGGAAAGCTATTCAGAGGATTCAAGATGGTGGTGAAGAGATAGGCTTGAAACATTTTAGGCCAGTTAAACCTTTGGGATCTGGTGATACTGGCAGTGTGCACTTGGTGGAATTGTGTGGGACTGGTCAATTCTTTGCAATGAAGACTATGGATAAGGGAGTTATGCTTAACCGTAATAAGGTGCATAGAGCTTGTGCTGAGAGAGAAATCCTGGACCTATTGGACCATCCTTTTCTTCCTGCTTTATATGCTTCCTTTCAGACAAAAACACATGTTTGTCTGATAACTGATTACTGCCCTGGTGGAGAACTCTTTATGCTTCTCGACAGACAACCAACAAAAGTCCTAAAGGAAGACGCTGCAAGATTTTATGCTGCAGAAGTGGTCATTGCCTTGGAATACCTCCACTGTCAAGGTATAATCTACAGGGACTTGAAGCCTGAAAATGTTTTACTCCAGGGTGACGGCCACGTCTCCTTGACGGATTTTGACTTGTCGTGTTTGACTTCTTGCAAACCTCAGCTTTTGATGCCAACTACAAATGAAAAGAAAAGAAAGCATAAGAAAACTCAACAAGCCCCTATATTTATGGCTGAACCTATGAGAGCATCGAATTCTTTCGTCGGCACGGAAGAATACATAGCTCCGAAAATCCCTCTACTTTCCAACTTATTGCAGGAAATCATAACTGGGGCTGGCCATACTAGTGCTGTGGATTGGTGGGCATTGGGTATTCTTCTATATGAGATGCTGTATGGATATACGCCATTTAGGGGTAAGACTAGGCAGAAAACTTTCGCCAATATTCTACAGAAAGACATAAAATTTCCCAGAAGTACGCAGGCTAGTCTCAGCTGCAAGCAGTTAATATACAGATTATTACACAGGGACCCAAAAAATCGATTGGGATCAAGGGAAGGAGCCGGCGAGATTAAGCGTCATCCTTTTTTCCGCGACGTAAATTGGGCACTCATTCGATCCACGAATGCTCCTGAGCTCGAGGCTCCCCTTCTTGAGACGAAAGACGCAGAGCAGAACGTGAAAGACGACGTAGATCCTGCTCTAGATGATTTGCAAGTCAATATTTTTTGA | 3066 | 45.63 | MEHTDNSPAKSSSLVPPFLRDSRGSLEVFNPSTYSSTSRPTNSVFRPSPTWQSWIEPRDRSEPENFKLPSILSGANEEITSWMALKDPAPKQSPPPSTSVQKSIASIINEKLQAPIGKPADEIGNAAQRAAEWGLVLKTDTATGKPQGVGVRTSGGDEPNIGKPEHSRKTSNNSLRNSGDMSVDGGGRERGFPRVSEDLRDALSTFQQTFVVSDASKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFMQGADTDPGDVARIREALQAGTSYCGRLLNYKKDGTPFWNLLTIAPIKDEDGKVLKFIGMQVEVSKHTEGYKDQTMRPNGLPESLIRYDARQKDVAKNSVTELVQAMKRPRSLSESSNHRVFRKSGGGVQEERPEPPARRKSESVAPALRNSQGSTKTSMQSISELPEKKQRKSIRLSFMGIIRKIQPNSDSFGDSVNMDFEESDDDDYDDDERLESFDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRGTVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLKNCIPEDTAIESEKLVRETAENVDVAVRELPDANMKPEDLWMNHSKVVHPKPHRRDTPPWKAIQRIQDGGEEIGLKHFRPVKPLGSGDTGSVHLVELCGTGQFFAMKTMDKGVMLNRNKVHRACAEREILDLLDHPFLPALYASFQTKTHVCLITDYCPGGELFMLLDRQPTKVLKEDAARFYAAEVVIALEYLHCQGIIYRDLKPENVLLQGDGHVSLTDFDLSCLTSCKPQLLMPTTNEKKRKHKKTQQAPIFMAEPMRASNSFVGTEEYIAPKIPLLSNLLQEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILQKDIKFPRSTQASLSCKQLIYRLLHRDPKNRLGSREGAGEIKRHPFFRDVNWALIRSTNAPELEAPLLETKDAEQNVKDDVDPALDDLQVNIF | 1021 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 678156 | 684090 | + | Bpe022227.1 | Bpe08g00129 | 107005 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00129 | 1021 | Pfam | Protein kinase domain | 680 | 975 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00129 | 1021 | SMART | pas_2 | 197 | 267 | IPR000014 | - | |
Bpe08g00129 | 1021 | SMART | pas_2 | 478 | 547 | IPR000014 | - | |
Bpe08g00129 | 1021 | Gene3D | Transferase(Phosphotransferase) domain 1 | 761 | 995 | - | - | |
Bpe08g00129 | 1021 | SMART | serkin_6 | 677 | 975 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00129 | 1021 | ProSitePatterns | Protein kinases ATP-binding region signature. | 683 | 706 | IPR017441 | GO:0005524 | |
Bpe08g00129 | 1021 | ProSiteProfiles | PAC domain profile. | 269 | 323 | IPR000700 | - | |
Bpe08g00129 | 1021 | MobiDBLite | consensus disorder prediction | 438 | 460 | - | - | |
Bpe08g00129 | 1021 | ProSiteProfiles | PAS repeat profile. | 480 | 549 | IPR000014 | - | |
Bpe08g00129 | 1021 | MobiDBLite | consensus disorder prediction | 26 | 50 | - | - | |
Bpe08g00129 | 1021 | SUPERFAMILY | Protein kinase-like (PK-like) | 653 | 995 | IPR011009 | - | |
Bpe08g00129 | 1021 | CDD | STKc_phototropin_like | 675 | 994 | - | - | |
Bpe08g00129 | 1021 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 218 | 308 | IPR035965 | - | |
Bpe08g00129 | 1021 | TIGRFAM | sensory_box: PAS domain S-box protein | 501 | 591 | IPR000014 | - | |
Bpe08g00129 | 1021 | TIGRFAM | sensory_box: PAS domain S-box protein | 221 | 315 | IPR000014 | - | |
Bpe08g00129 | 1021 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Bpe08g00129 | 1021 | PANTHER | FLIPPASE KINASE 1-RELATED | 143 | 1021 | - | - | |
Bpe08g00129 | 1021 | Gene3D | Phosphorylase Kinase; domain 1 | 676 | 1004 | - | - | |
Bpe08g00129 | 1021 | MobiDBLite | consensus disorder prediction | 353 | 417 | - | - | |
Bpe08g00129 | 1021 | CDD | PAS | 491 | 591 | IPR000014 | - | |
Bpe08g00129 | 1021 | PANTHER | PHOTOTROPIN-1 | 143 | 1021 | - | - | |
Bpe08g00129 | 1021 | Gene3D | PAS domain | 209 | 368 | - | - | |
Bpe08g00129 | 1021 | MobiDBLite | consensus disorder prediction | 372 | 387 | - | - | |
Bpe08g00129 | 1021 | MobiDBLite | consensus disorder prediction | 139 | 191 | - | - | |
Bpe08g00129 | 1021 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 492 | 591 | IPR035965 | - | |
Bpe08g00129 | 1021 | Pfam | PAS domain | 499 | 591 | IPR000014 | - | |
Bpe08g00129 | 1021 | Pfam | PAS domain | 217 | 312 | IPR000014 | - | |
Bpe08g00129 | 1021 | SMART | pac_2 | 272 | 314 | IPR001610 | - | |
Bpe08g00129 | 1021 | SMART | pac_2 | 553 | 595 | IPR001610 | - | |
Bpe08g00129 | 1021 | ProSiteProfiles | PAC domain profile. | 550 | 604 | IPR000700 | - | |
Bpe08g00129 | 1021 | MobiDBLite | consensus disorder prediction | 445 | 460 | - | - | |
Bpe08g00129 | 1021 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 798 | 810 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe08g00129 | 1021 | Gene3D | PAS domain | 464 | 629 | - | - | |
Bpe08g00129 | 1021 | ProSiteProfiles | Protein kinase domain profile. | 677 | 975 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00129 | 1021 | MobiDBLite | consensus disorder prediction | 393 | 412 | - | - | |
Bpe08g00129 | 1021 | ProSiteProfiles | PAS repeat profile. | 195 | 266 | IPR000014 | - | |
Bpe08g00129 | 1021 | MobiDBLite | consensus disorder prediction | 166 | 180 | - | - | |
Bpe08g00129 | 1021 | CDD | PAS | 222 | 311 | IPR000014 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe01g00158 | Bpe08g00129 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe07g00688 | Bpe-Chr7:13517015 | Bpe08g00129 | Bpe-Chr8:678156 | 0 | dispersed | |
Bpe08g00129 | Bpe-Chr8:678156 | Bpe14g00766 | Bpe-Chr14:5852678 | 0 | dispersed | |
Bpe13g01006 | Bpe-Chr13:15795304 | Bpe08g00129 | Bpe-Chr8:678156 | 7.83E-14 | dispersed | |
Bpe13g01219 | Bpe-Chr13:17515861 | Bpe08g00129 | Bpe-Chr8:678156 | 1.85E-14 | dispersed | |
Bpe01g00158 | Bpe-Chr1:914374 | Bpe08g00129 | Bpe-Chr8:678156 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63438 | PF00069 | Pkinase | 1.40E-58 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00129 | K20715 | - | vvi:100262213 | 1549.64 |