Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00135 ATGTTGGATCTTAATCTCAATGTCATCTCGAACGATCCGAATCAGAACGATGAATCTTTTTTGTTGATCGAGAAGCTTCCTCAGGGTTCGGTGAACCAAATGGACGAATCGGAGACATCAAATTCCTCGATTGTCAATGCGGATGCCTCGAGCAATGGATGTGACGAAGACTCGTGCTCTACACGCGCCGATGATGTGGTTGTGACATTGAACTTCGACATTTTGAAGGCTGGGAGGGGGAACGATGTCGTCACGAAGGAGTTCTTTCCTATAACTGGAGCTTCTACCGGAGTCAATGGTGATTTTGGGAATTGGCAGGGGCAGAACTCGGCTTCCCCTTCCTCGTCTTCCAGGAAGAACTGGATCGACTTAGCGTTTGATCAGGGAGGCTCAGGAACTGACTTGAGAGTGGTTCAGCCACAACTACAACAACCGGTGAAAAAAAGCAGGAGGGGACCGAGGTCTCGAAGCTCGCAGTACAGAGGTGTAACGTTTTACCGGAGGACTGGACGATGGGAATCCCATATTTGGTATGTCAACTTGATTAGATTTTCGATTTCACTGGTTTCTATAGCTTATGATCGAGCTGCAATAAAGTTCAGAGGAGTTGATGCAGACATCAATTTTAATCTCAGTGATTATGACGAAGAATTAAAACAGATGAAGAATCTTACCAAGGAAGAATTTGTTCACATACTCCGACGCCAGAGCACAGGCTTTTCAAGGGGGAGCTCGAAATATCGAGGTGTAACACTGCACAAATGTGGTCGATGGGAAGCTAGAATGGGACAGTTCCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGTGAAGTAGAAGCTGCAAGGGCCTATGACAAGGCGGCTATCAAATGTAATGGAAGGGAGGCTGTCACGAATTTTGAGCCTAGCACATATGAGGGGGAAATGATGTCAGAGGGTAGTAACGAAGGCTGCAACAAATTTCTTGATCTAAACTTGGGAATTTCACCTCCTTCACTCGATAATGGTCCCAAGGAAATTGAAGGCCTTCAGTTCAACACTGTTCCCTTTTATGTACGCAATGGAAGGTCTTCAAAGCAGATGGAAAGTCATGCTAATGGAAGGGTTGGTGATCCACCTATGGCCATGAAAGGGCTAGTATTGACACCAGAAAACCTGCCCTTTTGGAACAGTGTGCATCCGACTTACTTTCCCAATGAGACTCATGCAAATCTTATACGAATTGATCTCTTTAGTACTGACAATGATGAATATGACATGGATTATGAGAAAAATTTTTCCCTTGTTACTAAAATGACCACCGTTCGAATGATGATTGATGTTGTCTCTGTTCGTCAATGGAAAATTTCTCAGATGGATGTCAAAAATGTCTTCTTATATAGTGATATTAAAGAATTGGTGAAGTTTATTAAAGCTGAGTATTGTGTCATGGCTACCACCACTTGTGAAATTATTTGGTTACGTTGGTTACTTGGAGATATGAGTATTCTTCTTTGA 1503 43.11 MLDLNLNVISNDPNQNDESFLLIEKLPQGSVNQMDESETSNSSIVNADASSNGCDEDSCSTRADDVVVTLNFDILKAGRGNDVVTKEFFPITGASTGVNGDFGNWQGQNSASPSSSSRKNWIDLAFDQGGSGTDLRVVQPQLQQPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWYVNLIRFSISLVSIAYDRAAIKFRGVDADINFNLSDYDEELKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMMSEGSNEGCNKFLDLNLGISPPSLDNGPKEIEGLQFNTVPFYVRNGRSSKQMESHANGRVGDPPMAMKGLVLTPENLPFWNSVHPTYFPNETHANLIRIDLFSTDNDEYDMDYEKNFSLVTKMTTVRMMIDVVSVRQWKISQMDVKNVFLYSDIKELVKFIKAEYCVMATTTCEIIWLRWLLGDMSILL 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 709353 718696 - Bpe022233.1 Bpe08g00135 107011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00135 500 Gene3D AP2/ERF domain 158 212 IPR036955 GO:0003700|GO:0006355
Bpe08g00135 500 Gene3D AP2/ERF domain 245 304 IPR036955 GO:0003700|GO:0006355
Bpe08g00135 500 SUPERFAMILY DNA-binding domain 158 211 IPR016177 GO:0003677
Bpe08g00135 500 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 406 - -
Bpe08g00135 500 Pfam AP2 domain 245 295 IPR001471 GO:0003700|GO:0006355
Bpe08g00135 500 PRINTS Ethylene responsive element binding protein signature 247 258 IPR001471 GO:0003700|GO:0006355
Bpe08g00135 500 PRINTS Ethylene responsive element binding protein signature 285 305 IPR001471 GO:0003700|GO:0006355
Bpe08g00135 500 ProSiteProfiles AP2/ERF domain profile. 246 303 IPR001471 GO:0003700|GO:0006355
Bpe08g00135 500 SUPERFAMILY DNA-binding domain 245 304 IPR016177 GO:0003677
Bpe08g00135 500 MobiDBLite consensus disorder prediction 31 57 - -
Bpe08g00135 500 CDD AP2 245 305 IPR001471 GO:0003700|GO:0006355
Bpe08g00135 500 MobiDBLite consensus disorder prediction 31 58 - -
Bpe08g00135 500 SMART rav1_2 159 216 IPR001471 GO:0003700|GO:0006355
Bpe08g00135 500 SMART rav1_2 246 309 IPR001471 GO:0003700|GO:0006355
Bpe08g00135 500 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 406 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00135 Bpe-Chr8:709353 Bpe11g00910 Bpe-Chr11:6744803 1.74E-07 dispersed
Bpe01g00162 Bpe-Chr1:959651 Bpe08g00135 Bpe-Chr8:709353 0 wgd
Bpe15g01078 Bpe-Chr15:19991257 Bpe08g00135 Bpe-Chr8:709353 6.10E-12 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21709 PF00847 AP2 3.00E-09 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00135 K09284 - csv:101222024 516.538