Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00146 ATGGAAATTGATCTGAACCATGCAGTGATTGAGGCAGAGAATAATGCATTTTGCAATGGGACTTGCGAGAGAGGGGGCTGTGTCTGTTGTTTGTCATCTTCAACTTCTTCATGTTCTTCAAATTCATCTTCTCCAACTGCTTCGTCCTCCACTTATTTGGAGCTTTGGCATGCTTGTGCTGGCCCTCTTACTTCGCTGCCCAGAAAAGGTAATGTGGTTGTCTATTTCCCTCAAGGTCACCTTGAACAGGCTGCCTCGAACTCTCCTTTCTCTCCCATGGAGGTGCCTTCTTTTAGTCTCCCTCCACAGATCTGCTGCAGGGTTGTAAACAACCAGCTCCTTGCAAACAAAGATAATGATGAGGTCTATACGCAAGTTACTTTGCTCCCTCAACAAGAGTTGGTTGGTGAGACTTTAGCTGGAAAAGAGCTTGAAGAGCTGGCCATGGGAGATGGGAGTGGAGGGCCACCCATAAAAACTACCCCTCATATGTTCTGTAAGACTCTTACAGCTTCTGATACCAGCACTCATGGAGGTTTCTCTGTTCCTCGTCGGGCTGCCGAAGACTGCTTCCCTCCTCTGGATTACAAACAGCAGAGACCCTCTCAAGAACTTGTTACAAAAGATCTGCATGGAGTGGAGTGGAAGTTTCGACATATTTACAGAGGTCAGCCGAGGCGACACTTGCTCACTACCGGGTGGAGTACTTTTGTGAGCCAAAAGAATCTTGTTTCTGGAGATGCAGTGCTCTTCTTAAGAGGGGAAAATGGAGAGCTAAGGTTGGGAATCAGAAGAGCTGTCTGGCCTCGTGGTGGTCTTCCTGACTCAATTTTTGGCAGTCAAAATGCCTATCCCAATGTCATTTCTTCATTGGCTAAAGCGATATCCACCAAGAGCCCGTTTCATGTATTCTACAGTCCAAGGGCAAGTCATGTGCAATTTGTCATACCTTACCAGAAATATATGAAAAGCCTGATTAATCCAGTGACCGTCGGAACAAGATTTAAAATGAAATTTGAAATGGATGACTCACCTGAACGAAGGTGTAGTGGTGTCGTGAGTAATATTGCTGATGTCGATCCTTTTCGATGGCCAAACTCGAAATGGAGATGCTTGATGGTCAGATGGGATGAGGATATCACGAGTGGTCATCGGGAGCGTGTTTCGCCCTGGGAGATCGATACTTCCGTTTCTCTCCTGCCTTTGAGCGTTCAGACTTTTCCAAGGATGAAGAAACTGCGGACAAGTCTGCCAGCCACCCTGCCAACCAACCCCATACCTGGAGGTGGTATTTTGGACTTTGAGGATTCTTTTAGATCCTCTAAGGTCTTGCAAGGTCAAGAAAATGTGAGTTTTACGTCATCACCCTTCAATCGATGTAATGCTGCAAATCGTTCACTCGAGTTTGAGAGACAATCCCAAGTGATTCAAATGAAAAATCCGGGTGAAATGGGAAATTGTAATATTGCTGACTTTGTCAAGGCTCATTCTATTCCTTACATGGGTTTTAAGGATAACTGCAGATATCCGAGGGTCTTGCAAGGTCAAGAAATATTTCCATCGAAGATGCTAACAAAGAAAGCAGAATTCATGGGTCAGCTCAACATTAGTAACAGTTCTTCGAACATGTCTCAATCACGCAAACTTTTATCGGAAGGCACTCAAAACATGTGCATTCCTCATCGTGAAATTTACAAGCGCAGCCAAGATTCTGCCAGGCTTTCTTATATTAACCATTTCTCTCAAGAAGTCTCGTTTAATTCTTCTATGGAGGCTGCGAGTATCCGAAATGATGCTCGAAGGACAGTTTTACCAAATTTGCAAGCGCAAATGGAAGTTCTAAGAAAATCAAACGATGACAATTCTAATGCTATTAGAACTGGTTGTAGACTTTTCGGGGTTTCCCTGACTGAGGAAACAGCTACGAATTCACAGAGTTCTGGGAAGAGAAGTTGCACGAAGGTTCACAAGCAAGGCAGCTTGGTGGGAAGAGCGATCGATCTTGCCAAACTGAATGGCTATGCCGACCTGCTCACTGAACTTGAGCACTTGTTCGGAATGGAAGGCCTCTTAATAGATCCCAACAAAGGGTGGAGGATATTATACACTGACAGCGAAAACGATGTGATGGTTGTCGGAGACGATCCATGGCATGAGTTCTGCAATGAAGTGGCGAAGATCCATATATACACTCAAGAAGAAGTGGAGATGATGACAGTGGGAATACTAAGTGATGATACTCAAAGCTCCTTAGAACAGGCTCCACCCAACACGGAACCATCCAAATCCTCGTCGGTTGGGCAGCCGGATTTGTCCCCGACGGCCGAGAGGGCGTAA 2337 45.36 MEIDLNHAVIEAENNAFCNGTCERGGCVCCLSSSTSSCSSNSSSPTASSSTYLELWHACAGPLTSLPRKGNVVVYFPQGHLEQAASNSPFSPMEVPSFSLPPQICCRVVNNQLLANKDNDEVYTQVTLLPQQELVGETLAGKELEELAMGDGSGGPPIKTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVTKDLHGVEWKFRHIYRGQPRRHLLTTGWSTFVSQKNLVSGDAVLFLRGENGELRLGIRRAVWPRGGLPDSIFGSQNAYPNVISSLAKAISTKSPFHVFYSPRASHVQFVIPYQKYMKSLINPVTVGTRFKMKFEMDDSPERRCSGVVSNIADVDPFRWPNSKWRCLMVRWDEDITSGHRERVSPWEIDTSVSLLPLSVQTFPRMKKLRTSLPATLPTNPIPGGGILDFEDSFRSSKVLQGQENVSFTSSPFNRCNAANRSLEFERQSQVIQMKNPGEMGNCNIADFVKAHSIPYMGFKDNCRYPRVLQGQEIFPSKMLTKKAEFMGQLNISNSSSNMSQSRKLLSEGTQNMCIPHREIYKRSQDSARLSYINHFSQEVSFNSSMEAASIRNDARRTVLPNLQAQMEVLRKSNDDNSNAIRTGCRLFGVSLTEETATNSQSSGKRSCTKVHKQGSLVGRAIDLAKLNGYADLLTELEHLFGMEGLLIDPNKGWRILYTDSENDVMVVGDDPWHEFCNEVAKIHIYTQEEVEMMTVGILSDDTQSSLEQAPPNTEPSKSSSVGQPDLSPTAERA 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 773862 778531 - Bpe022243.1 Bpe08g00146 107022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00146 778 CDD B3_DNA 163 265 IPR003340 GO:0003677
Bpe08g00146 778 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 11 766 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe08g00146 778 Pfam B3 DNA binding domain 165 266 IPR003340 GO:0003677
Bpe08g00146 778 SMART B3_2 165 267 IPR003340 GO:0003677
Bpe08g00146 778 Gene3D - 329 400 - -
Bpe08g00146 778 Gene3D - 163 267 IPR015300 -
Bpe08g00146 778 ProSiteProfiles PB1 domain profile. 650 732 IPR000270 GO:0005515
Bpe08g00146 778 SUPERFAMILY DNA-binding pseudobarrel domain 158 271 IPR015300 -
Bpe08g00146 778 SUPERFAMILY CAD & PB1 domains 651 729 - -
Bpe08g00146 778 Pfam Auxin response factor 292 372 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bpe08g00146 778 Gene3D - 646 739 - -
Bpe08g00146 778 ProSiteProfiles B3 DNA-binding domain profile. 165 267 IPR003340 GO:0003677
Bpe08g00146 778 PANTHER AUXIN RESPONSE FACTOR 11 766 - -
Bpe08g00146 778 MobiDBLite consensus disorder prediction 745 771 - -
Bpe08g00146 778 MobiDBLite consensus disorder prediction 745 778 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00451 Bpe-Chr1:2751459 Bpe08g00146 Bpe-Chr8:773862 5.43E-142 dispersed
Bpe05g01038 Bpe-Chr5:22955782 Bpe08g00146 Bpe-Chr8:773862 1.02E-21 dispersed
Bpe08g00146 Bpe-Chr8:773862 Bpe08g00399 Bpe-Chr8:2446058 1.29E-136 dispersed
Bpe13g01112 Bpe-Chr13:16729661 Bpe08g00146 Bpe-Chr8:773862 8.34E-20 dispersed
Bpe02g00791 Bpe-Chr2:5743427 Bpe08g00146 Bpe-Chr8:773862 9.69E-06 wgd
Bpe04g00699 Bpe-Chr4:4494819 Bpe08g00146 Bpe-Chr8:773862 2.07E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21711 PF02309 AUX_IAA 2.00E-06 CL0072 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00146 - - qsu:112032972 1045.03