Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00221 | ATGTCTGGCTCTCCGGCTCCCAACTCGTCGGAGCGTAAGCCTGAACAGATCGCTCTGTCTCAGAAGCGGCAGCTTCCTTTTTCTTCCATGAAACCGCCATTTGCTGCTTTTGGAGACTATCACCGCTTTGCACCCGACCCTCGCCGAGTCTCCGATCAAGATTCTGAGGGTATTGTGGTTAAATCTCCGCAATTAAAGAGAAAAAGTGGTACGCCAGATTTTGAAGCTGAATCTAGTGATAGAGCTACTGGTCCTGGATTCCTTGAAGTATCCAGCAGCTCTCTTCAAACACCTGGATCGGTAAAAGGAGGAAAAGGAAGCAAATCAAGGCTTACAAAGTGCAGTAGATTGGTACCTCAAACTCCTGTTTCGAACGTAGTGACAGGTTCACCTTCTGGCAATAATCTCGGATCAGCAGGTCCTTGCCGCTATGACAGTTCCCTAGGTCTCTTGACAAAAAAGTTTATCAACCTGATCAAACAAGCAGAAGATGGTATCCTCGACCTGAATAAAGCTGCAGACACATTAGAGGTGCAAAAAAGGCGAATATATGATATAACAAACGTACTTGAAGGAATTGGTCTGATAGAAAAGAAGCTGAAAAACAGAATTCAGTGGAAGGGGCTTGATGTGTCAAGGCCAGGGGATGATGATGGAAATTTTTCTAGCTTACAGGCAGAAGTCGAAAACCTTTCCATTGAGGAGCGTGGATTAGATGAACAAATAAGAGAAATGCAGGAAAGATTAAGAGATCTCAGTGAAAATGACAACAATCAGAGGTGGCTTTTTGTCACTGAAGAAGATATCAAAGGTTTGCCTTGTTTCCAGAATGAAACGTTGATAGCTATTAAGGCTCCACATGGGACTACTTTAGAAGTACCTGATCCTGACGAGGTAACTGAGTTTTTCCATGATAATTTTATTATGTGGCAGGCTGTTGACTATCCCCAAAGGAGGTACAGGATAGTCCTAAGAAGCACTATGGGTCCTATAGATGTCTACCTTGTCAGTCAATTTGAAGAAAAGTTTGAGGAGGTTAATGGTGTTGAAGTGCCTCTGACCACGATCTTACCTTCAACTTCCGGGTACAATGAGCCTCCCATGACAACAATGGAAACAGAAGAAAGTAGAGGGAAGAGTATTGAAATGCAAGAACCCGATGTTCATCAAATGTGCTCAGATCTTAATGCTTCACAGGACTTTGTGGGTGGGATTATGAAGATTGTTCCCTCGGAAGTGGACAGTGACGCTGATTACTGGCTTCTATCAGACGCTGATGTTAGCATTACTGACATGTGGAGAACTGAAACTGGTGTTGAATGGAACGATTTGGGTACACTTCATGAAGATTACCCTATGTCCAGCATTGACGAGATAGCCAATATCAGCTTGCCTCTTCCGCAGGCTTCACCAGCCCCATCTGCGGCAGGTGAATTACCTTCTAGTTCAAACCCTACTGGAAGTTGA | 1467 | 44.1 | MSGSPAPNSSERKPEQIALSQKRQLPFSSMKPPFAAFGDYHRFAPDPRRVSDQDSEGIVVKSPQLKRKSGTPDFEAESSDRATGPGFLEVSSSSLQTPGSVKGGKGSKSRLTKCSRLVPQTPVSNVVTGSPSGNNLGSAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGDDDGNFSSLQAEVENLSIEERGLDEQIREMQERLRDLSENDNNQRWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEVTEFFHDNFIMWQAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEVNGVEVPLTTILPSTSGYNEPPMTTMETEESRGKSIEMQEPDVHQMCSDLNASQDFVGGIMKIVPSEVDSDADYWLLSDADVSITDMWRTETGVEWNDLGTLHEDYPMSSIDEIANISLPLPQASPAPSAAGELPSSSNPTGS | 488 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1229150 | 1234000 | - | Bpe022314.1 | Bpe08g00221 | 107097 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00221 | 488 | Gene3D | - | 139 | 210 | IPR036388 | - | |
Bpe08g00221 | 488 | MobiDBLite | consensus disorder prediction | 465 | 488 | - | - | |
Bpe08g00221 | 488 | Gene3D | - | 218 | 338 | - | - | |
Bpe08g00221 | 488 | MobiDBLite | consensus disorder prediction | 1 | 111 | - | - | |
Bpe08g00221 | 488 | SUPERFAMILY | E2F-DP heterodimerization region | 221 | 338 | IPR037241 | - | |
Bpe08g00221 | 488 | SUPERFAMILY | Winged helix DNA-binding domain | 143 | 206 | IPR036390 | - | |
Bpe08g00221 | 488 | PANTHER | TRANSCRIPTION FACTOR E2FB | 19 | 471 | - | - | |
Bpe08g00221 | 488 | Coils | Coil | 159 | 179 | - | - | |
Bpe08g00221 | 488 | Coils | Coil | 221 | 255 | - | - | |
Bpe08g00221 | 488 | MobiDBLite | consensus disorder prediction | 85 | 103 | - | - | |
Bpe08g00221 | 488 | Pfam | E2F/DP family winged-helix DNA-binding domain | 145 | 208 | IPR003316 | GO:0005667|GO:0006355 | |
Bpe08g00221 | 488 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Bpe08g00221 | 488 | Pfam | E2F transcription factor CC-MB domain | 224 | 337 | IPR032198 | GO:0046983 | |
Bpe08g00221 | 488 | SMART | E2F_TDP_2 | 143 | 208 | IPR003316 | GO:0005667|GO:0006355 | |
Bpe08g00221 | 488 | CDD | E2F_DD | 222 | 338 | IPR032198 | GO:0046983 | |
Bpe08g00221 | 488 | PANTHER | TRANSCRIPTION FACTOR E2F | 19 | 471 | IPR015633 | GO:0000978|GO:0006357 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe01g00263 | Bpe08g00221 | CCT | |
Bpe01g00263 | Bpe08g00221 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00263 | Bpe-Chr1:1579944 | Bpe08g00221 | Bpe-Chr8:1229150 | 0 | wgd | |
Bpe04g00633 | Bpe-Chr4:4015537 | Bpe08g00221 | Bpe-Chr8:1229150 | 2.59E-168 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21720 | PF16421 | E2F_CC-MB | 3.90E-33 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00221 | K06620 | - | csv:101219318 | 695.271 |