Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00289 ATGTGGTCTGCTGCCCCTAGACAAATCAATTACGGCCTTTCACCGGAGATGGGCATGGTGGGTCTACGCGATGTCTTTGTTGTAGCACCCGCCTCCTCTTTCAACCCTAATAATCATATTCATCATCCACATGAAACCATAAATTCCGATCATCACTCCTTTAACAGCTCAAACCCAGCGACGGCCCTCGGAGTTGGCGTCGGCGTTATTCCACTCCTCACTGCGGCTCACCTCGCTCCGCATGGCCTTGTCGGTGAAGATCAAGAGGGTTTGGTGGGTAGAAGCCGAGGTGGTGGAGTTCAGCTATGGCAGAATCCGCAGTTAAACCATGGTCACTACCTGAAGAAACAAGCTCCTTTCGATAATAATAATAATTCTGCAAATTTAGTCCTGAGTGGAGGTGGTAACTTTGGAGGAGCTTCTGTGTCCGAGTCTGCTCCTTCATCGACCTTGACTTGTCAAGACTGTGGAAATCAAGCGAAGAAAGATTGTAGCCATAGGCGTTGCAGAACTTGCTGCCGAAGTCGAGGCTTCGATTGTTCAACTCATGTCAGAAGTACTTGGGTGCCAGCTGCTCGCCGGAGAGAGCGGCAATCAATGACAGTCGGTGCTTCTCCGGCCGCAGGGTCTTCTGCATCGACCTCCGGCGCCAAGAAACCCAGACTCATAACTTCACAAAGAACCACCTCTCATACGTCTACTTCTAACACCACTCCTAGAAGCTTTGACACAAGCTCTAGCCAGCAAGATGTAAGTTTTAAGCAGTCTTTTCCTGGTCAAGTTCGAGCGCCGGCAGTTTTCAAATGCGTTAGGGTGACGGCAGTGGAAGATGGGGAAGACGAGTACGCTTACCAAGCAGTCGTCAAAATCGGCGGCCATGTTTTCAAAGGTTTTTTGTACGATCAAGGTGTAGGATCAAGAGATGGATTTCCAAACATGTCTGAACTACATTTAACCAGTAGAAGTGACGGAACTGCCGGAGATGTCATAGAATCCGGCGAAGGCGGAGGAGGAAGAAATAGAGCCTCATCTGCAGTTCTTAATCATCCCTTGGATGTTTATGCGGCCTCCGGCGGCGGAGGATTGCTTGGAGGTTCTAGCTATGGTAACCCTATGAATTCATAA 1125 49.42 MWSAAPRQINYGLSPEMGMVGLRDVFVVAPASSFNPNNHIHHPHETINSDHHSFNSSNPATALGVGVGVIPLLTAAHLAPHGLVGEDQEGLVGRSRGGGVQLWQNPQLNHGHYLKKQAPFDNNNNSANLVLSGGGNFGGASVSESAPSSTLTCQDCGNQAKKDCSHRRCRTCCRSRGFDCSTHVRSTWVPAARRRERQSMTVGASPAAGSSASTSGAKKPRLITSQRTTSHTSTSNTTPRSFDTSSSQQDVSFKQSFPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVGSRDGFPNMSELHLTSRSDGTAGDVIESGEGGGGRNRASSAVLNHPLDVYAASGGGGLLGGSSYGNPMNS 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1754450 1755675 + Bpe022387.1 Bpe08g00289 107165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00289 374 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 257 304 IPR006511 -
Bpe08g00289 374 MobiDBLite consensus disorder prediction 318 341 - -
Bpe08g00289 374 MobiDBLite consensus disorder prediction 203 253 - -
Bpe08g00289 374 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 17 373 IPR007818 GO:0003700|GO:0006355
Bpe08g00289 374 MobiDBLite consensus disorder prediction 191 253 - -
Bpe08g00289 374 Pfam Domain of unknown function (DUF702) 150 304 - -
Bpe08g00289 374 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 17 373 - -
Bpe08g00289 374 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 152 194 IPR006510 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01311 Bpe08g00289 CCT
Bpe08g00289 Bpe11g00939 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00289 Bpe-Chr8:1754450 Bpe10g00138 Bpe-Chr10:2605842 1.16E-45 dispersed
Bpe11g00939 Bpe-Chr11:6952178 Bpe08g00289 Bpe-Chr8:1754450 1.22E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21728 PF05142 DUF702 1.90E-61 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00289 - - jre:108994634 444.891