Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00291 TTGTCTTTGATTTTTCAGGGAAAGGTGCAAACTAAGGAGGAGACTCAACAAGTACGAAGTGGGGTTTATGGAGGAGTTTGTGCAATATGCTTGAATAAGATAGTTCTTGAAGAAACTGCTCTTATTAAAGGTTGCGAGCACGCCTACTGTGTGACGTGCATCCTTCAGTGGGCTTCATACAGTCAGAAACAAGCTTGCAAATGCCCTCAATGTAAATATCCCTTCGAGTTCCTGAATGTTCATCGAACACTGGATGGAAGGATCCAAGATTACATGTTTGAGGAGAGTGTGTGTCTACTTCTAAGAGCCTCGTGGTTTAAGCCTATGATTGTTGAGGATCGCGAAGAAGGTTATGACGAACATGAAGATTACTTTCAGTATGAAGATGAGGAGGATGAACTTGAGGAAGATTACTTTGATCGCCCATCTTCAAGTCTCCGTATTGGCAATCGAAGATGGGGAGACAGTGGATATGTGAGGGCAGGGCGCCAAGAAGCAAGGCCTGTGTGTCGACAAAATACTCAAGACTCTGGCGCGACCTCTTCCCATGAACCTAAGAGGAAAGAGGCTGAAAATGACAAAATGGGGAGACGAGCAAAAAGGGCGCTTAAGAGAGAAGCTGCGGACAAGGCAGCTGCAGCTAAACATGTGGAACATCTGGCAAGGTTAGGCAGGCAGTGA 681 45.67 LSLIFQGKVQTKEETQQVRSGVYGGVCAICLNKIVLEETALIKGCEHAYCVTCILQWASYSQKQACKCPQCKYPFEFLNVHRTLDGRIQDYMFEESVCLLLRASWFKPMIVEDREEGYDEHEDYFQYEDEEDELEEDYFDRPSSSLRIGNRRWGDSGYVRAGRQEARPVCRQNTQDSGATSSHEPKRKEAENDKMGRRAKRALKREAADKAAAAKHVEHLARLGRQ 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1761176 1763209 + Bpe022389.1 Bpe08g00291 107167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00291 226 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 225 - -
Bpe08g00291 226 SMART ring_2 27 71 IPR001841 -
Bpe08g00291 226 Pfam Ring finger domain 27 72 IPR001841 -
Bpe08g00291 226 ProSiteProfiles Zinc finger RING-type profile. 27 72 IPR001841 -
Bpe08g00291 226 SUPERFAMILY RING/U-box 26 78 - -
Bpe08g00291 226 ProSitePatterns Zinc finger RING-type signature. 45 54 IPR017907 -
Bpe08g00291 226 MobiDBLite consensus disorder prediction 164 226 - -
Bpe08g00291 226 MobiDBLite consensus disorder prediction 181 226 - -
Bpe08g00291 226 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 225 - -
Bpe08g00291 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 96 IPR013083 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00329 Bpe08g00291 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00329 Bpe-Chr1:2053092 Bpe08g00291 Bpe-Chr8:1761176 1.12E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00291 - - hbr:110658728 277.33