Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00302 ATGGGACGAAAAGAAGCGATTTGCTGTGCAGTTGCTATAGCTGCAGTTTTTCTTTCTGTCACTCAGGTTGTCAAGTCGACGACGACGACAATTCCGTCAGACGCATCGGCAGTAGAAAGCTGGTTCTCCCAAAACGTGAAACCGTACAAAGAACGAAGCTCGGAAATCGATCCTGCACTCTCGGCGGCGGAAGACGAAGCAACAGTGGTGAAGGTGGCAAAAGATGGAAGCGGAGATTTCAAGACAGTCACCGACGCGATCAAGAGTATTCCTTCTGGGAATAAGAACCGAGTGATTATTTCGATCGGAGGTGGAGTTTACACCGAGAAAATTAAGATCGATCGAACAAAACCTTTCATCACTTTTTATGGCTCTCCCCAGAATATGCCGACTTTGACATACTCCGGCACCGCTGCTGCTTACGGAACCGTAGACAGCGCCTCCGTGATCGTCGAGTCAGACTACTTCATGGCTGTCAATATCATATTTGCGAATTCTTCTCCGAGGCCAGGTGGGAAGAAAATGGGAGAGCAGGCGGTGGCAATTAGGATCTCCGGCGATAAAGCGGCGTTTTACAACTGTAAAATGGTTGGATATCAAGACACCGTTTGCGACGATAGAGGCAGACATTTCTTCAAGAACTGCGAGATCACCGGAACTGTAGACTTCATTTTCGGAAGTGGCCAATCACTCTACCTGAACACACATATATACGTCGACTTGAAGTACGAAGGATTCACTATAATCACGGCCAACGCGAGGGAGGAAGAATCGGACAAGTCTGGATATTCATTCGTGCATGGGAAGGTAGATGGAAGTGGGACGAACAACACATACTTAGGAAGAGCGTGGAAATCCAGACCGAAGGTTGTCTTCGCCTACACAGACATGTCGGCCGTCGTCATTTCCCCCGGCTGGAGCCTCAACTTCCGTCCCGAAACTGAAAAGACTGTGTATTTTGGAGAGTACCAATGCACGGGGGCAGGCGCCAAGTCTTCCCTCAGAGCCCCGTTCACCAAGGCGTTGACCAGTGCAGAAGTCAAACCCTTTGTCACTTTGGACTACGTGGACGCTTCCAGTTGGCTGCTTCCACCCCCTCATCTCTAA 1107 49.59 MGRKEAICCAVAIAAVFLSVTQVVKSTTTTIPSDASAVESWFSQNVKPYKERSSEIDPALSAAEDEATVVKVAKDGSGDFKTVTDAIKSIPSGNKNRVIISIGGGVYTEKIKIDRTKPFITFYGSPQNMPTLTYSGTAAAYGTVDSASVIVESDYFMAVNIIFANSSPRPGGKKMGEQAVAIRISGDKAAFYNCKMVGYQDTVCDDRGRHFFKNCEITGTVDFIFGSGQSLYLNTHIYVDLKYEGFTIITANAREEESDKSGYSFVHGKVDGSGTNNTYLGRAWKSRPKVVFAYTDMSAVVISPGWSLNFRPETEKTVYFGEYQCTGAGAKSSLRAPFTKALTSAEVKPFVTLDYVDASSWLLPPPHL 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1813253 1814641 + Bpe022399.1 Bpe08g00302 107178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00302 368 ProSitePatterns Pectinesterase signature 2. 217 226 IPR033131 -
Bpe08g00302 368 PANTHER PECTINESTERASE 63-RELATED 35 363 - -
Bpe08g00302 368 SUPERFAMILY Pectin lyase-like 67 362 IPR011050 -
Bpe08g00302 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 363 - -
Bpe08g00302 368 Pfam Pectinesterase 70 357 IPR000070 GO:0030599|GO:0042545
Bpe08g00302 368 Gene3D - 64 364 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00302 Bpe-Chr8:1813253 Bpe09g00075 Bpe-Chr9:528645 6.86E-75 dispersed
Bpe08g00302 Bpe-Chr8:1813253 Bpe06g00594 Bpe-Chr6:16801593 8.79E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00302 K01051 - cit:102610921 450.284