Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00306 | ATGGCAGCTTCTCTCTCTTCCGTGGTACTGGTCGTAGTACTGATGCATCTTCTAGCACCAGCCCTCGTTTCATCTTCCCCAGTTCAAGACCCTGAATTAGTCGTAGAAGAAGTTCTTACGAGCATCAACAATGCCTCCATTAGCAGAAGAAATCTAGCTTCGTGTAGTACAGGCAACCCCATTGATGACTGCTGGAGGTGCGACTCCAATTGGGCGACTAACCGGAAGCGTCTAGCTGATTGTGCCATCGGCTTCGGCAAGGGGGCGATCGGCGGGAGAAATGGAAAGATTTACGTCGTCACTGATCCAACCGACAAAGACCTCGTAAACCCTAAACCAGGCACTCTCCGTTACGCGGTCATACAAGACGAGCCCCTTTGGATCATCTTCAGTCGAGATATGGTCATCAAGCTAAAAGCAGAGCTCATCATGAACTCCTTCAAGACCATCGACGGCCGCGGAGCCAACGTCCACATCGCCGGCGGACCTTGCATTACGATTCAGTACGTGACGAACATCATAATTCACGGAATCAGCATTCACGATTGCAAGGTCGGAGGGAACACCTACGTGAGAGACTCGCCGCATCATTACGGCTGGCGGACGTTGTCAGATGGAGATGGGATTTCGATCTTCGGAGGAAGCTATGTTTGGGTGGACCATTGCTCTCTGTCTAACTGCAAGGACGGTCTGATAGATGCCATTCGTGGATCGACAGCCATAACCATATCTAACAATTACATGACCCATCACAACAAAGTCATGCTCTTAGGCCACAGCGATTCCTACAAACAAGACAAGAACATGCAAGTCACCATAGCTTTCAACCATTTCGGAGAAGGACTAATCCAGAGAATGCCAAGATGCAGACTTGGGTATTTCCACGTCGTGAATAATGACTACACTCATTGGGTCATGTACGCCATCGGCGGTAGCGCAGCTCCGACGATCAACAGCCAAGGCAACAGATTTCTAGCCCCAGACGACGCTGTCCACAAAGAGGTAACGAAGCACGAGAACACAGCGGAGAGAGTATGGAGAAACTGGAACTGGAGATCGCAGGGAGACTTGATGTTAAACGGTGCGTTTTTCACGAGATCTGGATCGGCAGGGTCCTCCAGCTACGCCAAGGCGTCGAGCGTGAGCGCAAGACCGGTGTCGCTAGTGAGATCACTCACCGCCGGCGCCGGCGCCCTTAGATGCAAAAAGGGTTCTCTTTGCTGA | 1224 | 51.31 | MAASLSSVVLVVVLMHLLAPALVSSSPVQDPELVVEEVLTSINNASISRRNLASCSTGNPIDDCWRCDSNWATNRKRLADCAIGFGKGAIGGRNGKIYVVTDPTDKDLVNPKPGTLRYAVIQDEPLWIIFSRDMVIKLKAELIMNSFKTIDGRGANVHIAGGPCITIQYVTNIIIHGISIHDCKVGGNTYVRDSPHHYGWRTLSDGDGISIFGGSYVWVDHCSLSNCKDGLIDAIRGSTAITISNNYMTHHNKVMLLGHSDSYKQDKNMQVTIAFNHFGEGLIQRMPRCRLGYFHVVNNDYTHWVMYAIGGSAAPTINSQGNRFLAPDDAVHKEVTKHENTAERVWRNWNWRSQGDLMLNGAFFTRSGSAGSSSYAKASSVSARPVSLVRSLTAGAGALRCKKGSLC | 407 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1832348 | 1833860 | - | Bpe022402.1 | Bpe08g00306 | 107182 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00306 | 407 | SMART | amb_all | 133 | 330 | IPR002022 | - | |
Bpe08g00306 | 407 | Pfam | Pectate lyase | 141 | 324 | IPR002022 | - | |
Bpe08g00306 | 407 | PANTHER | PECTATE LYASE | 11 | 404 | - | - | |
Bpe08g00306 | 407 | Gene3D | - | 58 | 400 | IPR012334 | - | |
Bpe08g00306 | 407 | SUPERFAMILY | Pectin lyase-like | 42 | 401 | IPR011050 | - | |
Bpe08g00306 | 407 | PRINTS | Pollen allergen Amb family signature | 205 | 226 | IPR018082 | - | |
Bpe08g00306 | 407 | PRINTS | Pollen allergen Amb family signature | 81 | 98 | IPR018082 | - | |
Bpe08g00306 | 407 | PRINTS | Pollen allergen Amb family signature | 285 | 304 | IPR018082 | - | |
Bpe08g00306 | 407 | PRINTS | Pollen allergen Amb family signature | 378 | 401 | IPR018082 | - | |
Bpe08g00306 | 407 | PRINTS | Pollen allergen Amb family signature | 141 | 157 | IPR018082 | - | |
Bpe08g00306 | 407 | PRINTS | Pollen allergen Amb family signature | 349 | 373 | IPR018082 | - | |
Bpe08g00306 | 407 | PRINTS | Pollen allergen Amb family signature | 105 | 130 | IPR018082 | - | |
Bpe08g00306 | 407 | PRINTS | Pollen allergen Amb family signature | 307 | 326 | IPR018082 | - | |
Bpe08g00306 | 407 | PANTHER | PECTATE LYASE 18-RELATED | 11 | 404 | IPR045032 | GO:0030570 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe08g00306 | Bpe-Chr8:1832348 | Bpe15g01045 | Bpe-Chr15:19798888 | 1.12E-177 | dispersed | |
Bpe14g00191 | Bpe-Chr14:2222322 | Bpe08g00306 | Bpe-Chr8:1832348 | 6.13E-166 | dispersed | |
Bpe02g00950 | Bpe-Chr2:8589691 | Bpe08g00306 | Bpe-Chr8:1832348 | 1.20E-146 | transposed | |
Bpe09g00408 | Bpe-Chr9:6572920 | Bpe08g00306 | Bpe-Chr8:1832348 | 0 | transposed | |
Bpe09g00529 | Bpe-Chr9:14060114 | Bpe08g00306 | Bpe-Chr8:1832348 | 0 | transposed | |
Bpe14g01295 | Bpe-Chr14:9892444 | Bpe08g00306 | Bpe-Chr8:1832348 | 0 | transposed | |
Bpe15g00661 | Bpe-Chr15:17324303 | Bpe08g00306 | Bpe-Chr8:1832348 | 0 | transposed | |
Bpe01g00340 | Bpe-Chr1:2143751 | Bpe08g00306 | Bpe-Chr8:1832348 | 5.23E-172 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00306 | K01728 | - | zju:107428464 | 664.455 |