Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00318 ATGGATCTCTTACAGTCTCAAAGGACGGAGATGATAGGCATAGCCATAGCTCTTGCTGCCGTTGGTCTTGGCACCGCCTATTATTTCTATATCATCAAGAAACCCAAAGATTGTTTGGACCCTAATGATTTCAAGGAATTTAAGCTTGTCAAGCGCACCCAACTCAGCCACAATGTGGCTAGTTTCAGATTTGCTCTTCCTACCCCAAACTCAGTCTTGGGCCTTCCGATTGGACAGCATATGAGTTGCAGAGGAAAAGATTGTCTTGGCGAAGAGGTTTGCAAACCATACACTCCAACGACTTTAGATTCAGATATTGGATACTTTGATTTGGTTATAAAGATGTATCCACAAGGAAGGATGTCCCACCACTTCCGGGAGATGCGCGAAGGAGATTATTTGGCTGTAAAGGGACCTAAGGGTCGATTCAAGTATCAGCCGAACCAAGTAAGAGCTTTTGGCATGCTTGCCGGTGGCTCTGGGATCACTCCCATGTTCCAGGTACACAAAGTTGAACTAGTCATTTTGCAGAGTCTTATGACTGCTTCTTGTGGTAACTTTGTAACTCTGCAGGTGGCCAGAGGAATCCTGGAAAATCCAGTTGACAAGACGATTGTGCATCTCATATATGCTAATGTCAAGTATGAAGACATTCTTCTCAAAGAAGAATTAGACCATCTCGTTAGTAGTTTTCCGGGCCGGATCACTGTGTATTACGTTCTGAATGAGCCCCCTCAAGAGTGGGATGGCGGCGTTGGGTTCATATCCAAGGAAATGATTCAAACATTTTGTCCTGCTCCTTCCCCTGATATTCAGATACTGCGGTGTGGGCCACCTCCGATGAACAAGGCCATGGCTGCCCACCTTCAAGAACTGGGATACAGCTCCCAAATGCAGTTCCAGTTTTAA 909 45.54 MDLLQSQRTEMIGIAIALAAVGLGTAYYFYIIKKPKDCLDPNDFKEFKLVKRTQLSHNVASFRFALPTPNSVLGLPIGQHMSCRGKDCLGEEVCKPYTPTTLDSDIGYFDLVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYQPNQVRAFGMLAGGSGITPMFQVHKVELVILQSLMTASCGNFVTLQVARGILENPVDKTIVHLIYANVKYEDILLKEELDHLVSSFPGRITVYYVLNEPPQEWDGGVGFISKEMIQTFCPAPSPDIQILRCGPPPMNKAMAAHLQELGYSSQMQFQF 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1891624 1894313 + Bpe022413.2 Bpe08g00318 107194

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00318 302 Gene3D - 138 301 IPR039261 -
Bpe08g00318 302 Gene3D Translation factors 35 137 - -
Bpe08g00318 302 PRINTS Cytochrome B5 reductase signature 73 84 - -
Bpe08g00318 302 PRINTS Cytochrome B5 reductase signature 95 102 - -
Bpe08g00318 302 PRINTS Cytochrome B5 reductase signature 131 145 - -
Bpe08g00318 302 PRINTS Cytochrome B5 reductase signature 154 173 - -
Bpe08g00318 302 PRINTS Cytochrome B5 reductase signature 272 280 - -
Bpe08g00318 302 Pfam Oxidoreductase NAD-binding domain 155 285 IPR001433 GO:0016491
Bpe08g00318 302 PANTHER NADH-CYTOCHROME B5 REDUCTASE 188 302 IPR001834 GO:0016491
Bpe08g00318 302 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 299 IPR039261 -
Bpe08g00318 302 CDD cyt_b5_reduct_like 47 302 - -
Bpe08g00318 302 SUPERFAMILY Riboflavin synthase domain-like 36 148 IPR017938 -
Bpe08g00318 302 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 171 IPR001834 GO:0016491
Bpe08g00318 302 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Bpe08g00318 302 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 171 - -
Bpe08g00318 302 PANTHER NADH-CYTOCHROME B5 REDUCTASE 188 302 - -
Bpe08g00318 302 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00318 K00326 CYB5R; cytochrome-b5 reductase [EC:1.6.2.2] - zju:107410443 461.07
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01064 Bpe-Chr3:29881682 Bpe08g00318 Bpe-Chr8:1891624 2.05E-152 dispersed
Bpe08g00318 Bpe-Chr8:1891624 Bpe13g01064 Bpe-Chr13:16253587 5.79E-60 dispersed
Bpe08g00318 Bpe-Chr8:1891624 Bpe04g01356 Bpe-Chr4:20146957 1.90E-154 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G53560 69.4 1.5e-52 202.2
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G53560 68.7 3.3e-44 174.5
Bpe14g00928 . 1 137 NADPH P450 reductases AT5G53560 52.6 1.4e-37 152.5
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G48810 63.2 1.6e-49 192.2
Bpe03g00947 . 1 138 NADPH P450 reductases AT5G48810 57.0 9.5e-42 166.4
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G48810 61.5 4.7e-41 164.1
Bpe13g00852 . 22 133 NADPH P450 reductases AT2G32720 81.3 4.5e-49 190.7
Bpe14g00841 . 22 115 NADPH P450 reductases AT2G32720 79.8 2.5e-39 158.3
Bpe13g01364 . 1 128 NADPH P450 reductases AT1G26340 60.4 2.0e-41 165.2
Bpe04g01356 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 4.0e-132 467.6
Bpe03g01064 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 5.2e-132 467.2
Bpe08g00318 . 7 302 NADPH P450 reductases AT5G17770 68.6 5.8e-115 410.6
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G53560 69.4 1.5e-52 202.2
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G53560 68.7 3.3e-44 174.5
Bpe14g00928 . 1 137 NADPH P450 reductases AT5G53560 52.6 1.4e-37 152.5
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G48810 63.2 1.6e-49 192.2
Bpe03g00947 . 1 138 NADPH P450 reductases AT5G48810 57.0 9.5e-42 166.4
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G48810 61.5 4.7e-41 164.1
Bpe13g00852 . 22 133 NADPH P450 reductases AT2G32720 81.3 4.5e-49 190.7
Bpe14g00841 . 22 115 NADPH P450 reductases AT2G32720 79.8 2.5e-39 158.3
Bpe13g01364 . 1 128 NADPH P450 reductases AT1G26340 60.4 2.0e-41 165.2
Bpe04g01356 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 4.0e-132 467.6
Bpe03g01064 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 5.2e-132 467.2
Bpe08g00318 . 7 302 NADPH P450 reductases AT5G17770 68.6 5.8e-115 410.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000880 3 3 2 3 3 2 4 3 2 3 3 3 4 3 3 4 3 4 4 2 3 2 2 3 2 1 1 3 5 3 86
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe08g00318 Bpe_Chr08 FPKM 10.561919 11.509195 0.337162 0.539402 6.210325 6.620923 6.267591 11.407372 9.621135 10.832114