Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00318 ATGGATCTCTTACAGTCTCAAAGGACGGAGATGATAGGCATAGCCATAGCTCTTGCTGCCGTTGGTCTTGGCACCGCCTATTATTTCTATATCATCAAGAAACCCAAAGATTGTTTGGACCCTAATGATTTCAAGGAATTTAAGCTTGTCAAGCGCACCCAACTCAGCCACAATGTGGCTAGTTTCAGATTTGCTCTTCCTACCCCAAACTCAGTCTTGGGCCTTCCGATTGGACAGCATATGAGTTGCAGAGGAAAAGATTGTCTTGGCGAAGAGGTTTGCAAACCATACACTCCAACGACTTTAGATTCAGATATTGGATACTTTGATTTGGTTATAAAGATGTATCCACAAGGAAGGATGTCCCACCACTTCCGGGAGATGCGCGAAGGAGATTATTTGGCTGTAAAGGGACCTAAGGGTCGATTCAAGTATCAGCCGAACCAAGTAAGAGCTTTTGGCATGCTTGCCGGTGGCTCTGGGATCACTCCCATGTTCCAGGTACACAAAGTTGAACTAGTCATTTTGCAGAGTCTTATGACTGCTTCTTGTGGTAACTTTGTAACTCTGCAGGTGGCCAGAGGAATCCTGGAAAATCCAGTTGACAAGACGATTGTGCATCTCATATATGCTAATGTCAAGTATGAAGACATTCTTCTCAAAGAAGAATTAGACCATCTCGTTAGTAGTTTTCCGGGCCGGATCACTGTGTATTACGTTCTGAATGAGCCCCCTCAAGAGTGGGATGGCGGCGTTGGGTTCATATCCAAGGAAATGATTCAAACATTTTGTCCTGCTCCTTCCCCTGATATTCAGATACTGCGGTGTGGGCCACCTCCGATGAACAAGGCCATGGCTGCCCACCTTCAAGAACTGGGATACAGCTCCCAAATGCAGTTCCAGTTTTAA 909 45.54 MDLLQSQRTEMIGIAIALAAVGLGTAYYFYIIKKPKDCLDPNDFKEFKLVKRTQLSHNVASFRFALPTPNSVLGLPIGQHMSCRGKDCLGEEVCKPYTPTTLDSDIGYFDLVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYQPNQVRAFGMLAGGSGITPMFQVHKVELVILQSLMTASCGNFVTLQVARGILENPVDKTIVHLIYANVKYEDILLKEELDHLVSSFPGRITVYYVLNEPPQEWDGGVGFISKEMIQTFCPAPSPDIQILRCGPPPMNKAMAAHLQELGYSSQMQFQF 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1891624 1894313 + Bpe022413.2 Bpe08g00318 107194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00318 302 Gene3D - 138 301 IPR039261 -
Bpe08g00318 302 Gene3D Translation factors 35 137 - -
Bpe08g00318 302 PRINTS Cytochrome B5 reductase signature 73 84 - -
Bpe08g00318 302 PRINTS Cytochrome B5 reductase signature 95 102 - -
Bpe08g00318 302 PRINTS Cytochrome B5 reductase signature 131 145 - -
Bpe08g00318 302 PRINTS Cytochrome B5 reductase signature 154 173 - -
Bpe08g00318 302 PRINTS Cytochrome B5 reductase signature 272 280 - -
Bpe08g00318 302 Pfam Oxidoreductase NAD-binding domain 155 285 IPR001433 GO:0016491
Bpe08g00318 302 PANTHER NADH-CYTOCHROME B5 REDUCTASE 188 302 IPR001834 GO:0016491
Bpe08g00318 302 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 299 IPR039261 -
Bpe08g00318 302 CDD cyt_b5_reduct_like 47 302 - -
Bpe08g00318 302 SUPERFAMILY Riboflavin synthase domain-like 36 148 IPR017938 -
Bpe08g00318 302 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 171 IPR001834 GO:0016491
Bpe08g00318 302 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Bpe08g00318 302 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 171 - -
Bpe08g00318 302 PANTHER NADH-CYTOCHROME B5 REDUCTASE 188 302 - -
Bpe08g00318 302 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01064 Bpe-Chr3:29881682 Bpe08g00318 Bpe-Chr8:1891624 2.05E-152 dispersed
Bpe08g00318 Bpe-Chr8:1891624 Bpe13g01064 Bpe-Chr13:16253587 5.79E-60 dispersed
Bpe08g00318 Bpe-Chr8:1891624 Bpe04g01356 Bpe-Chr4:20146957 1.90E-154 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00318 K00326 - zju:107410443 461.07