Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00332 ATGGTTGTGATGGCGTCTACCATCTTCTCGCCTTCTCTTCTTCTCGTCATTTTCTTCTTCATCGCCCACCTTAACGCCCAGCCCAGCTTCGTTTACCACTTCTGCATAGACCGGCACGGAAACTACACAGCCGACGACGCCTACGGCGTCAACCTCGTCCATCTTCTCTCCGCCATTTCCACCAACGAGAACATCGACTATGGTTTTTACAATTTCTCTCTCGGCCAGAACTTTGATGCTGTTTACGCGATCGGACTTTGCAGAGGCGACATCGACGCTGTCACTTGCCGGAGCTGCCTCAATGACTCTAGATACCTCCTCAAGCAGCGCTGTCCGAATCAGAGGGAAGCTATTGGGTGGTACGGTAACTGTATGTTAAAATACTCCGACCGGAGGATACTTGGATTAATGGAGACTGATCCATCTTACCGATTGTGGGTCACGGATAATGTCACGAACGTGGATCAATATAGCCGAGATCTCAGGACATTGTTAAATGATTTGACAGATACCGCTGCGGGAGGTAACTCTCAGTTAAAATATGCGGCGGGAAGTCGGCCGGCGCCGGATTTCGCGACTATCTACGCTGCCGTACAGTGTACGCCTGATATATCGGAGGTAGAGTGCAGCGCTTGCTTGGATGATGCAATTTGGAAACTTCAACCCCGTTGTTCGACCACTGTTAGAGTGGGTTCCCCTAGTTGTAATATCAGATATGAGGGGTCTCGCTTCTATGGCTCTTCTCCGAATGTCCCGCCGGAATCGTCCCCGCTCCCAGTTTCTCCTCCATCTCCGCCGTCCCTGACCAGTGTAGACGAAGAAGGAAAGAAGAAGAATCCATCTCGAACTGTAATCGCCATAGTTCTGCCGATCGTCGGTGCGTTGGTTGTAATTTCTTTGATTTGTATCATCGTCTATTCAAGAAGGAAGAAAAGCGTCGAAACTGCTGATATAAAAAGGGAAGAATCCTTGCAATTTGTCTTCCAAACCATTAAAGACGCCACGGAGAACTTTTCTGAAGAAAATAAACTTGGACAAGGAGGATTTGGAGCTGTTTACAAGGGAAAGCTTCCCGATGGACAAGACATAGCAGTGAAAAGGCTGGCTCTAAATTCTTCGCAGGGAGACTCAGAATTCAAAAATGAAGTCCTTCTAGTTGCCAAGCTACAACACAGGAATTTAGTAAGACTTCTTGGATTCTGTTTGGAGAGAAAGGAAAGGCTGCTCGTCTACGAGTTCGTTCCGAACGGCAGCCTCGATCATTTCATCCTCGATCCGGTAAAACGCCTCAGGTTGACCTGGGAAAACCGATACGAAATCATCTCGGGGATTGCTCGGGGACTCCTTTACCTGCATCAAGACTCTCAGCTCAAAATTATTCGTCGAGATCTGAAAGCTAGTAATGTATTACTAGATGCAGCTTTGAGACCCAAAATTTCGGATTTCGGCATGGCAAAATTGTTCGCACAAGATCAGACTCAAGGCAAGACATCCAAAATTGCAGGAACATACGGATATATGGCTCCCGAGTATGCAATAGGCGGGAAATTTTCAGCCAAGTCAGATGTATATAGTTTTGGTGTCATGGTTTTGGAGATTGTCACTGGCCTAAGTCAACAGAGATTGATAAACCAAAATGGGGAGACCACAGAACATCTATGCATGGAGAAATTGGAAGGAGGGGGGAGTCATCAATCTTATAGACCCTGTTATGGAAACATGTGTGAAAAATGA 1734 46.89 MVVMASTIFSPSLLLVIFFFIAHLNAQPSFVYHFCIDRHGNYTADDAYGVNLVHLLSAISTNENIDYGFYNFSLGQNFDAVYAIGLCRGDIDAVTCRSCLNDSRYLLKQRCPNQREAIGWYGNCMLKYSDRRILGLMETDPSYRLWVTDNVTNVDQYSRDLRTLLNDLTDTAAGGNSQLKYAAGSRPAPDFATIYAAVQCTPDISEVECSACLDDAIWKLQPRCSTTVRVGSPSCNIRYEGSRFYGSSPNVPPESSPLPVSPPSPPSLTSVDEEGKKKNPSRTVIAIVLPIVGALVVISLICIIVYSRRKKSVETADIKREESLQFVFQTIKDATENFSEENKLGQGGFGAVYKGKLPDGQDIAVKRLALNSSQGDSEFKNEVLLVAKLQHRNLVRLLGFCLERKERLLVYEFVPNGSLDHFILDPVKRLRLTWENRYEIISGIARGLLYLHQDSQLKIIRRDLKASNVLLDAALRPKISDFGMAKLFAQDQTQGKTSKIAGTYGYMAPEYAIGGKFSAKSDVYSFGVMVLEIVTGLSQQRLINQNGETTEHLCMEKLEGGGSHQSYRPCYGNMCEK 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1974714 1977551 + Bpe022427.2 Bpe08g00332 107208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00332 577 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Bpe08g00332 577 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Bpe08g00332 577 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 553 - -
Bpe08g00332 577 Pfam Protein tyrosine and serine/threonine kinase 341 541 IPR001245 GO:0004672|GO:0006468
Bpe08g00332 577 Gene3D Transferase(Phosphotransferase) domain 1 414 572 - -
Bpe08g00332 577 MobiDBLite consensus disorder prediction 246 276 - -
Bpe08g00332 577 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 553 - -
Bpe08g00332 577 SMART serkin_6 338 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00332 577 ProSiteProfiles Protein kinase domain profile. 338 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00332 577 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Bpe08g00332 577 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Bpe08g00332 577 Pfam Salt stress response/antifungal 150 240 IPR002902 -
Bpe08g00332 577 Gene3D - 27 132 IPR038408 -
Bpe08g00332 577 Gene3D - 139 244 IPR038408 -
Bpe08g00332 577 MobiDBLite consensus disorder prediction 252 266 - -
Bpe08g00332 577 SUPERFAMILY Protein kinase-like (PK-like) 317 537 IPR011009 -
Bpe08g00332 577 Gene3D Phosphorylase Kinase; domain 1 301 413 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00368 Bpe-Chr1:2314013 Bpe08g00332 Bpe-Chr8:1974714 0 dispersed
Bpe01g00369 Bpe-Chr1:2331802 Bpe08g00332 Bpe-Chr8:1974714 0 dispersed
Bpe08g00332 Bpe-Chr8:1974714 Bpe11g01168 Bpe-Chr11:8659570 1.20E-92 dispersed
Bpe08g00331 Bpe-Chr8:1970054 Bpe08g00332 Bpe-Chr8:1974714 5.68E-151 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63449 PF07714 PK_Tyr_Ser-Thr 8.00E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00332 - - gmx:102662291 605.52