Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00351 CAAAACTCGGCCAAGATGAACGATCTGTTCTCTAACTCTTTCAAAAAATACGCCGACCTGAAGCAGCAGGCGTACGAAGACGGAATGGAGGCAGGAAACGAGACTGTAAATCTCGATAAATTCTTTGAAGACGTTGAGAATGTGAAGGAAGACATGAAACAGGTGGAAAAGCTCTACAAGAAACTACAAGAAGCAAATGAAGAAAGCAAAGTAGTCCACAACGCCAAAACCATGAAAGAATTGAGAGCAAGAATGGATCAAGATGTCAGCCAGGTCTTAAGAAGAGTCAAAGTGGTCAAAGGAAAGCTCGAAGCTCTTGATCGATCGAACGCGTCTCATCGGAGCCTTCCCGGGTGCGGTCCCGGCTCGTCTGCCGATAGAACAAGAACCTCAGTGGTGAGTGGATTGGGGAAGAAACTTAAAGACACCATGGATGATTTTCAGAGCTTAAGAGCTAGAATGAATGCAGAATACAAGGAAACAGTAGAACGCAGGTATTTCACAATCACGGGAGAGAAGGCAAATGAAGAAACAATTGAGACTCTGATATCTAGCGGAGAAAGCGAAAATTTTATGCAGAAAGCGATTCAAGAACAGGGTAGAGGCCAAATAATGGACACAATATCAGAAATACAAGAAAGGCACGATGCAGTGAAGGAGATAGAGAAGAACCTGATTGAGCTGCACCAGATATTTCTGGACATGGCTGCACTTGTGGAGGCGCAGGGGCATCAGCTTAACGACATAGAGAGTCACGTTGCACATGCTAATTCGTTTGTCCGGCGAGGCACTGAGCAACTGCAGGAGGCCAGAGAACAGCAGAAAAGCTCGAGGAAATGGACGTGCATTGCTGTAATTCTCGGCGCCGTTCTCGTTGCCGTTCTGCTCTTCCCGCTTTTGACGTCGATTTTGCCCCACTTGATGTAG 927 46.28 QNSAKMNDLFSNSFKKYADLKQQAYEDGMEAGNETVNLDKFFEDVENVKEDMKQVEKLYKKLQEANEESKVVHNAKTMKELRARMDQDVSQVLRRVKVVKGKLEALDRSNASHRSLPGCGPGSSADRTRTSVVSGLGKKLKDTMDDFQSLRARMNAEYKETVERRYFTITGEKANEETIETLISSGESENFMQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQIFLDMAALVEAQGHQLNDIESHVAHANSFVRRGTEQLQEAREQQKSSRKWTCIAVILGAVLVAVLLFPLLTSILPHLM 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2103594 2104520 + Bpe022445.1 Bpe08g00351 107227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00351 308 SMART SynN_4 33 159 IPR006011 GO:0016020
Bpe08g00351 308 CDD SynN 38 195 IPR006011 GO:0016020
Bpe08g00351 308 SMART tSNARE_6 203 270 IPR000727 -
Bpe08g00351 308 SUPERFAMILY t-snare proteins 37 263 IPR010989 GO:0016020|GO:0016192
Bpe08g00351 308 Gene3D - 196 300 - -
Bpe08g00351 308 CDD SNARE_syntaxin1-like 207 269 - -
Bpe08g00351 308 MobiDBLite consensus disorder prediction 111 132 - -
Bpe08g00351 308 Pfam SNARE domain 245 296 IPR000727 -
Bpe08g00351 308 Coils Coil 38 75 - -
Bpe08g00351 308 PANTHER T-SNARE-RELATED 12 300 - -
Bpe08g00351 308 Pfam Syntaxin 40 243 IPR006011 GO:0016020
Bpe08g00351 308 ProSitePatterns Syntaxin / epimorphin family signature. 214 253 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bpe08g00351 308 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 208 270 IPR000727 -
Bpe08g00351 308 Gene3D - 38 165 - -
Bpe08g00351 308 PANTHER SYNTAXIN 12 300 IPR045242 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00700 Bpe-Chr2:4746882 Bpe08g00351 Bpe-Chr8:2103594 3.27E-113 dispersed
Bpe03g01190 Bpe-Chr3:30806605 Bpe08g00351 Bpe-Chr8:2103594 7.08E-126 dispersed
Bpe04g00619 Bpe-Chr4:3961756 Bpe08g00351 Bpe-Chr8:2103594 3.70E-125 dispersed
Bpe04g01486 Bpe-Chr4:21389123 Bpe08g00351 Bpe-Chr8:2103594 4.14E-118 dispersed
Bpe07g00604 Bpe-Chr7:12739294 Bpe08g00351 Bpe-Chr8:2103594 3.40E-61 dispersed
Bpe07g00425 Bpe-Chr7:4783671 Bpe08g00351 Bpe-Chr8:2103594 2.05E-67 transposed
Bpe15g00424 Bpe-Chr15:15775983 Bpe08g00351 Bpe-Chr8:2103594 1.14E-65 transposed
Bpe01g00396 Bpe-Chr1:2457994 Bpe08g00351 Bpe-Chr8:2103594 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00351 K08486 - csv:101217140 518.85