Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00351 | CAAAACTCGGCCAAGATGAACGATCTGTTCTCTAACTCTTTCAAAAAATACGCCGACCTGAAGCAGCAGGCGTACGAAGACGGAATGGAGGCAGGAAACGAGACTGTAAATCTCGATAAATTCTTTGAAGACGTTGAGAATGTGAAGGAAGACATGAAACAGGTGGAAAAGCTCTACAAGAAACTACAAGAAGCAAATGAAGAAAGCAAAGTAGTCCACAACGCCAAAACCATGAAAGAATTGAGAGCAAGAATGGATCAAGATGTCAGCCAGGTCTTAAGAAGAGTCAAAGTGGTCAAAGGAAAGCTCGAAGCTCTTGATCGATCGAACGCGTCTCATCGGAGCCTTCCCGGGTGCGGTCCCGGCTCGTCTGCCGATAGAACAAGAACCTCAGTGGTGAGTGGATTGGGGAAGAAACTTAAAGACACCATGGATGATTTTCAGAGCTTAAGAGCTAGAATGAATGCAGAATACAAGGAAACAGTAGAACGCAGGTATTTCACAATCACGGGAGAGAAGGCAAATGAAGAAACAATTGAGACTCTGATATCTAGCGGAGAAAGCGAAAATTTTATGCAGAAAGCGATTCAAGAACAGGGTAGAGGCCAAATAATGGACACAATATCAGAAATACAAGAAAGGCACGATGCAGTGAAGGAGATAGAGAAGAACCTGATTGAGCTGCACCAGATATTTCTGGACATGGCTGCACTTGTGGAGGCGCAGGGGCATCAGCTTAACGACATAGAGAGTCACGTTGCACATGCTAATTCGTTTGTCCGGCGAGGCACTGAGCAACTGCAGGAGGCCAGAGAACAGCAGAAAAGCTCGAGGAAATGGACGTGCATTGCTGTAATTCTCGGCGCCGTTCTCGTTGCCGTTCTGCTCTTCCCGCTTTTGACGTCGATTTTGCCCCACTTGATGTAG | 927 | 46.28 | QNSAKMNDLFSNSFKKYADLKQQAYEDGMEAGNETVNLDKFFEDVENVKEDMKQVEKLYKKLQEANEESKVVHNAKTMKELRARMDQDVSQVLRRVKVVKGKLEALDRSNASHRSLPGCGPGSSADRTRTSVVSGLGKKLKDTMDDFQSLRARMNAEYKETVERRYFTITGEKANEETIETLISSGESENFMQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQIFLDMAALVEAQGHQLNDIESHVAHANSFVRRGTEQLQEAREQQKSSRKWTCIAVILGAVLVAVLLFPLLTSILPHLM | 308 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2103594 | 2104520 | + | Bpe022445.1 | Bpe08g00351 | 107227 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00351 | 308 | SMART | SynN_4 | 33 | 159 | IPR006011 | GO:0016020 | |
Bpe08g00351 | 308 | CDD | SynN | 38 | 195 | IPR006011 | GO:0016020 | |
Bpe08g00351 | 308 | SMART | tSNARE_6 | 203 | 270 | IPR000727 | - | |
Bpe08g00351 | 308 | SUPERFAMILY | t-snare proteins | 37 | 263 | IPR010989 | GO:0016020|GO:0016192 | |
Bpe08g00351 | 308 | Gene3D | - | 196 | 300 | - | - | |
Bpe08g00351 | 308 | CDD | SNARE_syntaxin1-like | 207 | 269 | - | - | |
Bpe08g00351 | 308 | MobiDBLite | consensus disorder prediction | 111 | 132 | - | - | |
Bpe08g00351 | 308 | Pfam | SNARE domain | 245 | 296 | IPR000727 | - | |
Bpe08g00351 | 308 | Coils | Coil | 38 | 75 | - | - | |
Bpe08g00351 | 308 | PANTHER | T-SNARE-RELATED | 12 | 300 | - | - | |
Bpe08g00351 | 308 | Pfam | Syntaxin | 40 | 243 | IPR006011 | GO:0016020 | |
Bpe08g00351 | 308 | ProSitePatterns | Syntaxin / epimorphin family signature. | 214 | 253 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
Bpe08g00351 | 308 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 208 | 270 | IPR000727 | - | |
Bpe08g00351 | 308 | Gene3D | - | 38 | 165 | - | - | |
Bpe08g00351 | 308 | PANTHER | SYNTAXIN | 12 | 300 | IPR045242 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00700 | Bpe-Chr2:4746882 | Bpe08g00351 | Bpe-Chr8:2103594 | 3.27E-113 | dispersed | |
Bpe03g01190 | Bpe-Chr3:30806605 | Bpe08g00351 | Bpe-Chr8:2103594 | 7.08E-126 | dispersed | |
Bpe04g00619 | Bpe-Chr4:3961756 | Bpe08g00351 | Bpe-Chr8:2103594 | 3.70E-125 | dispersed | |
Bpe04g01486 | Bpe-Chr4:21389123 | Bpe08g00351 | Bpe-Chr8:2103594 | 4.14E-118 | dispersed | |
Bpe07g00604 | Bpe-Chr7:12739294 | Bpe08g00351 | Bpe-Chr8:2103594 | 3.40E-61 | dispersed | |
Bpe07g00425 | Bpe-Chr7:4783671 | Bpe08g00351 | Bpe-Chr8:2103594 | 2.05E-67 | transposed | |
Bpe15g00424 | Bpe-Chr15:15775983 | Bpe08g00351 | Bpe-Chr8:2103594 | 1.14E-65 | transposed | |
Bpe01g00396 | Bpe-Chr1:2457994 | Bpe08g00351 | Bpe-Chr8:2103594 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00351 | K08486 | - | csv:101217140 | 518.85 |