Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00375 ATGGAAGAAGACGCCAATTCTTGGTTAAGGAGAACGAAATTTTCTCACACCGTTTATCATCGATTGGATTTGTTGAAATATGCTCCAGTTCCTATCACTTTTGAGCCCACTCGGAATTTGCAGTTTAGATCAAGGCCGCAAATCCCAACCTCCGATCACAATTTGGGTACCTGTAGTTCTCAAATTTATGGGAAACCGAAGCACAGGTCTTTGTCTCCCCTTCCCAAGAACAAACTCTCCCACGAATTTAAGGAAGCACAGTCTGATCGGAAGCGGTTTTCATCTCCATGTCCTCGCCAAAGAGAACTTGAGAAGCAGAAAATTGAAAAGACCAAATCATCCGAATTGATGTCTCTTTCGAGTACGAACCTTTTGAAGCATTTTGTTTCAAATAAAGGGCAGGAAAAGTCCAAACCGAGAAAGGAATCTGGGTGGACTAAGTATTTTGATTATGGTGGAGGTAGGGTTACTGCTGTGGAAGCAGCTGACGAGTGTAGTGTTGATCTGTCCAAGCTGTTTCTCGGTCTAAGGTTTGCCCATGGAGCTCACAGCCGACTCTACCATGGAGTCTACAATGACGAAGCAGTCGCTGTAAAGATTACCAGAGTTCCAGATGATGATGAAAATGGAGTTCTAGGAGCTCGACTGGAGAAGCAATATAGCAGAGAAGTCTCTCTACTCTCTCGTCTCCACCATCCAAATGTGATAAAGTTTACAGCAGCCTGTAGAGAGCCGCCGGTCTATTGTATCATCACGGAATATCTCCAAGAGGGATCACTGAGGGCATATTTGCACAAACAAGAGAGAAAACCTCTTCCTTTACGAAAACTTATCGAATTTGCATTGGATATTTCTCGAGGGATGGAATTCATTCACTCCAAAGGTGTCATTCATCGGGATCTAAAGCCCGAGAATGTTCTCATCGATCAAGAATTCCACCTAAAAGTTGCCGATTTTGGTATAGCTTGTGAAGAGGCATATTGTGATGCTCTGGCTGACGATCCGGGGACTTACCGGTGGATGGCTCCGGAGATGATCAAACACAAATCTTATGGTCGGAAAGTTGATGTCTACAGTTTTGGTCTCATCTTGTGGGAAATGGTCGCCGGAGCTATTCCCTACGAGGACATGACACCAATCCAAGCCGCCTTTGCCGTAGTGAATAAGAATCTTAGACCGGTAATTCCGGACGGCTGCCCACGCCCAATGAGAGCGCTGATCGAACACTGTTGGTCAGTGGAGCCGGAAAAGAGGCCGGAGTTTTGGCAAGTGGTTAAGGTTTTGGAGCAATTCGAAAGGTCTCTCGCGCAGGACGGGACTTTGAATCTGGTGCAGAACCTGAGTCCTAGTTGCCATGATCACAAGAAAAGGCTTCTCCAATGGATTCAAAAGCTGGGAGCATTCAAACACTCGGCACAAACCTAA 1425 45.75 MEEDANSWLRRTKFSHTVYHRLDLLKYAPVPITFEPTRNLQFRSRPQIPTSDHNLGTCSSQIYGKPKHRSLSPLPKNKLSHEFKEAQSDRKRFSSPCPRQRELEKQKIEKTKSSELMSLSSTNLLKHFVSNKGQEKSKPRKESGWTKYFDYGGGRVTAVEAADECSVDLSKLFLGLRFAHGAHSRLYHGVYNDEAVAVKITRVPDDDENGVLGARLEKQYSREVSLLSRLHHPNVIKFTAACREPPVYCIITEYLQEGSLRAYLHKQERKPLPLRKLIEFALDISRGMEFIHSKGVIHRDLKPENVLIDQEFHLKVADFGIACEEAYCDALADDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGAIPYEDMTPIQAAFAVVNKNLRPVIPDGCPRPMRALIEHCWSVEPEKRPEFWQVVKVLEQFERSLAQDGTLNLVQNLSPSCHDHKKRLLQWIQKLGAFKHSAQT 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2291971 2293580 - Bpe022469.1 Bpe08g00375 107251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00375 474 Pfam Protein tyrosine and serine/threonine kinase 178 428 IPR001245 GO:0004672|GO:0006468
Bpe08g00375 474 CDD STKc_MAP3K-like 179 428 - -
Bpe08g00375 474 Gene3D Phosphorylase Kinase; domain 1 161 256 - -
Bpe08g00375 474 MobiDBLite consensus disorder prediction 83 113 - -
Bpe08g00375 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Bpe08g00375 474 ProSiteProfiles Protein kinase domain profile. 172 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00375 474 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 453 - -
Bpe08g00375 474 SMART serkin_6 172 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00375 474 PRINTS Tyrosine kinase catalytic domain signature 252 265 IPR001245 GO:0004672|GO:0006468
Bpe08g00375 474 PRINTS Tyrosine kinase catalytic domain signature 399 421 IPR001245 GO:0004672|GO:0006468
Bpe08g00375 474 PRINTS Tyrosine kinase catalytic domain signature 290 308 IPR001245 GO:0004672|GO:0006468
Bpe08g00375 474 PRINTS Tyrosine kinase catalytic domain signature 336 346 IPR001245 GO:0004672|GO:0006468
Bpe08g00375 474 PRINTS Tyrosine kinase catalytic domain signature 355 377 IPR001245 GO:0004672|GO:0006468
Bpe08g00375 474 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 453 - -
Bpe08g00375 474 SUPERFAMILY Protein kinase-like (PK-like) 164 428 IPR011009 -
Bpe08g00375 474 Gene3D Transferase(Phosphotransferase) domain 1 257 466 - -
Bpe08g00375 474 MobiDBLite consensus disorder prediction 83 112 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00375 Bpe-Chr8:2291971 Bpe15g00632 Bpe-Chr15:17134552 1.08E-106 dispersed
Bpe13g00223 Bpe-Chr13:10248231 Bpe08g00375 Bpe-Chr8:2291971 2.51E-08 dispersed
Bpe11g00643 Bpe-Chr11:4953706 Bpe08g00375 Bpe-Chr8:2291971 1.04E-26 transposed
Bpe11g01151 Bpe-Chr11:8536815 Bpe08g00375 Bpe-Chr8:2291971 0 transposed
Bpe02g01606 Bpe-Chr2:18939425 Bpe08g00375 Bpe-Chr8:2291971 2.12E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63451 PF07714 PK_Tyr_Ser-Thr 7.60E-61 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00375 - - qsu:112022930 678.707