Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00393 ATGGAGTCTCGCGTGCTATCACGCGCAATCGCATTCGCCGGAATTCCTCCACTCCGAAAGCTGCAGAGAGAGAGTAGCAGCCACATATGTTTAGTGTCATCTCGGTCGATTGGCGACGGAGGAAACCTACTGTGGGGAAGGCAACTCCGTCCTGCTCTGCTAATCGAGCACTCTCCAGCCGGACTTGTAGGATCGAATAAGAGAGAGATTCTTCGGCCGTGCCTCGCTGCTGCCTCCTCACCCGCTGGAGGGAGCGATTCCGCTGGGGAAGGGAAAGTTGCTCCGGTGGGATTTTTTAACAAGTATCCGGCTCTTGTCACCGGCTTCTTTTTCTTCATGTGGTATCTTCTCTGCAGGTACTTTCTGAACGTCATCTTCAACATCATTAACAAGAAGATCTATAATTACTTCCCTTACCCTTATTTTGTCTCGGTCGTTCATTTGTTTGTCGGGGTGGTCTATTGTTTGTTAAGCTGGGCTGTTGGCCTTCCTAAGCGTGCTCCCATTGATTCGAATCTCTTGAAGCTTCTCATTCCTGTAGCTTTCTGTCATGCCCTTGGCCACGTGACAAGCAATGTCTCCTTTGCTGCTGTTGCTGTCTCCTTCACTCATACTATTAAAGCTCTCGAACCTTTCTTCAATGCTGCTGCTTCTCAGTTCATACTTGGACAGGCGATACCTCTATCTTTATGGCTTTCATTGGCCCCTGTTGTTATTGGTGTCTCAATGGCATCATTGACTGAACTCTCATTCAATTGGCTTGGCTTCATTAGTGCTATGATTTCCAACATCTCTTTTACTTACAGGAGTATTTACTCAAAGAAAGCCATGACTGGCATGGACAGCACAAATGTGTATGCCTACATTTCCATAATTGCTCTTCTTTTCTGTTTACCTCCTGCTGCCATTATAGAGGGCCCTCAGCTGCTTAAGCATGGATTTAATGATGCAATTGCTAAAGTTGGTCTTAATAAGTTGCTCTTGGATCTCTTCTGGGTAGGATTGTTTTATCATCTCTACAATCAGTTGGCCACCAACACCCTGGAGAGGGTGGCTCCTTTAACTCATGCTGTTGGCAACGTGTTGAAACGAGTATTCGTGATTGGTTTCTCCATCATTGTCTTTGGTAACAAAATTTCAACTCAAACTGGAATTGGAACATGCATTGCGATTGCAGGCGTGGCACTTTACTCCTTGATTAAAGCCAAGTTGGAAGAAGAGAAACAAGTGAGTTTAGCCTCTGACTCCGGTCTATTCATTAATGTTCATGGCCAATTGAAATTTTCAAGAAAATCGCTTTCCCTATGCATCTGGCTGTCCCCATCTCGGAGATGA 1335 45.62 MESRVLSRAIAFAGIPPLRKLQRESSSHICLVSSRSIGDGGNLLWGRQLRPALLIEHSPAGLVGSNKREILRPCLAAASSPAGGSDSAGEGKVAPVGFFNKYPALVTGFFFFMWYLLCRYFLNVIFNIINKKIYNYFPYPYFVSVVHLFVGVVYCLLSWAVGLPKRAPIDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQAIPLSLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTGMDSTNVYAYISIIALLFCLPPAAIIEGPQLLKHGFNDAIAKVGLNKLLLDLFWVGLFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTCIAIAGVALYSLIKAKLEEEKQVSLASDSGLFINVHGQLKFSRKSLSLCIWLSPSRR 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2416427 2419252 - Bpe022488.1 Bpe08g00393 107269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00393 444 SUPERFAMILY Multidrug resistance efflux transporter EmrE 153 247 - -
Bpe08g00393 444 PANTHER BNAC02G47130D PROTEIN 36 416 - -
Bpe08g00393 444 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 105 408 IPR004696 GO:0016021|GO:0022857|GO:0055085
Bpe08g00393 444 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 399 - -
Bpe08g00393 444 PANTHER SOLUTE CARRIER FAMILY 35 36 416 - -
Bpe08g00393 444 Pfam Triose-phosphate Transporter family 107 398 IPR004853 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00445 Bpe08g00393 CCT
Bpe01g00445 Bpe08g00393 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00393 Bpe-Chr8:2416427 Bpe11g00531 Bpe-Chr11:4110881 6.28E-69 dispersed
Bpe01g00445 Bpe-Chr1:2724580 Bpe08g00393 Bpe-Chr8:2416427 0 wgd
Bpe02g01639 Bpe-Chr2:19182316 Bpe08g00393 Bpe-Chr8:2416427 2.02E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00393 K15283 - csv:101220728 638.262