Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00399 ATGGGTGGTCTGATCGATCTGAACACGGCCGACGACGATGACACTCCATCTTTTGGTGGTTCCCCTGCTTCGTCTTCATCTGCTTCTGGTTCTTCTTCTTCTTCGGCTTCTATTTGCTTGGAGTTGTGGCACGCCTGCGCAGGTCCAGCTATTTCACTGCCGAAAAAAGGCAGCGTGGTCGTGTATTTGCCGCAAGCTCACTTGGAAATAGTCCAAGATTTTCCCATTACCGCCATTGATCTTCCTCCTCACATCTTCTGTCGTGTTCTCGATGTTCAACTCCATGCGGAGGCGGGTACTGATGAGGTTCACGCTCGAGTTTCTCTAATTCCTGAAAGTCAGAACTTTGAGAAGAAACTGCAAGAAGGGGAAATCGATGCCGATGGTAGCGAAGACGATTTCGAAGCGGCAGTGAAGTCGACAACGCCTCATATGTTCTGCAAGACTCTCACTGCTTCAGACACCAGCACTCACGGCGGGTTCTCTGTCCCTCGCCGAGCGGCCGAAGATTGCTTTCCTGCGTTGGACTATAATCAACAGAGGCCTTCACAAGAGCTCATGGCAAAGGATCTTCACGGGTTGGAATGGCGGTTCCGACACATTTATCGAGCAGGGCAGCCAAGAAGACATTTGCTCACTACTGGATGGAGTGCATTTGTAAACAAGAAAAAGCTGACCTCCGGCGACGCAGTCCTATTTCTTAGGGGTGAAGATGGTGACTTGAGACTCGGAATTAGAAGAGCATCTCAGATCAAAATCGGGTCTCCTCTTCCCGGTTTGTGCAGCCAGCAGCCAAGCCACTGCAATATTCGAAATATCATTGATTCTATAACGACGAGAAGTGTATTCAGTGTTCGATGCAATCCAAGGACCGATTTGTCAGAGTTAATTATACCTCTGCCTAGATTTTTGAAGAGCATTAACCAATATTTCTCCATCGGGACGAGGTTTAAGCTGTGTTTCGAGACAGAGGATGCTGCAGAACGAAGGGCAGTTGTTTCGAGAAATGTTGTATTGGAATATTGCATGAACGAGTCGGTTTTCACTCTTGGCAGATGCACAGGTCGAATAGCTGGAATTAGCGATGTGGATCCAATGAGATGGCCCGGCTCTAAGTGGAGATGTTTAGTGGTGAGGTGGGACGAAGCGGAAACTAATAGACATGGCAGGGTTTCTCCATGGGAGATCAAGCCATCTGGGTCTCCTTGTGGATCGAACGGCATGGTCATACCTGGTTTGAAGAGGACAAGGATCCAATTGTCTTCAGACAGAACCGAGTTTCTGATTCCTAGTGGGATTGGGCAATCGGACATTGAGGAATCTCTAAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATTTCGGGTTTTGATCTTTCGATTGATGGTTTGAGAAATAAAAATCAACGACCATCCGAAAGAAGGATGTTTTCTTCTCAAAGCATAGGCATTCCGGAGTCTCATGGATTCCCAAAGCTCATGCAAGGCCAAGAAATATTTCCGAGCCGTCCATACCGAACAACCGCACCAACTCCCGATGAGGCTCGAGGTAACGGTGGACGATTAATCTTCAATGGTGTTCGAGTTCCTAACTCTAAACACGGATGGCCTCGCTCGATGCATGTATCAAATTTGGACAAGCGAGTATCGTCTTCGACTTCGACTGCGACTGCTCAGGCGTCTTCGCCATCTTCTGTGTTGATGTTTCAACAAGCAATCAATCAAGCTCCAGCCTATAGTTCAGTCTACAACAACGGAAAAACTTCTCACTTTACAAATGGTGTAAAGTTATCGTCTTTATCAGACAATCGATTAAGAAAAGCAGTCCAGTCGGAGGTCGATGATCAACTAGCTCAACCCGGATCGAGTTTCAGCGGAAATCTGAGCAAAACAAACTGCAGGCTATTCGGGTTTTCCTTAACAGAAGGAAAGCCGGTTTCCCAAATGGAGAAGGCCTTCAATGCCATCCAAAACCTCCATTGA 1980 47.27 MGGLIDLNTADDDDTPSFGGSPASSSSASGSSSSSASICLELWHACAGPAISLPKKGSVVVYLPQAHLEIVQDFPITAIDLPPHIFCRVLDVQLHAEAGTDEVHARVSLIPESQNFEKKLQEGEIDADGSEDDFEAAVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPALDYNQQRPSQELMAKDLHGLEWRFRHIYRAGQPRRHLLTTGWSAFVNKKKLTSGDAVLFLRGEDGDLRLGIRRASQIKIGSPLPGLCSQQPSHCNIRNIIDSITTRSVFSVRCNPRTDLSELIIPLPRFLKSINQYFSIGTRFKLCFETEDAAERRAVVSRNVVLEYCMNESVFTLGRCTGRIAGISDVDPMRWPGSKWRCLVVRWDEAETNRHGRVSPWEIKPSGSPCGSNGMVIPGLKRTRIQLSSDRTEFLIPSGIGQSDIEESLRFQKVLQGQEISGFDLSIDGLRNKNQRPSERRMFSSQSIGIPESHGFPKLMQGQEIFPSRPYRTTAPTPDEARGNGGRLIFNGVRVPNSKHGWPRSMHVSNLDKRVSSSTSTATAQASSPSSVLMFQQAINQAPAYSSVYNNGKTSHFTNGVKLSSLSDNRLRKAVQSEVDDQLAQPGSSFSGNLSKTNCRLFGFSLTEGKPVSQMEKAFNAIQNLH 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2446058 2449512 - Bpe022494.2 Bpe08g00399 107275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00399 659 MobiDBLite consensus disorder prediction 543 562 - -
Bpe08g00399 659 CDD B3_DNA 144 247 IPR003340 GO:0003677
Bpe08g00399 659 MobiDBLite consensus disorder prediction 14 31 - -
Bpe08g00399 659 Gene3D - 144 248 IPR015300 -
Bpe08g00399 659 PANTHER AUXIN RESPONSE FACTOR 3 30 650 - -
Bpe08g00399 659 Pfam B3 DNA binding domain 146 248 IPR003340 GO:0003677
Bpe08g00399 659 Gene3D - 310 404 - -
Bpe08g00399 659 MobiDBLite consensus disorder prediction 501 520 - -
Bpe08g00399 659 MobiDBLite consensus disorder prediction 1 31 - -
Bpe08g00399 659 MobiDBLite consensus disorder prediction 533 562 - -
Bpe08g00399 659 ProSiteProfiles B3 DNA-binding domain profile. 146 249 IPR003340 GO:0003677
Bpe08g00399 659 Pfam Auxin response factor 276 331 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bpe08g00399 659 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 30 650 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe08g00399 659 SMART B3_2 146 249 IPR003340 GO:0003677
Bpe08g00399 659 SUPERFAMILY DNA-binding pseudobarrel domain 139 248 IPR015300 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00451 Bpe08g00399 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00146 Bpe-Chr8:773862 Bpe08g00399 Bpe-Chr8:2446058 1.29E-136 dispersed
Bpe08g00399 Bpe-Chr8:2446058 Bpe11g01233 Bpe-Chr11:9210760 4.18E-94 dispersed
Bpe01g00451 Bpe-Chr1:2751459 Bpe08g00399 Bpe-Chr8:2446058 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21738 PF02362 B3 7.10E-21 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00399 K14486 - zju:107412017 700.664