Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00442 ATGGCTCTTGTTATGCACAAAGATTCATTAGACAAGCAGATGGATTCTGGCAAGTATGTGAGATATACACCAGAGCAGGTTGAAGCCTTAGAGAGGGTTTATACTGAATGTCCAAAGCCTAGCTCTTTAAGGAGGCAACAGCTCATTAGGGAGTGTCCTATTCTCTCCAATATTGAGCCTAAACAAATCAAAGTTTGGTTTCAGAATCGCAGATGCCGTGAGAAGCAGAGAAAAGAATCTTCTCGTCTTCAAACTGTGAACAGAAAGTTGAATGCCATGAACAAACTCTTAATGGAAGAGAATGATCGCTTGCAGAAGCAGGTCTCTCAGCTGGTTTATGATAATGGGTATATGCGTCAGCAACTGCATAGTGCGTCTGGAACGACCACAGACAATAGCTGTGAGTCTGTGGTCATGAGTGGTCAGCACCAACAACCGCAAAACCCAACGCCTAAGCGTCCTGAATGGGATGCTACAAGCCCAGCTGGTCTTCTGGCGATAGCAGAGGAGACCCTGGCGGAGTTCCTTTCCAAGGCTACAGGAACTGCTGTCGACTGGGTACAGATGATTGGGATGAAGCCTGGTCCGGATTCCATTGGAATTGTTGCTGTTTCTCGTAACTGCCGTGGAGTAGCAGCACGAGCTTGTGGTCTAGTCAGTCTAGAGCCCACTAAAGTTGCTGAAATCTTGAAAGATCGTCCTTCATGGTTTCGCGACTGCCGATCTATTGATATACTAAATGTAATTCCTGCCAGAAATGGAGGGACAATAGAGCTCATATATATGCAGCAGACTTATGCTCCTACGACATTGGCCGCAGCTCGAGACTTCTGGACATTACGATATACCACTAATTTAGATGATGGCAGCCTCGTGGTATGCGAGAGATCTTTGAATTCCTCAACTGGTGGTCCCACAGGGCCACCTACTTCGGGTTTTGCAAGAGCTGAAATGCTTCCCAGCGGATGTTTAGTCCGTGCTTGTGAGGGTGGCGGGTCAATTATTCACATTGTTGATCATATTGATTTTGATGTTTGGAGTGTACCTGAAGTTGTAAGGCCTCTTTATGAATCATCCAAGATTTTTGCTCAGAAGATGACCATATCCGCCCTCCGGCATGTCAGACAAATCGCTCAAGAGTTTAACGGTGAATATCAACTCGGCAGCGGTCGCCAGCCTGCTGTTTTAAGGACATTCAGTCAGAAACTGTGCAGGGGATTCAATGATGCCATTAATGGATTTGTCGATGATGGTTGGTCCCTTATGGGAAGCGATGGAGTGGAGGATGTCACCATTATGATCAATTCATCGCCAAATAAATTTTTCAATACCCAATATGGCAGCATTGCAATATGTACGAGTTTTGATGGGGGCGTGTTATGTGCCAAGGCATCCATGCTATTGCAGAACGTTCCCCCTGCTTTGCTCGTTCGTTTCTTGAGGGAGCATCGCTCCGAGTGGGCTGATTATGGGGTGGATGCCTACTCTGCCGCATGTATTAAGGCCAACCCTTGTTCAGTCCCTTGTCTCAAGCCTGGTGGCTTACCTAGTAGCCAAGTTATTCTTCCTCTTGCTCATACTGTCGAACACGAAGAGATCTTGGAGGTGCTTCGGCTTGAGGGTCATGCATTTCCTTCTGACGATGGTTTGACGGGACGGGATATGTACTTATTGCAGCTATGTAGTGGGGTTGATGAGAACTCCGTTGGCTCCTGTGCCCAACTTGTTTTTGCTCCTATCGATGAATCGTTTGCCGATGATGCCCCCCTGCTGCCCTCTGGTTTTCGGGACATGGCTGGGGCCGGCTCTGCCACTCGCACTTTGGATTTGGCTTCTACCCTTGAAGTGCGGCCTTGTGGTGCTCATTCTGGCATCAAAGTGGATTCAGATGGCTACAACCTTCGATCTGTATTGACAATTGCTTTCCAATTTGCTTTTGAGAGTCACATGCGAGACAGTGTTGCAGCCATGGCCCGACAGTATGTTCGAAATGTCGTGGGGTCTGTACAGCGGGTGGCTATGTCCATTGCTCCTCCCACGAGTTCCCTCATAAGCTCTAAACCCCTTTCAGTTTCTCCTGAAGCTGTTACTTTGGCCCGATGGATTTGCCAAAGTTACAGAATACACGTGGGTGAGGAGCTCCTTCGGACTGATTCACAATCGAGGGATGGTATACTAAAGCAACTTTGGCACCATTCCCATGCAATTATGTGCTGCTCGGCGAAAACTAATGCATCGTCCATTTTCACCTTTGCCAACCAGGCTGGCCTCGACATGCTGGAAACTACTCTAGTTGCTCTCCAAGATATAATGCTCGACAAGATTCTTGATGAAGCTGGCCGGAAAATTCTCTGCTTGGATTTCTCCAAGATAATGCAGCAGGGATTTGTTCATCTGCCTGCCGGAATTTGCACGTCGAGCATGGGCAGGCCAGTAACGTACGAGCACGCCATTACTTGGAAAGTCCTCGACGACGAAGCCTTGAATCACTGCCTGGCTTTTATGTTCATCAACTGGTCTTTTGTATGA 2529 47.69 MALVMHKDSLDKQMDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVYDNGYMRQQLHSASGTTTDNSCESVVMSGQHQQPQNPTPKRPEWDATSPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCRGVAARACGLVSLEPTKVAEILKDRPSWFRDCRSIDILNVIPARNGGTIELIYMQQTYAPTTLAAARDFWTLRYTTNLDDGSLVVCERSLNSSTGGPTGPPTSGFARAEMLPSGCLVRACEGGGSIIHIVDHIDFDVWSVPEVVRPLYESSKIFAQKMTISALRHVRQIAQEFNGEYQLGSGRQPAVLRTFSQKLCRGFNDAINGFVDDGWSLMGSDGVEDVTIMINSSPNKFFNTQYGSIAICTSFDGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACIKANPCSVPCLKPGGLPSSQVILPLAHTVEHEEILEVLRLEGHAFPSDDGLTGRDMYLLQLCSGVDENSVGSCAQLVFAPIDESFADDAPLLPSGFRDMAGAGSATRTLDLASTLEVRPCGAHSGIKVDSDGYNLRSVLTIAFQFAFESHMRDSVAAMARQYVRNVVGSVQRVAMSIAPPTSSLISSKPLSVSPEAVTLARWICQSYRIHVGEELLRTDSQSRDGILKQLWHHSHAIMCCSAKTNASSIFTFANQAGLDMLETTLVALQDIMLDKILDEAGRKILCLDFSKIMQQGFVHLPAGICTSSMGRPVTYEHAITWKVLDDEALNHCLAFMFINWSFV 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2791068 2796146 + Bpe022539.1 Bpe08g00442 107318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00442 842 CDD homeodomain 18 78 IPR001356 GO:0003677
Bpe08g00442 842 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 842 IPR044830 GO:0003700
Bpe08g00442 842 SMART HOX_1 15 81 IPR001356 GO:0003677
Bpe08g00442 842 Coils Coil 83 107 - -
Bpe08g00442 842 Pfam MEKHLA domain 697 841 IPR013978 -
Bpe08g00442 842 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 842 - -
Bpe08g00442 842 MobiDBLite consensus disorder prediction 124 158 - -
Bpe08g00442 842 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Bpe08g00442 842 CDD bZIP 70 109 - -
Bpe08g00442 842 Gene3D - 185 380 IPR023393 -
Bpe08g00442 842 ProSiteProfiles START domain profile. 157 386 IPR002913 GO:0008289
Bpe08g00442 842 CDD START_ArGLABRA2_like 161 378 - -
Bpe08g00442 842 SUPERFAMILY Homeodomain-like 18 79 IPR009057 -
Bpe08g00442 842 Pfam START domain 167 376 IPR002913 GO:0008289
Bpe08g00442 842 SMART START_1 166 377 IPR002913 GO:0008289
Bpe08g00442 842 MobiDBLite consensus disorder prediction 124 154 - -
Bpe08g00442 842 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Bpe08g00442 842 SUPERFAMILY Bet v1-like 167 379 - -
Bpe08g00442 842 Gene3D - 11 84 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00400 Bpe-Chr4:2516029 Bpe08g00442 Bpe-Chr8:2791068 0 dispersed
Bpe08g00442 Bpe-Chr8:2791068 Bpe10g00665 Bpe-Chr10:13226686 0 dispersed
Bpe01g00484 Bpe-Chr1:3005518 Bpe08g00442 Bpe-Chr8:2791068 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21741 PF01852 START 1.30E-46 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00442 K09338 - jre:108996578 1373.61