Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00448 TTAAGTTCGACAATGGAGGGTCTTCTGAGTAAAGGGGTTTTTTGTGGGCAAGAACAAATAGAGCAACTTTCGAGAGATGATAGCCATTACAGTTTGACTACTGGTGTTTTGCCGCCGCTTGGAGCCAGAAGCAACCGGAGAGCCAAGCTCCGGCGGTTTGTTATTTCGCCGTATGACCGCAGATACAGGTTGTGGGAGACATTTCTCATTGTTCTTGTGGTCTATACGGCTTGGGCATCGCCTTTTGAATTAGGATTTCTGAAAAAACCAGAGGGTCCACTCGCGATTATTGATAATGTTGTTAATGGTTTTTTTGCCATTGACATTGTTCTCACATTCTTTGTTGCTTACTTGGAAAAAACCACCTATCTGCTTGTTGATGAACCAAAGAAGATTGCTTGGAAATATACAAGTTCTTGGTTAACCTTTGATGTCATTTCCACTATTCCTTCTGAAGTTGCCGCGAAGATCTTCCCTTCCCCATTTCAATCTTATGGCTTCTTCAACATGCTTCGCCTTTGGCGTCTCCGTCGAGTTAGCAAGCTTTTCTCGAGATTGGAGAAGGATAGACATTATAACTACTTCTGGGTCAGATGTGCAAAGCTTGTTTGTGTTACCCTTTTCGCGGTTCATACCGCAGGATGCTTCTACTATCTACTTGCAGCCAGGTATCGTGACCCGAAAAGGACATGGATTGGCCAATCAAACGAGAATTTCCTTGAAGAAAGCTTGTGGATCAGATATGTCACTTCCATTTATTGGTCTATCACTACTCTTACAACTGTTGGATATGGTGATTTGCATCCAGTGAATATAAGGGAAATGATTTTCGACATATTCTATATGCTTTTCAATCTTGGTTTGACTGCATACTTGATCGGAAATATGACCAACTTGGTTGTTCATGGGACCAGTCGAACTCGGAGATTCGTAAGTAAAATTATTAAAAAAATTTCTTGTTTTTTGTCGAATTGTTTGAAATTTATGTTTTTGTCTGGTTTGCAGAGAGACACTATACAAGCTGCTTCTAGTTTTGCTCAGAGGAATCAACTTCCTCCACGCTTGCAGGATCAAATGCTTGCACATTTGTGTTTGAAGTTTAGAACAGATTCAGAAGGACTTCAACAGCAGGAAACTCTCGACTCTCTTCCCAAAGCCATCCGATCTAGCATTTCGCATTATCTGTTCTACTCTCTCGTCGATAAAGTCTACTTATTTCGTGGCGTCTCAAATGACTTGCTCTTCCAACTGGTCTCGGAGATGAAAGCCGAGTATTTTCCTCCGAAAGAAGATGTCATCTTGCAAAATGAAGCCCCTACCGACTTCTATATTCTTGTCACCGGAGCTGATCTACTTGTTCTGAAAAATGGGGTGGAACACGTTGTGAGAGAGGCGAAATCGGGCGATCTCTGTGGTGAAATAGGAGTTCTTTGTTATCGACCTCAGTTATTCACAGTTCGAACGAAGCGATTGAGCCAACTTTTGCGATTAAATCGTACAACTTTCTTGAACATTGTACAAGCAAACGTCGGTGATGGAACGATCATAATGAACAATCTCCTTCAGCATTTGAAGGAACACAAGGACCCAATAATGGAGGGCATTTTGCTGGAGACAGAGAACATGTTAGCTCGAGGGCGAATGGACCTACCTCTCAGTCTTTGCTTTGCGGCCATGAGAGGAGATGATTTGCTCTTGCACCAGCTTCTGAAAAGAGGGTTGGATCCTAATGAATCTGACAATAATGGCAGATCAGCTCTGCACATTGCAGCATCCAAAGGAAGTGAAAACTGTGTTCTTCTGCTGCTTGATTATGGTGCGGATCCAAATTGTAGAGATTCTGAGGGGAATGTACCGCTATGGGAAGCCATAGCCGCCGGCCATGAACAAGTAGTCCAGCTTCTCAAAGACAACGGAGCAAATCTAGAGAGCGGAGACATGGGCCAATTCGCATGCGCCGCCACCGAGCAGAACGATTTGACTCTCCTCAAGGAAATCGTCCGGCACGGCGGTAACGTCACTGTTCCGAAGAGCAACGGCACTACTGCCCTCCACGTTGCCGTCTGCGAAGACAACGTCGTAATCGTTAAGTTTCTCCTCGCCCACGGCGCCGGAGTCGATATCCCGGATATTCACGGATGGACTCCTAGAGATTTGGCCGATCAACAGGGCCACGAAGAAATCAATGCCCTTTTCGCTCCTCACAAACAGCCCAAGGCCCAGTCTGTCGTTGCCATTTTCGACGGGCAAAGAGAAAATCGTTTCCTCGGAAGGTTCAAAAGCGAGCCGGTGATTCGTCCTCTTCCGACGGAAGTCTCTTTCGCCGGCGGAGACTGGAGCAACCACCGGCCGCGGCGGAAAACTAGTAACTTCCACAACTCATTGTTCGGAATAATGACATCAGCGAACTCCGGGGATAGAGACCTCTTCTCGATGAGTCAAACGGAGAATGCTCTGATTTCAGACGGCAATCCGGTGAGAGTGACGATTAGTTTCCCAGAGATCGGAGAAGTGAAAGGGAAGCTGGTGCTTTTGCCGGGGACGATGAAGGAGCTAATGGAGATGGGGAAAAAGAAATTCGGGGTGGAAGCGGTCAGAGTTGTGAGCAAAGAAGGAGCTGAAATAGATGATATAGAAGTAATAAGGGACGGCGATAAGCTTGAGTTTGTTGGCGACGGCGACGGAAGGAGGAAATGTATTGAGAGGAATGGCGGATTTCTAGCTTCGTGCGCATCAATTTGA 2742 45.7 LSSTMEGLLSKGVFCGQEQIEQLSRDDSHYSLTTGVLPPLGARSNRRAKLRRFVISPYDRRYRLWETFLIVLVVYTAWASPFELGFLKKPEGPLAIIDNVVNGFFAIDIVLTFFVAYLEKTTYLLVDEPKKIAWKYTSSWLTFDVISTIPSEVAAKIFPSPFQSYGFFNMLRLWRLRRVSKLFSRLEKDRHYNYFWVRCAKLVCVTLFAVHTAGCFYYLLAARYRDPKRTWIGQSNENFLEESLWIRYVTSIYWSITTLTTVGYGDLHPVNIREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRRFVSKIIKKISCFLSNCLKFMFLSGLQRDTIQAASSFAQRNQLPPRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGADLLVLKNGVEHVVREAKSGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKEHKDPIMEGILLETENMLARGRMDLPLSLCFAAMRGDDLLLHQLLKRGLDPNESDNNGRSALHIAASKGSENCVLLLLDYGADPNCRDSEGNVPLWEAIAAGHEQVVQLLKDNGANLESGDMGQFACAATEQNDLTLLKEIVRHGGNVTVPKSNGTTALHVAVCEDNVVIVKFLLAHGAGVDIPDIHGWTPRDLADQQGHEEINALFAPHKQPKAQSVVAIFDGQRENRFLGRFKSEPVIRPLPTEVSFAGGDWSNHRPRRKTSNFHNSLFGIMTSANSGDRDLFSMSQTENALISDGNPVRVTISFPEIGEVKGKLVLLPGTMKELMEMGKKKFGVEAVRVVSKEGAEIDDIEVIRDGDKLEFVGDGDGRRKCIERNGGFLASCASI 913
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2841352 2845937 + Bpe022545.1 Bpe08g00448 107324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00448 913 PANTHER POTASSIUM CHANNEL AKT1 336 894 IPR045319 GO:0005249|GO:0006813
Bpe08g00448 913 PANTHER POTASSIUM CHANNEL AKT1 17 321 IPR045319 GO:0005249|GO:0006813
Bpe08g00448 913 SMART cnmp_10 405 521 IPR000595 -
Bpe08g00448 913 SUPERFAMILY Ankyrin repeat 553 735 IPR036770 -
Bpe08g00448 913 ProSiteProfiles Ankyrin repeat profile. 615 647 IPR002110 GO:0005515
Bpe08g00448 913 ProSiteProfiles Ankyrin repeat region circular profile. 615 646 - -
Bpe08g00448 913 Pfam KHA, dimerisation domain of potassium ion channel 827 887 IPR021789 -
Bpe08g00448 913 Gene3D - 550 733 IPR036770 -
Bpe08g00448 913 SUPERFAMILY Voltage-gated potassium channels 57 301 - -
Bpe08g00448 913 ProSiteProfiles cAMP/cGMP binding motif profile. 405 506 IPR000595 -
Bpe08g00448 913 ProSiteProfiles Ankyrin repeat profile. 679 711 IPR002110 GO:0005515
Bpe08g00448 913 ProSiteProfiles Ankyrin repeat profile. 582 614 IPR002110 GO:0005515
Bpe08g00448 913 Gene3D Jelly Rolls 369 529 IPR014710 -
Bpe08g00448 913 CDD CAP_ED 405 509 IPR000595 -
Bpe08g00448 913 Gene3D - 64 301 - -
Bpe08g00448 913 ProSiteProfiles Ankyrin repeat region circular profile. 679 710 - -
Bpe08g00448 913 ProSiteProfiles KHA domain profile. 827 907 IPR021789 -
Bpe08g00448 913 ProSiteProfiles Ankyrin repeat region circular profile. 582 613 - -
Bpe08g00448 913 Pfam Cyclic nucleotide-binding domain 425 508 IPR000595 -
Bpe08g00448 913 Pfam Ion transport protein 63 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe08g00448 913 Pfam Ankyrin repeats (3 copies) 653 730 IPR002110 GO:0005515
Bpe08g00448 913 Pfam Ankyrin repeats (3 copies) 554 644 IPR002110 GO:0005515
Bpe08g00448 913 PANTHER K+ TRANSPORTER 1-RELATED 17 321 - -
Bpe08g00448 913 SUPERFAMILY cAMP-binding domain-like 336 524 IPR018490 -
Bpe08g00448 913 PANTHER K+ TRANSPORTER 1-RELATED 336 894 - -
Bpe08g00448 913 SMART ANK_2a 645 675 IPR002110 GO:0005515
Bpe08g00448 913 SMART ANK_2a 549 578 IPR002110 GO:0005515
Bpe08g00448 913 SMART ANK_2a 615 644 IPR002110 GO:0005515
Bpe08g00448 913 SMART ANK_2a 679 708 IPR002110 GO:0005515
Bpe08g00448 913 SMART ANK_2a 582 611 IPR002110 GO:0005515
Bpe08g00448 913 PRINTS EAG/ELK/ERG potassium channel family signature 75 82 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe08g00448 913 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe08g00448 913 PRINTS EAG/ELK/ERG potassium channel family signature 98 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe08g00448 913 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe08g00448 913 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bpe08g00448 913 PRINTS EAG/ELK/ERG potassium channel family signature 109 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00497 Bpe08g00448 CCT
Bpe01g00497 Bpe08g00448 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00588 Bpe-Chr2:3817067 Bpe08g00448 Bpe-Chr8:2841352 5.23E-174 dispersed
Bpe02g00977 Bpe-Chr2:9197560 Bpe08g00448 Bpe-Chr8:2841352 0 dispersed
Bpe03g01274 Bpe-Chr3:31275865 Bpe08g00448 Bpe-Chr8:2841352 1.90E-13 dispersed
Bpe07g00021 Bpe-Chr7:150078 Bpe08g00448 Bpe-Chr8:2841352 9.06E-157 dispersed
Bpe08g00448 Bpe-Chr8:2841352 Bpe12g00649 Bpe-Chr12:12151767 5.21E-109 dispersed
Bpe01g00497 Bpe-Chr1:3177400 Bpe08g00448 Bpe-Chr8:2841352 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00448 K21867 - zju:107432387 1391.71