Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00463 ATGAAGGAGAAGACCCATTTCAACCTTACCTTCACTCTCTCACTTTCCGTTGTTTTTCTTCTTGCTTCTCTGGTGTCCCTCTGTAATGGAGGCTTCGTCATTTCTAGCCATGGCGGTCTCACTGACGCTGAGGCTTTGTATATCAGAAAGCGTCAGCTTCTTTACTACAGAGACGAGTTCGGCGATCGAGGTGAGAATGTAACCGTCGATTCTTCTCTTGTTTTTCAAAACGAACGGCTCAGAAATGCTTATATTGCTTTACAAGCATGGAAGCAAGCTATTTTATCTGACCCTTTCAATCTTACCGAGAATTGGGTGGGGTCCGATGTCTGTCACTATACTGGGGTTTACTGTGCTCCGGCGCCGGATAATCACAAGATCTTAACAGTCGCCGGAATCGATCTAAACCACGGAGACATTGCTGGGTACTTACCGGAAGAGCTCGGTCTACTTGTAGATCTTGCATTGTTCCACATCAACTCTAATCGGTTTTGTGGTACTGTTCCTCACAAGTTTGAACGCCTGAAACTGCTCTACGAGCTGGATCTGAGTAACAATAGGTTCGCCGGGAAGTTTCCAGTGGTGGTTCTTAAGCTTCCATCGCTTAAATTTTTGGATCTGAGGTTTAATGAGTTCGAAGGTACTATACCAAGCGACCTGTTTGATAAAGATTTGGATGCTATATTTATTAATCATAACAGGTTTAGATTTGAGCTACCGGAAAATTTCGGAAATTCTCCAGTCTCTGTTATCGTTCTTGCTAACAATAAATTCCATGGCTGTGTTCCTTCGAGCTTGGGTAATATGTCGAGGCTGAACGAAATTATTATGATGGACAATGGGTTCCGATCGTGTTTACCCCCTGAGATTGGGTTGCTGAAGAATTTGACGGTGTTTGATGTGAGTTTCAATGAGCTGCTTGGTCCGTTGCCGGAAGAAATAGGGGGCATGGTCAGTTTGGAGCAGCTTAATGTGGCTCATAATCTTCTCTCCGGGAAGATTCCGGCCAGTATTTGTAAACTTCCCAATCTGCAGAATTTCACTTTCTCATATAACTTCTTTACCGGTGAGCCGCCGGCGTGCTTGGGGCTTTCAGATTTCGACGACCGAAGAAACTGCTTGCCTGAGCGTCCGCTCCAGAGGTCAGCCAAGCAATGTAAGTCGTTTTTGTCCAAGCCGGTTGACTGTGGCTCGTTTAGATGTAAACCTTTTGTTCCTACTTTACCGCCGCCACCTCCTCCGTCTCCCCCTGTCTTCCCTCCGCCGCCGGTTGCTATTCTCTCTCCCCCACCTTCACCTATTTACTCTCCACTATCGCCCCCACCACCGTCTCCACCTTCATCATCTCCCCCACCACCTCCCGTTTATTCTCCTCCCCCACCACCTTCTCCTCCTCCACCAATTTACTTTTCCCCTCCGCCACCTTCTCCACCGCCTCCAGTTTACTCTCCGCCTCCGCCTTCACCACCTCCACCTATTTACTCTCCACCACCTCCTCCTCCGCCTCCACCACCTCCTCCTCCTCCTCCTCCTCCACCACCGCCACCTACAGTGTACTTTCCACCACCGCCACCTCCAGTGTCCTCTCCACCACCGCCACCTCCGATCTACTCTCCCCCTCCACCTCCTCTCTACTCTCCTCCACCACCGCCACCGCCACCTCTATCACCTCCAATTTATTATTCTCCTCCACCTTCACCTTTGCAGCCTCCTGTCTATTGTCCAATTCCTTCCCAGCCACCACCTGTTTACGAATATAGCTCACCTCCACCACCCCATCACCCGCCCCCACCACCTGCCTACCTGTATCTCTCACCACCACCACCTCATCATGTCTATTCTCCACCTCCCGTCTCGCACTCGCCACCTCCGCTGCCATGTATAGAGCCATCTCCACCGCCCTCACCTTCTCCACCACCTCCAATTCATTACTTGCCGCCTCCATCACCATCTCCCCCGCCTCCACCTCCTCCCCACATAGTTCATCACTCTCCTCCACCTCCGCACTCAGTTCATCACTCTCCTCCACCTCCTCCGATTGGCTGTGAAACTCCGGCTTCTCCACCACCATCACCAATCCCTGTGCATGATTATCCTCCTCCTGCTACCCCGTCATATGAAGGGCCATTACCGCCCATACACGGAGTTTCATACGCATCTCCTCCGCCCCCACCCTTTTATTGA 2184 50.82 MKEKTHFNLTFTLSLSVVFLLASLVSLCNGGFVISSHGGLTDAEALYIRKRQLLYYRDEFGDRGENVTVDSSLVFQNERLRNAYIALQAWKQAILSDPFNLTENWVGSDVCHYTGVYCAPAPDNHKILTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFERLKLLYELDLSNNRFAGKFPVVVLKLPSLKFLDLRFNEFEGTIPSDLFDKDLDAIFINHNRFRFELPENFGNSPVSVIVLANNKFHGCVPSSLGNMSRLNEIIMMDNGFRSCLPPEIGLLKNLTVFDVSFNELLGPLPEEIGGMVSLEQLNVAHNLLSGKIPASICKLPNLQNFTFSYNFFTGEPPACLGLSDFDDRRNCLPERPLQRSAKQCKSFLSKPVDCGSFRCKPFVPTLPPPPPPSPPVFPPPPVAILSPPPSPIYSPLSPPPPSPPSSSPPPPPVYSPPPPPSPPPPIYFSPPPPSPPPPVYSPPPPSPPPPIYSPPPPPPPPPPPPPPPPPPPPPTVYFPPPPPPVSSPPPPPPIYSPPPPPLYSPPPPPPPPLSPPIYYSPPPSPLQPPVYCPIPSQPPPVYEYSSPPPPHHPPPPPAYLYLSPPPPHHVYSPPPVSHSPPPLPCIEPSPPPSPSPPPPIHYLPPPSPSPPPPPPPHIVHHSPPPPHSVHHSPPPPPIGCETPASPPPSPIPVHDYPPPATPSYEGPLPPIHGVSYASPPPPPFY 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2974154 2976337 - Bpe022560.1 Bpe08g00463 107339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00463 727 MobiDBLite consensus disorder prediction 435 460 - -
Bpe08g00463 727 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 16 494 - -
Bpe08g00463 727 MobiDBLite consensus disorder prediction 612 727 - -
Bpe08g00463 727 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 16 494 - -
Bpe08g00463 727 SUPERFAMILY L domain-like 84 363 - -
Bpe08g00463 727 Pfam Leucine rich repeat N-terminal domain 86 118 IPR013210 -
Bpe08g00463 727 PRINTS Proline rich extensin signature 430 442 - -
Bpe08g00463 727 PRINTS Proline rich extensin signature 409 425 - -
Bpe08g00463 727 PRINTS Proline rich extensin signature 442 463 - -
Bpe08g00463 727 MobiDBLite consensus disorder prediction 612 708 - -
Bpe08g00463 727 Gene3D Ribonuclease Inhibitor 246 380 IPR032675 -
Bpe08g00463 727 Gene3D Ribonuclease Inhibitor 83 245 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00521 Bpe08g00463 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00463 Bpe-Chr8:2974154 Bpe08g00595 Bpe-Chr8:4306895 1.55E-09 dispersed
Bpe02g01792 Bpe-Chr2:20183940 Bpe08g00463 Bpe-Chr8:2974154 3.86E-80 transposed
Bpe04g00037 Bpe-Chr4:371105 Bpe08g00463 Bpe-Chr8:2974154 4.68E-171 transposed
Bpe08g00506 Bpe-Chr8:3354068 Bpe08g00463 Bpe-Chr8:2974154 1.05E-96 transposed
Bpe01g00521 Bpe-Chr1:3372460 Bpe08g00463 Bpe-Chr8:2974154 6.81E-09 wgd
Bpe03g00927 Bpe-Chr3:28950384 Bpe08g00463 Bpe-Chr8:2974154 4.29E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00463 - - tcc:18588631 674.855