Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00466 ATGGATAATAGCAGTAATAGAAGCTCCGATTCTATAACATCGCTTATCCCAGAAATTAAGTTTACGAAGCTTTTCATCAATGGCGAATTCGTTGACTCAGTTTCAGGAAAAACATTCGAAACGATCGATCCAAGAACAGAGGAGGTGATAGCGGAGATAGCAGAAGGAGACGAAGAGGACGTTGATTTGGCCGTCAAAGCTGCCCGTGAAGCCTTTGATCATGGCCCTTGGCCGCGCTTACCTGGTTTTGAAAGGGGAAAGCTGATGATGAAATTCGCTAACTTGGTGGACGAACACATTGAAGAGTTAGCTGCTCTAGACGCCATTGATGCCGGGAAGCTATATGCTCTTGGAAAGGCCATGGACATTCCAGAGTCAGCAAATACGCTGCGTTACTACGCCGGCGCCGCCGATAAGATTCATGGGGAGGTACTAAAAATGGGTCGCGACCTCCATGGTTACACTCTACGAGAGCCAGTCGGCGTCGTCGGCCATATAATCCCTTGGAATTTCCCCTCCATCATGTTCTTCGCCAAGGTCAGCCCTGCGTTGGCCGCTGGCTGCACCATGATCGTCAAGCCGGCTGAGCAAAGCTCGCTCTCGGCGCTCTACTATGCACATCTTGCTAAGCTGGCTGGTATTCCCGACGGAGTGCTGAACGTGGTAGCTGGATTTGGAAAAACAGCCGGGGCAGCCCTATGCTCTCACATGGACGTAGATAAAATAAGCTTCACAGGCTCCACAGAAGTTGGGCGACAAATAATGCACGCCTCAGCTAGCAGCAATTTGAAGTCGCTGTGTCTAGAATTAGGAGGCAAATCACCCCTCATGATCTTTGATGATGCTGATTTAGATCAAGCTGCTCAGCTTGCTCTCTTTGGCATTCTCTTCAACAAGGGAGAGATTTGCGTAGCAGGATCGAGAGTTTTTGTTCAAGAAGGAATTTACAATGAACTCGAGAAAAAACTAGTGGAATTGGCGAAGGGATGGGTTGTGGGAGACCCATTTGATCCTAAATCTCAACAAGGACCACAGGTGGATAAGAAACAGTTTGAGAAAATTCTTTCCTACGTCGAGAGTGGAAAGAGAGAAGGAGCCACTTTGCTGACCGGTGGTAAACCCATTGGCAACAAGGGCTATTTCATTGAGCCTACCATTTTTACTGATGTCAAGGAACATATGGCTATATTTCAAGATGAAATATTTGGACCATTCATGTGCCTTGTGAAATTCAAGACGATAGAGGAGGTGATAAAGAGCGCGAACAACACAAAATACGGGCTAGCAGCTGGGGTCGTGACAAAGAACATAGACATAGCAAACACAGTGTCAAGGTCGATAAAAGCCGGGATCGTGTGGGTCAACTGCTACCTTGCTTTCGATCGAGCCTGCCCATATGGAGGCTACAAGATGAGTGGCTTTGGTCGAGATTTTGGGATGGAAGCCCTCAACAACTATCTCCAAATCAAATCTGTTGTCACTCCTTTGTACAACACCCCTTGGCTTTGA 1509 47.45 MDNSSNRSSDSITSLIPEIKFTKLFINGEFVDSVSGKTFETIDPRTEEVIAEIAEGDEEDVDLAVKAAREAFDHGPWPRLPGFERGKLMMKFANLVDEHIEELAALDAIDAGKLYALGKAMDIPESANTLRYYAGAADKIHGEVLKMGRDLHGYTLREPVGVVGHIIPWNFPSIMFFAKVSPALAAGCTMIVKPAEQSSLSALYYAHLAKLAGIPDGVLNVVAGFGKTAGAALCSHMDVDKISFTGSTEVGRQIMHASASSNLKSLCLELGGKSPLMIFDDADLDQAAQLALFGILFNKGEICVAGSRVFVQEGIYNELEKKLVELAKGWVVGDPFDPKSQQGPQVDKKQFEKILSYVESGKREGATLLTGGKPIGNKGYFIEPTIFTDVKEHMAIFQDEIFGPFMCLVKFKTIEEVIKSANNTKYGLAAGVVTKNIDIANTVSRSIKAGIVWVNCYLAFDRACPYGGYKMSGFGRDFGMEALNNYLQIKSVVTPLYNTPWL 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2996513 3003630 - Bpe022563.1 Bpe08g00466 107342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00466 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491
Bpe08g00466 502 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 5 502 - -
Bpe08g00466 502 Pfam Aldehyde dehydrogenase family 30 492 IPR015590 GO:0016491
Bpe08g00466 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 502 - -
Bpe08g00466 502 SUPERFAMILY ALDH-like 16 498 IPR016161 GO:0016491
Bpe08g00466 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620
Bpe08g00466 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Bpe08g00466 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02054 Bpe-Chr2:22097766 Bpe08g00466 Bpe-Chr8:2996513 0 dispersed
Bpe07g00817 Bpe-Chr7:14464866 Bpe08g00466 Bpe-Chr8:2996513 1.40E-131 dispersed
Bpe08g00466 Bpe-Chr8:2996513 Bpe13g01081 Bpe-Chr13:16366936 0 dispersed
Bpe01g00522 Bpe-Chr1:3381284 Bpe08g00466 Bpe-Chr8:2996513 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00466 K12355 - fve:101301128 795.038