Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00494 ATGAAAAGACATGATCCCATAATATTACTGTTTATAGGGCAACTCACTCACGCGTGCACAGAAGCGACTCTCTCTCTCTCTCTCAATAACTCATCGAAGGACGCTGCAGGAGAAAAGGTTCACCATCTCAGCAAGTTATCAGCCATGTCAGACCAACCAAACTCGGAGACTGAGTCTGGCTTCACCAACTTGTCTTCCTCACCGTCCTCTTCGCCCGGAGAATCGATTGCTGAATCTCCACAGAAACGATCAGCTCAAAATATCAATCCTCACCATCCCGTTTTTCGGGGAGTCCGAAAGCGAGCTTGGGGCAAATGGGTGTCTGAAATCCGACAACCTAGAAAGAAAAATCGGATCTGGCTCGGAACTTTCTCCACACCGGAAATGGCCGCTCGAGCCCACGACGTCGCCGCTTTAAGCATAAAAGGAAACTCCGCCATTCTCAACTTCCCAGAACTAGCCGAAGCTCTTCCCCGCCCGGCTTCCAACTCCCCTCGAGATGTGCAAGTCGCCGCTGCGAAAGCCGCTTCAATGGAGTTTCCCTTTCCTTCACTGACGTCGCCATCGCCTATCACTCAGTCTTCTTCCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCATCTTCCCTATCGTCTTTAGAGGAATCGACGCCGGAGGAGCTCAGTGAGATTGTACGCTTGCCGAGCTTAGGAACGAGTTACTGCTCCCTTGACTCCGGTAACGAGCTGGTATTCGTTGACTCCGCGGAAGCCTTTCTTTATCCTTACCCATGGTATCAAAGCATAAATGAAGACGAAGCTTTCTGTTTGTCAATGGCGGAAACAGAGTCAGTGATTCCCTCGTGCCTGCATTAA 858 50.0 MKRHDPIILLFIGQLTHACTEATLSLSLNNSSKDAAGEKVHHLSKLSAMSDQPNSETESGFTNLSSSPSSSPGESIAESPQKRSAQNINPHHPVFRGVRKRAWGKWVSEIRQPRKKNRIWLGTFSTPEMAARAHDVAALSIKGNSAILNFPELAEALPRPASNSPRDVQVAAAKAASMEFPFPSLTSPSPITQSSSASSSSSSSSSSSSSLSSLEESTPEELSEIVRLPSLGTSYCSLDSGNELVFVDSAEAFLYPYPWYQSINEDEAFCLSMAETESVIPSCLH 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3241344 3242201 + Bpe022592.1 Bpe08g00494 107370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00494 285 MobiDBLite consensus disorder prediction 187 218 - -
Bpe08g00494 285 MobiDBLite consensus disorder prediction 39 94 - -
Bpe08g00494 285 MobiDBLite consensus disorder prediction 47 88 - -
Bpe08g00494 285 Pfam AP2 domain 93 143 IPR001471 GO:0003700|GO:0006355
Bpe08g00494 285 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 52 268 - -
Bpe08g00494 285 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 52 268 - -
Bpe08g00494 285 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Bpe08g00494 285 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Bpe08g00494 285 Gene3D AP2/ERF domain 94 152 IPR036955 GO:0003700|GO:0006355
Bpe08g00494 285 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Bpe08g00494 285 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Bpe08g00494 285 CDD AP2 95 153 IPR001471 GO:0003700|GO:0006355
Bpe08g00494 285 SUPERFAMILY DNA-binding domain 94 152 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00170 Bpe-Chr2:1171933 Bpe08g00494 Bpe-Chr8:3241344 1.42E-60 dispersed
Bpe02g00270 Bpe-Chr2:1826101 Bpe08g00494 Bpe-Chr8:3241344 8.12E-37 dispersed
Bpe02g01182 Bpe-Chr2:15488200 Bpe08g00494 Bpe-Chr8:3241344 3.12E-62 dispersed
Bpe04g00398 Bpe-Chr4:2498008 Bpe08g00494 Bpe-Chr8:3241344 2.04E-60 dispersed
Bpe04g01036 Bpe-Chr4:7491466 Bpe08g00494 Bpe-Chr8:3241344 2.54E-33 dispersed
Bpe05g00566 Bpe-Chr5:19796795 Bpe08g00494 Bpe-Chr8:3241344 4.31E-42 dispersed
Bpe05g01071 Bpe-Chr5:23220795 Bpe08g00494 Bpe-Chr8:3241344 2.15E-42 dispersed
Bpe08g00494 Bpe-Chr8:3241344 Bpe14g00516 Bpe-Chr14:4538438 7.14E-55 dispersed
Bpe05g01037 Bpe-Chr5:22946413 Bpe08g00494 Bpe-Chr8:3241344 1.18E-37 transposed
Bpe01g00552 Bpe-Chr1:3582125 Bpe08g00494 Bpe-Chr8:3241344 2.25E-101 wgd
Bpe13g01287 Bpe-Chr13:18029116 Bpe08g00494 Bpe-Chr8:3241344 1.85E-62 wgd
Bpe02g02241 Bpe-Chr2:23387605 Bpe08g00494 Bpe-Chr8:3241344 1.55E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21746 PF00847 AP2 1.40E-13 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00494 K09286 - tcc:18588535 228.409