Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00524 ATGTTTGACTTCACTACGGCCTTGTTGACTTCTCAGCGGTTTTGGCTTAAACAAGTTGCCATAAATGCTTCCTTCTTTGGTGATTATGAAGTATTGTATGTTCAATATCCAGGTTTACCTCCGTCTCCTCCTGGAGTGCCGAATATAAATAGTCCGCCTTATTCGGGAAACAATAGTAATAACAATAACAACAATGGAAGGACGATAAAGCCGATTGGAGTTGATGTACATAGTAGACGACATAATGATCGGCTTACCGGTGGCATGATTGCCATCATAACTCTCTCGACCCTTTTAGCCGTGGTTTTTTGCATAGCTGTTGCTTGGATTTTGGTGTTCGAACAAAGAGATTGTTTTAGGCTGCAAAAGGCGGACCCAGAGGCTTTATTATCTTCCCTTTCTAAGCCTTCAGTAAAAACAATTTCAGGAATGGTGGGCTCGACAATGGGGAGTATGCGCAGTTCGGTTTCTTTATCACTTGAGTCTAGTATGGCGACATATATGGGATCTGCTAAGACATTTAGTGCGAATGACATGGAGAGGGCCACAAACCATTTTGATCCTACGAGAATACTTGGGGAAGGTGGCTTTGGACTTGTTTACAGTGGCCTTCTTGAAGACGGAATGAAAGTGGCAGTAAAAGTTTTAAAGAGGGATGATCACCATGGTGGTCGGGAATTTTGTGCCGAAGTCGAAATGCTTAGCCGCCTCCATCATCGGAATTTGGTAAAGTTAATCGGCATATGCACAGAGGATCATATCCGCTGCCTTGTCTATGAACTCATTCCAAACGGCAGCGTTGAATCTCATTTACATGGAGTTGACAAGGAAAAAGCTCCCCTTGATTGGATCACTCGCATGAAGATAGCACTTGGAGCTGCAAGGGGTCTGGCTTATCTCCACGAGGATTCAAGCCCTCGAGTCATACATCGAGACTTCAAAGCCAGCAACATTTTGCTAGAATGCGATTTCACTCCGAAAGTATCCGACTTCGGTTTGGCTCGAACGGCTATGGACGAGGAAAGCAGACACATATCGACACGAGTCATGGGGACTTTTGGGTACGTAGCTCCCGAGTATGCTATGACCGGTCATCTTCTCGTGAAGAGTGATGTTTATAGTTACGGAGTTGTCCTCCTCGAACTTCTTACCGGAAGAAAACCTGTAGACATGTCACAGCCACCAGGCCAAGAAAACCTGGTCGCGTGGGCCCATTCACTCCTTGCGAGTAGAGAAGGATTGGAATTGATAATCGATAAATCTTTGGGTTCTAATGCTCCTTTTGACAGCATTGCCAAAGTGGCTGCCATTGCTTCAATGTGTGTGCAGCCAGAAGTATCGAATCGTCCTTTCATGGGGGAGGTTGTTCAAGCTCTTAAACTAGTATGCAACGAGTGTGATGAAAAAAGAAAATCAGGATCGAGGAGTTCGAGCCGGGAAGCTATCTCGATTGACATTCATGCCAACCTGGATAGCAGGGGCTTGAGACAATTTCCTCATTCTTTGTATGGTCAATACTCACCACCCAACTTTGACAATGGGATGGATTCTGAAACAAGGCTGTCGATTTCGGAATTGTTGAGCTCATCTGCGAGATTTCAAATGCAGGAGTCTAGATCGTTTCAAAGGCAGTCAAGCTCGGGTCCTTTGAGTGCAAGAAGAGGCAGGCCGATTTGGCAAAGGATGAGATTTTCTGGAGAAAATGTGAGCGAAAGTGGATTCAATACCAGATTTTGGCCAGGATCGAACTGA 1752 45.15 MFDFTTALLTSQRFWLKQVAINASFFGDYEVLYVQYPGLPPSPPGVPNINSPPYSGNNSNNNNNNGRTIKPIGVDVHSRRHNDRLTGGMIAIITLSTLLAVVFCIAVAWILVFEQRDCFRLQKADPEALLSSLSKPSVKTISGMVGSTMGSMRSSVSLSLESSMATYMGSAKTFSANDMERATNHFDPTRILGEGGFGLVYSGLLEDGMKVAVKVLKRDDHHGGREFCAEVEMLSRLHHRNLVKLIGICTEDHIRCLVYELIPNGSVESHLHGVDKEKAPLDWITRMKIALGAARGLAYLHEDSSPRVIHRDFKASNILLECDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWAHSLLASREGLELIIDKSLGSNAPFDSIAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEKRKSGSRSSSREAISIDIHANLDSRGLRQFPHSLYGQYSPPNFDNGMDSETRLSISELLSSSARFQMQESRSFQRQSSSGPLSARRGRPIWQRMRFSGENVSESGFNTRFWPGSN 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3511012 3513218 - Bpe022622.1 Bpe08g00524 107400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00524 583 MobiDBLite consensus disorder prediction 537 557 - -
Bpe08g00524 583 MobiDBLite consensus disorder prediction 45 69 - -
Bpe08g00524 583 Gene3D Transferase(Phosphotransferase) domain 1 262 486 - -
Bpe08g00524 583 Pfam Protein tyrosine and serine/threonine kinase 190 459 IPR001245 GO:0004672|GO:0006468
Bpe08g00524 583 MobiDBLite consensus disorder prediction 51 69 - -
Bpe08g00524 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Bpe08g00524 583 Gene3D Phosphorylase Kinase; domain 1 156 261 - -
Bpe08g00524 583 ProSiteProfiles Protein kinase domain profile. 186 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00524 583 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Bpe08g00524 583 PANTHER OS01G0750732 PROTEIN 2 582 - -
Bpe08g00524 583 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 582 - -
Bpe08g00524 583 CDD STKc_IRAK 192 460 - -
Bpe08g00524 583 MobiDBLite consensus disorder prediction 537 551 - -
Bpe08g00524 583 SUPERFAMILY Protein kinase-like (PK-like) 165 459 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00524 Bpe-Chr8:3511012 Bpe09g00415 Bpe-Chr9:7056448 0 dispersed
Bpe06g00777 Bpe-Chr6:18032245 Bpe08g00524 Bpe-Chr8:3511012 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63455 PF07714 PK_Tyr_Ser-Thr 3.60E-49 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00524 - - tcc:18588393 731.095