Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00532 ATGAAGAATCATCAGGAACACGACGGTGACGAGGAAGAGGAGGAGAGGACCATGGCTGGAGAAGGGGAGGAAGAGGTCGGAGATGTTGGAGAGGTGGGTTCGAGCTTGACAATGGAGAGGGTAGCAGCAGCAAAGCAATTTATCGAGAATCACTATAAAGCTCAGAAAAAACACATTCAAGAACGAAAAGAAAGGCGCTCTGTGTTGGAAAGGAAGTTAGCATCTTCTGATGCATCACAAGAGGAGCAAATTAATCTTTTGAAAGATTTGGAGCGTAAAGAAACTGACTATATGCGACTCAAAAGGCATAAAATCTGTGTCGATGACTTTGATCTACTAACAATTATTGGACGAGGAGCCTTTGGAGAAGTAAGACTCTGCAGGGACAAGAAATCAGGCAACATTTACGCCATGAAAAAGTTGAAGAAATCGGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCTGAAGTTGCCAGCCACTGCATTGTTAAACTCTATTATTCCTTTCAAGATGCTGAATATTTATATCTAATTATGGAGTATCTACCTGGTGGTGATATGATGACGTTGCTGATCAGAGAGGAAACTTTGACCGAAACTGTCGCTAAATTTTACATCGCTCAAAGTGTTCTTGCAATCGAGTCTATTCACAAGCATAATTACATTCATAGGTTTGTCGATTATATATGTGACAATGTTACCAGTTTTGTAATTCTGACTTGCTTTACAAACTTTCTTGATTTGTGTTTTTTCAGAGACATAAAACCCGACAATCTTCTTCTAGACGAAAATGGTCATATGAAACTCTCTGATTTTGGTCTCTGCAAACCTCTTGACTGCTCAAATTTATCCTCGATAAATGAAAATGAAGTTCTAGATGATAAGAACTTGAATGAAACTATGGACGTCGATGAATCCTCTCCGGCTACTGTTAGTGGAAGACGATGGAAGAGTCCTCTCGAACAACTTCAGCACTGGCAGATCAACAGGAGGAAACTGGCATTTTCCACTGTTGGCACTCCCGATTATATAGCTCCGGAAGTATTGCTGAAGAAAGGATATGGCATGGAGTGTGACTGGTGGTCGCTTGGTGCAATACTGTATGAGATGCTTGTTGGTTATCCTCCATTTTATGCCGATGATCCAGTAACAACCTGCAGGAAGATTGTGCATTGGAGGAATCACTTGAAATTTCCTAATGAAACACGGGTTTCACCCGAAGTGAAGGATCTAATATCGAGGCTTCTCTGTGATGTTGAGCACAGACTTGGTACGGGAGGGGCTGATCGAATCAAAGCTCACCCTTGGTTCAAAGATGTTGCGTGGGACAAACTCTATGAAATGGAGGCAGCTTTTAAACCCGAGGTCAACGGGGAGCTTGACACTCAAAATTTTATGAAGTTCGACGAGGTGGAACAAGCAACCACTAGAGCTGGATCGGGACCAATGAGGAAGATGCTGTTGACTCCAAAGGATCTAAGTTTTGTTGGCTACACATACAAGAATTTTGAGGCAGTCAAAGGTGTT 1551 42.1 MKNHQEHDGDEEEEERTMAGEGEEEVGDVGEVGSSLTMERVAAAKQFIENHYKAQKKHIQERKERRSVLERKLASSDASQEEQINLLKDLERKETDYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCRDKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVAKFYIAQSVLAIESIHKHNYIHRFVDYICDNVTSFVILTCFTNFLDLCFFRDIKPDNLLLDENGHMKLSDFGLCKPLDCSNLSSINENEVLDDKNLNETMDVDESSPATVSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFYADDPVTTCRKIVHWRNHLKFPNETRVSPEVKDLISRLLCDVEHRLGTGGADRIKAHPWFKDVAWDKLYEMEAAFKPEVNGELDTQNFMKFDEVEQATTRAGSGPMRKMLLTPKDLSFVGYTYKNFEAVKGV 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3615119 3619108 + Bpe026135 Bpe08g00532 107408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00532 517 SMART pkinase_C_6 446 510 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe08g00532 517 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Bpe08g00532 517 Pfam Protein kinase domain 112 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00532 517 Pfam Protein kinase domain 257 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00532 517 Pfam Protein kinase domain 338 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00532 517 MobiDBLite consensus disorder prediction 1 35 - -
Bpe08g00532 517 Gene3D Transferase(Phosphotransferase) domain 1 259 289 - -
Bpe08g00532 517 SMART serkin_6 110 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00532 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 234 - -
Bpe08g00532 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 258 516 - -
Bpe08g00532 517 CDD STKc_NDR_like 108 509 - -
Bpe08g00532 517 Gene3D Phosphorylase Kinase; domain 1 464 474 - -
Bpe08g00532 517 Gene3D Transferase(Phosphotransferase) domain 1 344 463 - -
Bpe08g00532 517 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 258 516 - -
Bpe08g00532 517 Gene3D Phosphorylase Kinase; domain 1 47 238 - -
Bpe08g00532 517 MobiDBLite consensus disorder prediction 12 28 - -
Bpe08g00532 517 ProSiteProfiles AGC-kinase C-terminal domain profile. 446 517 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe08g00532 517 SUPERFAMILY Protein kinase-like (PK-like) 98 457 IPR011009 -
Bpe08g00532 517 ProSiteProfiles Protein kinase domain profile. 110 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00532 517 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 28 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00048 Bpe-Chr5:873065 Bpe08g00532 Bpe-Chr8:3615119 1.06E-95 dispersed
Bpe06g00550 Bpe-Chr6:16532541 Bpe08g00532 Bpe-Chr8:3615119 0 dispersed
Bpe08g00532 Bpe-Chr8:3615119 Bpe12g00392 Bpe-Chr12:9344961 1.21E-61 dispersed
Bpe08g00532 Bpe-Chr8:3615119 Bpe10g00480 Bpe-Chr10:12055396 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63456 PF00069 Pkinase 1.10E-27 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00532 K08790 - cit:102622557 828.165