Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00532 | ATGAAGAATCATCAGGAACACGACGGTGACGAGGAAGAGGAGGAGAGGACCATGGCTGGAGAAGGGGAGGAAGAGGTCGGAGATGTTGGAGAGGTGGGTTCGAGCTTGACAATGGAGAGGGTAGCAGCAGCAAAGCAATTTATCGAGAATCACTATAAAGCTCAGAAAAAACACATTCAAGAACGAAAAGAAAGGCGCTCTGTGTTGGAAAGGAAGTTAGCATCTTCTGATGCATCACAAGAGGAGCAAATTAATCTTTTGAAAGATTTGGAGCGTAAAGAAACTGACTATATGCGACTCAAAAGGCATAAAATCTGTGTCGATGACTTTGATCTACTAACAATTATTGGACGAGGAGCCTTTGGAGAAGTAAGACTCTGCAGGGACAAGAAATCAGGCAACATTTACGCCATGAAAAAGTTGAAGAAATCGGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCTGAAGTTGCCAGCCACTGCATTGTTAAACTCTATTATTCCTTTCAAGATGCTGAATATTTATATCTAATTATGGAGTATCTACCTGGTGGTGATATGATGACGTTGCTGATCAGAGAGGAAACTTTGACCGAAACTGTCGCTAAATTTTACATCGCTCAAAGTGTTCTTGCAATCGAGTCTATTCACAAGCATAATTACATTCATAGGTTTGTCGATTATATATGTGACAATGTTACCAGTTTTGTAATTCTGACTTGCTTTACAAACTTTCTTGATTTGTGTTTTTTCAGAGACATAAAACCCGACAATCTTCTTCTAGACGAAAATGGTCATATGAAACTCTCTGATTTTGGTCTCTGCAAACCTCTTGACTGCTCAAATTTATCCTCGATAAATGAAAATGAAGTTCTAGATGATAAGAACTTGAATGAAACTATGGACGTCGATGAATCCTCTCCGGCTACTGTTAGTGGAAGACGATGGAAGAGTCCTCTCGAACAACTTCAGCACTGGCAGATCAACAGGAGGAAACTGGCATTTTCCACTGTTGGCACTCCCGATTATATAGCTCCGGAAGTATTGCTGAAGAAAGGATATGGCATGGAGTGTGACTGGTGGTCGCTTGGTGCAATACTGTATGAGATGCTTGTTGGTTATCCTCCATTTTATGCCGATGATCCAGTAACAACCTGCAGGAAGATTGTGCATTGGAGGAATCACTTGAAATTTCCTAATGAAACACGGGTTTCACCCGAAGTGAAGGATCTAATATCGAGGCTTCTCTGTGATGTTGAGCACAGACTTGGTACGGGAGGGGCTGATCGAATCAAAGCTCACCCTTGGTTCAAAGATGTTGCGTGGGACAAACTCTATGAAATGGAGGCAGCTTTTAAACCCGAGGTCAACGGGGAGCTTGACACTCAAAATTTTATGAAGTTCGACGAGGTGGAACAAGCAACCACTAGAGCTGGATCGGGACCAATGAGGAAGATGCTGTTGACTCCAAAGGATCTAAGTTTTGTTGGCTACACATACAAGAATTTTGAGGCAGTCAAAGGTGTT | 1551 | 42.1 | MKNHQEHDGDEEEEERTMAGEGEEEVGDVGEVGSSLTMERVAAAKQFIENHYKAQKKHIQERKERRSVLERKLASSDASQEEQINLLKDLERKETDYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCRDKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVAKFYIAQSVLAIESIHKHNYIHRFVDYICDNVTSFVILTCFTNFLDLCFFRDIKPDNLLLDENGHMKLSDFGLCKPLDCSNLSSINENEVLDDKNLNETMDVDESSPATVSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFYADDPVTTCRKIVHWRNHLKFPNETRVSPEVKDLISRLLCDVEHRLGTGGADRIKAHPWFKDVAWDKLYEMEAAFKPEVNGELDTQNFMKFDEVEQATTRAGSGPMRKMLLTPKDLSFVGYTYKNFEAVKGV | 517 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3615119 | 3619108 | + | Bpe026135 | Bpe08g00532 | 107408 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00532 | 517 | SMART | pkinase_C_6 | 446 | 510 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bpe08g00532 | 517 | ProSitePatterns | Protein kinases ATP-binding region signature. | 116 | 139 | IPR017441 | GO:0005524 | |
Bpe08g00532 | 517 | Pfam | Protein kinase domain | 112 | 232 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00532 | 517 | Pfam | Protein kinase domain | 257 | 289 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00532 | 517 | Pfam | Protein kinase domain | 338 | 445 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00532 | 517 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Bpe08g00532 | 517 | Gene3D | Transferase(Phosphotransferase) domain 1 | 259 | 289 | - | - | |
Bpe08g00532 | 517 | SMART | serkin_6 | 110 | 445 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00532 | 517 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 28 | 234 | - | - | |
Bpe08g00532 | 517 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 258 | 516 | - | - | |
Bpe08g00532 | 517 | CDD | STKc_NDR_like | 108 | 509 | - | - | |
Bpe08g00532 | 517 | Gene3D | Phosphorylase Kinase; domain 1 | 464 | 474 | - | - | |
Bpe08g00532 | 517 | Gene3D | Transferase(Phosphotransferase) domain 1 | 344 | 463 | - | - | |
Bpe08g00532 | 517 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 258 | 516 | - | - | |
Bpe08g00532 | 517 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 238 | - | - | |
Bpe08g00532 | 517 | MobiDBLite | consensus disorder prediction | 12 | 28 | - | - | |
Bpe08g00532 | 517 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 446 | 517 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Bpe08g00532 | 517 | SUPERFAMILY | Protein kinase-like (PK-like) | 98 | 457 | IPR011009 | - | |
Bpe08g00532 | 517 | ProSiteProfiles | Protein kinase domain profile. | 110 | 445 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00532 | 517 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 28 | 234 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00048 | Bpe-Chr5:873065 | Bpe08g00532 | Bpe-Chr8:3615119 | 1.06E-95 | dispersed | |
Bpe06g00550 | Bpe-Chr6:16532541 | Bpe08g00532 | Bpe-Chr8:3615119 | 0 | dispersed | |
Bpe08g00532 | Bpe-Chr8:3615119 | Bpe12g00392 | Bpe-Chr12:9344961 | 1.21E-61 | dispersed | |
Bpe08g00532 | Bpe-Chr8:3615119 | Bpe10g00480 | Bpe-Chr10:12055396 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63456 | PF00069 | Pkinase | 1.10E-27 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00532 | K08790 | - | cit:102622557 | 828.165 |