Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00550 AGAATGGGAGCTGATAAAGTATCATGGCGATCTGTTCTTCCATGCTGCAAGCCGGAGTGCAGGTCCGACACCTACACTAAAGTTATGGCGAAGCAGAGTTCGTTTCAGAGGCTTTCGCTGTTGGATTTGAGCAATCCAAGCTCCACGCTTTCCGAGGATTTGTCGGTGTCTCTTGCCGGATCCGATCTTCATATTTTCACCCTGGCTGAACTGAAGGTGATAACCCAGAATTTCTCGGCGTCTAATTTTCTTGGGGAAGGTGGGTTTGGACCTGTGCATAAGGGGTTCATTGACGACAAGCTTAGACCAGGGCTGAAGGCTCAGCCCGTGGCGGTCAAGCTCTTGGATTTGGATGGCTCACAAGGACATCGGGAGTGGTTGACGGAAGTGATCTTTCTGGGGCAGTTGATTCATCCTCACCTTGTGAAGCTCATAGGGTATTGCTGCGAAGATGAACACAGGCTACTGGTTTATGAATACATGCCGAGAGGAAGCTTAGAGAATCAACTCTTCAGACGCTATTCGATGTCACTGCCATGGTCGTCGAGAATGAAAATCGCTCTTGGCGCTGCAAAAGGTCTCGCCTTCCTGCACGAGGCCAATAAACCTGTCATTTATCGGGACTTCAAGGCTTCAAATATATTGCTAGACTCCGATTTCACTTCAAAACTCTCAGATTTTGGTTTGGCGAAAGATGGGCCAGAAGGAGATGATACCCACGTCTCAACCAGAGTGATGGGGACGCACGGCTATGCTGCTCCTGAATATATCATGACTGGCCATTTGACGGCAATGAGTGATGTGTACAGTTTCGGCGTGGTGCTGCTGGAGCTGCTAACGGGGAGGAGGTCAGTGGACAAGAGTCGCCCTCCGAGGGAGCACAACTTGGTAGACTGGGCGAGGCCTATGCTCAATGACCCTCGAAAGCTTTGCAGAGTGATGGACCCGAGGCTAGAAGGGCAGTACTCAGAAATGGGGGCTCGAAAGGCGGCGGCATTGGCTTATCAATGCCTGAGCCACCGCCCCAAACACAGGCCCGCCATGAGCACGGTCGTTAAGACTTTGGAACCGCTCAAGGATTTTGACGACGTCCTCGTCGGACCCTTTGTCTACACCGTCGCAGCCGAGAGCCATGACTTGCCCAGTAAGGAAGATGGAAGGAAAAGCCATGCACAAAGGGAGGGAAGCAAAGAAAATGGGCAGCACCGCCACTATAATCATCAACGCAGACGTCAGAAATCACCGAACGCCGAGTCGGAGAAAGCTCCGGGTCAAAAAATAACAGAAAGTAAATAG 1296 51.23 RMGADKVSWRSVLPCCKPECRSDTYTKVMAKQSSFQRLSLLDLSNPSSTLSEDLSVSLAGSDLHIFTLAELKVITQNFSASNFLGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLDGSQGHREWLTEVIFLGQLIHPHLVKLIGYCCEDEHRLLVYEYMPRGSLENQLFRRYSMSLPWSSRMKIALGAAKGLAFLHEANKPVIYRDFKASNILLDSDFTSKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKSRPPREHNLVDWARPMLNDPRKLCRVMDPRLEGQYSEMGARKAAALAYQCLSHRPKHRPAMSTVVKTLEPLKDFDDVLVGPFVYTVAAESHDLPSKEDGRKSHAQREGSKENGQHRHYNHQRRRQKSPNAESEKAPGQKITESK 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3824826 3826474 + Bpe022650.1 Bpe08g00550 107426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00550 431 MobiDBLite consensus disorder prediction 378 402 - -
Bpe08g00550 431 ProSiteProfiles Protein kinase domain profile. 78 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00550 431 Gene3D Transferase(Phosphotransferase) domain 1 161 365 - -
Bpe08g00550 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Bpe08g00550 431 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 24 398 - -
Bpe08g00550 431 Gene3D Phosphorylase Kinase; domain 1 42 160 - -
Bpe08g00550 431 PANTHER OS01G0588500 PROTEIN-RELATED 24 398 - -
Bpe08g00550 431 CDD STKc_IRAK 84 358 - -
Bpe08g00550 431 SUPERFAMILY Protein kinase-like (PK-like) 54 356 IPR011009 -
Bpe08g00550 431 Pfam Protein tyrosine and serine/threonine kinase 81 355 IPR001245 GO:0004672|GO:0006468
Bpe08g00550 431 MobiDBLite consensus disorder prediction 377 431 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00618 Bpe08g00550 CCT
Bpe01g00618 Bpe08g00550 ECH
Bpe08g00550 Bpe13g01228 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00550 Bpe-Chr8:3824826 Bpe13g01432 Bpe-Chr13:19594519 1.13E-143 dispersed
Bpe03g00970 Bpe-Chr3:29240697 Bpe08g00550 Bpe-Chr8:3824826 1.25E-159 transposed
Bpe08g01181 Bpe-Chr8:13553938 Bpe08g00550 Bpe-Chr8:3824826 5.90E-142 transposed
Bpe01g00618 Bpe-Chr1:4079956 Bpe08g00550 Bpe-Chr8:3824826 0 wgd
Bpe13g01228 Bpe-Chr13:17567005 Bpe08g00550 Bpe-Chr8:3824826 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63457 PF07714 PK_Tyr_Ser-Thr 1.00E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00550 - - jre:109008510 671.774