Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00570 TATGTAACGGTGGATCTGGGAAATGTACGAGTTGGGAGAAGTAGATTAGTAGAACACAAAGAACGTAATCCAAAATGGTTTGAATCTATGAATATTTACTGCGCCCACAAGGCTTCCACAGTTATGTTCTCTATAAAGGAAAGCTTACCCATTGGGAGTAAAGTAATTGGGAGTGCATCCATGGCGGTAGATAAGCTTCTAACTGGAGAAAATATTGAGAAATGGCTCCCAATTGTCGGCAGTAAACACAAGTCCCGCCATGGAAGATCTAAACTCCTCGTGAATATGCAGTTCTTTCATGTCAGCAAAGATGAAAGCTGGTCAAGAGGAATATCCGGTCTCGATTTTGAAGGAGTCCCGTTTACTTTCTTCAGACAGAGAAAAGGCTGCAAACTTACACTTTATCAAGACGCTCACGTCCCAAATGAGTTCACCCCCAGAATTTCTCTCGATGGAAACAAGACTTATGAGCCTAATAGGTGTTGGGAAGATGTCTTTGATGCTATTTCTAATGCTAAGCACTTTATTTATATTGTTGGATGGTCCGTCTACACTAAGATTGCGTTAATTCGCGACGTTAGTCGGGGAAAACCTGGCCTGGATGTGACGCTCGGAGAGCTTCTGGTGAAGAAGGCCAATGAAGGAGTTAGGGTTCTAATGCTTGTGTGGGATGACAAAACTTCAGTGAAGTTGCTCAAGGAAGATGGAGTAATGGCTACCCATGATGAAGATACAGCAAAATACTTTCACAATTCAGGTGTTCATTGTGTTTTATGCCCTAGAAATCCAGATAATGGGAGGAGCTTAGTTCAAGGAGCGCAGATTTCCACCATGTTTACTCATCATCAGAAGGCGATAGTTGTGGACAAAGCGAGTTCGGTTTCGCATGAAATATCGTCGGATAAACGAAGAATAGTGAGCTTTATTGGAGGAATTGATCTTTGTGATGGGAGATATGATACTCCATGTCACTCTATTTTCAGAACTCTTGGTTCGACCCATCAAACTGATTATCATCAACCTTGTTTTTCGGCCGCGACGATCAAGAAAGGCGGTCCGAGAGAGCCATGGCATGACGTCCATTGCCGCTTGGAAGGGCCAATTGCGTGGGATGTTCTGATCAATTTCGAGCAGAGATGGAAGAAACAGTCTGAAGGAAAGAAAGATTTGCTTGTTAAGGTTGAAGAGCTTGCCGACATTTTCACACCTCCTTCGCCGGTTTCTTCGGTGAAAGATCCAGAAACTTGGAATGTTCAGCTTTTCCGGTCCATTGACGCCGGCTCTGTGATGGGGTTCCCATCGGATCCACAGGAGGCTGCAAAAGCTGGTCTTATAAACTCTGAGAATTCCACAGTTGAAAGAAGCATTCAAGATGCATATATCCACGCCATTAGAAGAGCAAAACGCTTCATTTACATCGAAAATCAGTATTTCCTAGGAAGCTCACATAGCTGGACGAATCAAAACGGCAATGTCGGCGCCCTGAACCTAATTCCCAAAGAACTTTCAATGAAGATCGTGAGCAAGATCTTAGCCGGAGAGAGATTCGCGGTATACGTAGTTATTCCGATGTGGCCGGAGGGTGTACCGGAAAGTGGATCAGTTCAGGCAATACTGAACTGGCAAAGGAAGACGATGGAAATGATGTATAGAGATGTAGCTGAAGCCATTAAAGCAAAGAATATCGAAGCAGACCCTAGAGATTACTTGACATTCTTCTGCCTCGGAAACAAAGAGAAGAAGATGGAGAGAGAATATGAAGCTCCAGAAAAACCACAACACAATACAGATTACAATAGAGCTCAAAAAGCTAGACGTTTTATGATCTACGTCCATGCCAAGACCATGATAGGTATGATCAAATTTCATGAATTTCAAGTTCTAAATATTCTGGATCTTAAAAAGTTTATTAAATTTGCAGTTGACGATGAATACATAATAATTGGATCAGCCAACATCAACCAGAGGTCAATGGATGGAGGTCGAGACACCGAGATAGCCATGGGCGCTTACCAACCTCACCATCTATCCACCAACCAGCTAGCCAGAGGTCAAATTCATGGCTTCAGAATGGCCCTATGGCTCGAGCATCTAAGCCGGGTTGATGACTGCTTTCTAGAACCAGACAGCTTAGAATGCATTCGAAAAGTGAACCACATCGGCGACACTTACTGGCAACTCTACTTCTCCGAGGAGACTGAAGATTTGCCGGGACATTTACTCAGTTATCCGATCGGAGTTACTAACACCGGAGAAGTTACATGTTTAGCTGGTGTGGAGTTCTTTCCTGATACTAAAGCTAGGGTTTGTGGGTCTAAATCTGATTTTCTTCCTCCAATCCTAACTACTTGA 2352 43.41 YVTVDLGNVRVGRSRLVEHKERNPKWFESMNIYCAHKASTVMFSIKESLPIGSKVIGSASMAVDKLLTGENIEKWLPIVGSKHKSRHGRSKLLVNMQFFHVSKDESWSRGISGLDFEGVPFTFFRQRKGCKLTLYQDAHVPNEFTPRISLDGNKTYEPNRCWEDVFDAISNAKHFIYIVGWSVYTKIALIRDVSRGKPGLDVTLGELLVKKANEGVRVLMLVWDDKTSVKLLKEDGVMATHDEDTAKYFHNSGVHCVLCPRNPDNGRSLVQGAQISTMFTHHQKAIVVDKASSVSHEISSDKRRIVSFIGGIDLCDGRYDTPCHSIFRTLGSTHQTDYHQPCFSAATIKKGGPREPWHDVHCRLEGPIAWDVLINFEQRWKKQSEGKKDLLVKVEELADIFTPPSPVSSVKDPETWNVQLFRSIDAGSVMGFPSDPQEAAKAGLINSENSTVERSIQDAYIHAIRRAKRFIYIENQYFLGSSHSWTNQNGNVGALNLIPKELSMKIVSKILAGERFAVYVVIPMWPEGVPESGSVQAILNWQRKTMEMMYRDVAEAIKAKNIEADPRDYLTFFCLGNKEKKMEREYEAPEKPQHNTDYNRAQKARRFMIYVHAKTMIGMIKFHEFQVLNILDLKKFIKFAVDDEYIIIGSANINQRSMDGGRDTEIAMGAYQPHHLSTNQLARGQIHGFRMALWLEHLSRVDDCFLEPDSLECIRKVNHIGDTYWQLYFSEETEDLPGHLLSYPIGVTNTGEVTCLAGVEFFPDTKARVCGSKSDFLPPILTT 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3995518 3997869 + Bpe022671.1 Bpe08g00570 107446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00570 783 SUPERFAMILY Phospholipase D/nuclease 453 617 - -
Bpe08g00570 783 Pfam Phospholipase D Active site motif 277 318 IPR001736 GO:0003824
Bpe08g00570 783 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 101 IPR035892 -
Bpe08g00570 783 SMART pld_4 628 657 IPR001736 GO:0003824
Bpe08g00570 783 SMART pld_4 277 318 IPR001736 GO:0003824
Bpe08g00570 783 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 277 318 IPR001736 GO:0003824
Bpe08g00570 783 SUPERFAMILY Phospholipase D/nuclease 105 396 - -
Bpe08g00570 783 Pfam Phospholipase D C terminal 702 773 IPR024632 -
Bpe08g00570 783 Pfam C2 domain 1 78 IPR000008 -
Bpe08g00570 783 PIRSF PLD_plant 1 623 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bpe08g00570 783 PIRSF PLD_plant 633 783 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bpe08g00570 783 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 639 657 IPR001736 GO:0003824
Bpe08g00570 783 Gene3D C2 domain 1 109 IPR035892 -
Bpe08g00570 783 Gene3D Endonuclease Chain A 147 401 - -
Bpe08g00570 783 SUPERFAMILY Phospholipase D/nuclease 640 714 - -
Bpe08g00570 783 Gene3D Endonuclease Chain A 422 617 - -
Bpe08g00570 783 ProSiteProfiles C2 domain profile. 1 76 IPR000008 -
Bpe08g00570 783 PANTHER PHOSPHOLIPASE D 1 617 - -
Bpe08g00570 783 PANTHER PHOSPHOLIPASE D 639 783 - -
Bpe08g00570 783 PANTHER PHOSPHOLIPASE D 1 617 IPR015679 -
Bpe08g00570 783 PANTHER PHOSPHOLIPASE D 639 783 IPR015679 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01247 Bpe-Chr2:16001717 Bpe08g00570 Bpe-Chr8:3995518 0 dispersed
Bpe05g00166 Bpe-Chr5:5121384 Bpe08g00570 Bpe-Chr8:3995518 0 dispersed
Bpe07g00133 Bpe-Chr7:940188 Bpe08g00570 Bpe-Chr8:3995518 0 dispersed
Bpe08g00570 Bpe-Chr8:3995518 Bpe10g00689 Bpe-Chr10:13372273 0 dispersed
Bpe08g00570 Bpe-Chr8:3995518 Bpe10g00609 Bpe-Chr10:12949089 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00570 K01115 - csin:114273855 1068.14