Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe08g00594 | ATTTCCTCCGGTAATTTTCCGTCTTATCTGCAGATTTCCTGTGGTTTAAGTTCCACATCTGGAAACTCTGGAAAAGGTAGAAGTAGGTCATCAATTACAAGAGTGAAATATGGATTTCACTTGATTGAAGGGAAATCGGGTCATAATATGGAGGATTATCATGTTGCTGAATACAAAAGAAAGAAAAATCACGAGCTTGGATTGTTTGCCATATTCGACGGTCACCTTGGGGATCGAGTCCCATACTTTTTGACACAGCATCTCTTCAATAACATACTTGATGAGCCAAATTTCATGATAGACCAAAAGCAGGCAATCAAGAATGCGTATCACTCCACTAATAAGGTTATCTTGGAAAACTCCATGCAATTGGGTCCTGGTGGCTCTACTGCAGTAACTGCAATAGTCATTGATGGCAAAGACTTATGGGTAGCAAACATCGGTGACTCAAGAGCTGTTGTGTGTGAGAGGGGCTCTGCTAATCAACTAACAGTAGACCATGAACCACGCAGTGAACGACCAAGGATAGAAAAGCAAGGTGGCTTTGTGATAACCTTACCTGGAGATGTGCCTAGAGTCAATGGTCAACTAGCAGTTGCTCGGGCTTTTGGGGATCAAAATCTAAAAGAACATTTAAGTGCAGATCCCGACATAAGACATGTTCCTATAGACTCTACGATTGAGTTTGTAATTTTGGCGAGTGACGGATTGTGGAAGGTTATGAATAATCAAGAGGCAGTTGATATGATCAAGGCCACTAAAGATCCTCAAGAAGCAGCGAAGCGATTAGCAAAGGAGGCATTGACGAGAAAAAGTAAAGATGATATATCATGCATTGTGATTCGGTTTGGATAA | 855 | 41.29 | ISSGNFPSYLQISCGLSSTSGNSGKGRSRSSITRVKYGFHLIEGKSGHNMEDYHVAEYKRKKNHELGLFAIFDGHLGDRVPYFLTQHLFNNILDEPNFMIDQKQAIKNAYHSTNKVILENSMQLGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGSANQLTVDHEPRSERPRIEKQGGFVITLPGDVPRVNGQLAVARAFGDQNLKEHLSADPDIRHVPIDSTIEFVILASDGLWKVMNNQEAVDMIKATKDPQEAAKRLAKEALTRKSKDDISCIVIRFG | 284 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 4303300 | 4306403 | + | Bpe022699.1 | Bpe08g00594 | 107470 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe08g00594 | 284 | PANTHER | PROTEIN PHOSPHATASE 2C 44-RELATED | 9 | 284 | - | - | |
| Bpe08g00594 | 284 | ProSiteProfiles | PPM-type phosphatase domain profile. | 36 | 283 | IPR001932 | - | |
| Bpe08g00594 | 284 | CDD | PP2Cc | 48 | 283 | IPR001932 | - | |
| Bpe08g00594 | 284 | Gene3D | - | 30 | 284 | IPR036457 | - | |
| Bpe08g00594 | 284 | PANTHER | PROTEIN PHOSPHATASE 2C | 9 | 284 | IPR015655 | GO:0004722|GO:0006470 | |
| Bpe08g00594 | 284 | SUPERFAMILY | PP2C-like | 27 | 284 | IPR036457 | - | |
| Bpe08g00594 | 284 | SMART | PP2C_4 | 32 | 281 | IPR001932 | - | |
| Bpe08g00594 | 284 | Pfam | Protein phosphatase 2C | 48 | 276 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe03g00180 | Bpe-Chr3:2211240 | Bpe08g00594 | Bpe-Chr8:4303300 | 1.52E-46 | dispersed | |
| Bpe04g00100 | Bpe-Chr4:714252 | Bpe08g00594 | Bpe-Chr8:4303300 | 3.08E-66 | dispersed | |
| Bpe08g00594 | Bpe-Chr8:4303300 | Bpe15g00676 | Bpe-Chr15:17425668 | 5.80E-112 | dispersed | |
| Bpe02g00108 | Bpe-Chr2:789816 | Bpe08g00594 | Bpe-Chr8:4303300 | 1.17E-112 | transposed | |
| Bpe05g00418 | Bpe-Chr5:18577432 | Bpe08g00594 | Bpe-Chr8:4303300 | 7.76E-106 | transposed | |
| Bpe01g00740 | Bpe-Chr1:6460606 | Bpe08g00594 | Bpe-Chr8:4303300 | 6.38E-158 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe08g00594 | K17506 | - | cpap:110811361 | 449.129 |