Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00599 AGTGGAAAAATGTTGGAGGGTAATCCTAAATTCACGGGAATTATTGATCTAAACAACCACGACTATGACTTCTCACAAGGGTTTTATCATAAACTGGACGAGGATACCAACATGTCAATTGATAGTTTTGCAAGCTTGCACGCTAGCAATGGCGGAGGGTCTGTCGCAATGTCTGTAGATAATAACAGTAGTGTTGCATCAAATGAATCCCATACTCGTATTTTGAACCACCCGGGTCTTCGGCGGCGAGCCAATGACAATTACACTGTGCAACAGAGTACACATAGGGGAAGAGTGACACATGCTCTAAGCGATGATGCACTTGCACGGGCTCTGTTTGACAGTAGCACCCCTACTCAAGGACTAGAAAGTTTTGAGGAGTGGACGATTGATTTGAGAAAACTTAATATGGGGGGAGCTTTTGCACAAGGAGCTTTTGGAAAACTTTATCGAGGTACTTACAATGGTGAAGATGTTGCTATCAAAATCTTGGAGAGGCCAGATAATGATAATGACAAGGCTCTGTTGATGGAGCAGCAGTTTCAGCAGGAGGTCATCATGTTGGCTACGTTGAAGCATCCAAATATAGTTCGTTTTATTGGTGGCTGTAGGAAGCCAATGCTTTGGTGCATTGTGACTGAATATGCAAAAGGTGGTTCAGTTCGACAATTCTTAATGAAGCGACAAAGTCGATCAGTTCCTCTTAAACTGGCAGTCAAGCAAGCTTTAGATGTGGCAAGGGGGATGGCATATGTTCATGGGCTTGGACTAATACATCGGGACTTAAAGTCTGACAACTTGTTGATTTCTGCAGATAAATCTATAAAAATTGCTGACTTTGGAGTAGCCCGAATTGAGGTGCAGACTGAAGGAATGACGCCTGAGACTGGCACATACCGCTGGATGGCTCCGGAGATGATCCAGCACAGGCCCTACACACAAAAAGTAGATGTGTATAGCTTTGGGATTGTTCTTTGGGAACTCATAACTGGAATGCTTCCGTTCCAAAATATGACGGCTGTACAGGCCGCATTTGCAGTTGTGAACAAGGGTTTTCGTCCTGTCATCCCAAACGATTGCTTGCCTGTTCTCAGCGAGATAATGACGCGCTGCTGGGATGCCAATCCAAATGTTAGACCGCACTTCACTGAGGTGGTCAGAATGCTGGAGCATGCCCAAACTGAGATCATGACAAGCATCCGAAAGGCCCGTTTTAGGTGTTGCATTGCCGAGCCTGTTACTGCCGACTGA 1251 45.24 SGKMLEGNPKFTGIIDLNNHDYDFSQGFYHKLDEDTNMSIDSFASLHASNGGGSVAMSVDNNSSVASNESHTRILNHPGLRRRANDNYTVQQSTHRGRVTHALSDDALARALFDSSTPTQGLESFEEWTIDLRKLNMGGAFAQGAFGKLYRGTYNGEDVAIKILERPDNDNDKALLMEQQFQQEVIMLATLKHPNIVRFIGGCRKPMLWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMAYVHGLGLIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGFRPVIPNDCLPVLSEIMTRCWDANPNVRPHFTEVVRMLEHAQTEIMTSIRKARFRCCIAEPVTAD 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4344504 4350081 + Bpe022704.1 Bpe08g00599 107475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00599 416 PANTHER SERINE-THREONINE PROTEIN KINASE 5 406 - -
Bpe08g00599 416 Gene3D Phosphorylase Kinase; domain 1 123 217 - -
Bpe08g00599 416 ProSiteProfiles Protein kinase domain profile. 135 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00599 416 SUPERFAMILY Protein kinase-like (PK-like) 117 389 IPR011009 -
Bpe08g00599 416 Pfam Protein tyrosine and serine/threonine kinase 137 389 IPR001245 GO:0004672|GO:0006468
Bpe08g00599 416 Gene3D Transferase(Phosphotransferase) domain 1 218 408 - -
Bpe08g00599 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Bpe08g00599 416 PRINTS Tyrosine kinase catalytic domain signature 316 338 IPR001245 GO:0004672|GO:0006468
Bpe08g00599 416 PRINTS Tyrosine kinase catalytic domain signature 213 226 IPR001245 GO:0004672|GO:0006468
Bpe08g00599 416 PRINTS Tyrosine kinase catalytic domain signature 251 269 IPR001245 GO:0004672|GO:0006468
Bpe08g00599 416 PRINTS Tyrosine kinase catalytic domain signature 297 307 IPR001245 GO:0004672|GO:0006468
Bpe08g00599 416 PRINTS Tyrosine kinase catalytic domain signature 360 382 IPR001245 GO:0004672|GO:0006468
Bpe08g00599 416 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 5 406 - -
Bpe08g00599 416 CDD STKc_MAP3K-like 142 389 - -
Bpe08g00599 416 SMART serkin_6 135 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00599 Bpe-Chr8:4344504 Bpe15g00632 Bpe-Chr15:17134552 3.49E-102 dispersed
Bpe03g00978 Bpe-Chr3:29312125 Bpe08g00599 Bpe-Chr8:4344504 4.85E-78 transposed
Bpe01g00737 Bpe-Chr1:6392102 Bpe08g00599 Bpe-Chr8:4344504 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63459 PF07714 PK_Tyr_Ser-Thr 1.40E-66 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00599 - - csv:101213713 723.391