Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00623 ATGTCTTCGAAATCTGGAAGTAGCAGCGCAACTCGTGTTGGGAAGTATGCATTAGGCCGTACTCTGGGCGAAGGTAACTTCGCCAAGGTTAAATTTGCTCGGAACATGGAGAGCGGCCAGAATGCGGCGATCAAAATCCTTGATAAGGAGAAACTTTTCAAGTACAAGATGATAGACCAGATTAAAAGAGAAATATCAACAATGAAACTAATCAGACATCCTAATGTCATCCGCATGTATGAGGTTATGGCTAGCAAGACCAAGATTTACATTGTCATGGAATTTGTTACTGGTGGAGAATTGTTTGGCAGAATTGCGAGTACAGGGAGATTTAGAGAAGATGAGGGAAGGAAGTACTTTCAGCAGCTTATTAATGCTGTTGATTATTGTCATAGCAGAGGTGTTTTTCATAGGGACCTAAAGCCTGAAAATTTGTTGCTGGATTCGAATGGAGTTCTTAAAGTTTCTGACTTTGGGTTGAGCGCTCTACCTCAACAAGTTCGAGGAGATGGACTGCTTTACACAACATGCGGAACCCCAAATTATGTTGCCCCAGAGGTGATCAATAACAAAGGTTACGATGGAGCGAAGGCAGATCTATGGTCATGTGGTGTAATTCTTTTTGTCCTAATGGCTGGTTACCTGCCCTTTGAAGACTCCAACCTCACAACATTGTACAAAAAGATACATAAAGCTGACTTCAGTTGTCCATCATGGTTTTCGACGGGTGCCAAGAAATTAATCAAGAGAATTTTAGATCCCAACCCTTCAACTCGAATTACCATTTCTGAGGTCATTGAGAATGAATGGTTTAAGAAAGGATATAAACCACCCGTTTTTGAACTTGCTGCTGTTCATTTTGATGATGTTGATGCTATGCTCGATGAATCAGGGGATACACCTAACCTTGTTGTAGAGAGCAGAGAAGAAAGGCCTATGGCTCCTGTCACCATGAATGCTTTTGAGCTTATCTCTACATCTCAGGGTCTCAACCTTGGGACACTTTTTGAGAAGCAAATGGGACTTGTCAAATGTGAAACGAGGTTCACATCCAAGTGTGCATTTAATGAGATCATTTCCAAAATTGACGATGTTGCAACTCCCTTGGGATTTAATGTGAAGAAAAATAACTTCAAGATGAAACTTCAAGGATGCAACATTGGTCGGAAAGGTCATTTATTAGTTGCAACAGAGATTTATGAAGTTGCCCCTTCGGTTTACATGGTTGAAGTTCGCAAGTCTGGGGGAGACACTTTAGAATTTCATGAGTTCTATAAAAATCTCTACACTGGGCTGAAAGATATAGTATGGAAAACTGATGATAACACAGTGGAAGCAACTGCTGCCTTTTGTTTACCTTCAGGTACTTCTGTTGTCAAATCTATGTAG 1389 40.82 MSSKSGSSSATRVGKYALGRTLGEGNFAKVKFARNMESGQNAAIKILDKEKLFKYKMIDQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVMEFVTGGELFGRIASTGRFREDEGRKYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGVLKVSDFGLSALPQQVRGDGLLYTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFEDSNLTTLYKKIHKADFSCPSWFSTGAKKLIKRILDPNPSTRITISEVIENEWFKKGYKPPVFELAAVHFDDVDAMLDESGDTPNLVVESREERPMAPVTMNAFELISTSQGLNLGTLFEKQMGLVKCETRFTSKCAFNEIISKIDDVATPLGFNVKKNNFKMKLQGCNIGRKGHLLVATEIYEVAPSVYMVEVRKSGGDTLEFHEFYKNLYTGLKDIVWKTDDNTVEATAAFCLPSGTSVVKSM 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5144494 5177882 - Bpe022730.2 Bpe08g00623 107499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00623 462 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00623 462 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00623 462 Gene3D Kinase associated domain 1, KA1 313 438 - -
Bpe08g00623 462 Pfam NAF domain 315 375 IPR004041 GO:0007165
Bpe08g00623 462 CDD STKc_SnRK3 15 270 - -
Bpe08g00623 462 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 443 - -
Bpe08g00623 462 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bpe08g00623 462 CDD CIPK_C 319 434 - -
Bpe08g00623 462 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00623 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Bpe08g00623 462 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Bpe08g00623 462 Gene3D Transferase(Phosphotransferase) domain 1 96 278 - -
Bpe08g00623 462 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Bpe08g00623 462 SUPERFAMILY Protein kinase-like (PK-like) 13 287 IPR011009 -
Bpe08g00623 462 PANTHER SERINE/THREONINE KINASE 10 443 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00745 Bpe08g00623 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00623 Bpe-Chr8:5144494 Bpe11g00973 Bpe-Chr11:7228150 0 dispersed
Bpe15g00890 Bpe-Chr15:18815845 Bpe08g00623 Bpe-Chr8:5144494 3.01E-70 dispersed
Bpe14g00529 Bpe-Chr14:4608707 Bpe08g00623 Bpe-Chr8:5144494 6.59E-40 transposed
Bpe14g00911 Bpe-Chr14:6827273 Bpe08g00623 Bpe-Chr8:5144494 2.60E-60 transposed
Bpe01g00862 Bpe-Chr1:17657866 Bpe08g00623 Bpe-Chr8:5144494 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63460 PF00069 Pkinase 9.70E-73 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00623 - - mnt:21394696 734.947