Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00623 | ATGTCTTCGAAATCTGGAAGTAGCAGCGCAACTCGTGTTGGGAAGTATGCATTAGGCCGTACTCTGGGCGAAGGTAACTTCGCCAAGGTTAAATTTGCTCGGAACATGGAGAGCGGCCAGAATGCGGCGATCAAAATCCTTGATAAGGAGAAACTTTTCAAGTACAAGATGATAGACCAGATTAAAAGAGAAATATCAACAATGAAACTAATCAGACATCCTAATGTCATCCGCATGTATGAGGTTATGGCTAGCAAGACCAAGATTTACATTGTCATGGAATTTGTTACTGGTGGAGAATTGTTTGGCAGAATTGCGAGTACAGGGAGATTTAGAGAAGATGAGGGAAGGAAGTACTTTCAGCAGCTTATTAATGCTGTTGATTATTGTCATAGCAGAGGTGTTTTTCATAGGGACCTAAAGCCTGAAAATTTGTTGCTGGATTCGAATGGAGTTCTTAAAGTTTCTGACTTTGGGTTGAGCGCTCTACCTCAACAAGTTCGAGGAGATGGACTGCTTTACACAACATGCGGAACCCCAAATTATGTTGCCCCAGAGGTGATCAATAACAAAGGTTACGATGGAGCGAAGGCAGATCTATGGTCATGTGGTGTAATTCTTTTTGTCCTAATGGCTGGTTACCTGCCCTTTGAAGACTCCAACCTCACAACATTGTACAAAAAGATACATAAAGCTGACTTCAGTTGTCCATCATGGTTTTCGACGGGTGCCAAGAAATTAATCAAGAGAATTTTAGATCCCAACCCTTCAACTCGAATTACCATTTCTGAGGTCATTGAGAATGAATGGTTTAAGAAAGGATATAAACCACCCGTTTTTGAACTTGCTGCTGTTCATTTTGATGATGTTGATGCTATGCTCGATGAATCAGGGGATACACCTAACCTTGTTGTAGAGAGCAGAGAAGAAAGGCCTATGGCTCCTGTCACCATGAATGCTTTTGAGCTTATCTCTACATCTCAGGGTCTCAACCTTGGGACACTTTTTGAGAAGCAAATGGGACTTGTCAAATGTGAAACGAGGTTCACATCCAAGTGTGCATTTAATGAGATCATTTCCAAAATTGACGATGTTGCAACTCCCTTGGGATTTAATGTGAAGAAAAATAACTTCAAGATGAAACTTCAAGGATGCAACATTGGTCGGAAAGGTCATTTATTAGTTGCAACAGAGATTTATGAAGTTGCCCCTTCGGTTTACATGGTTGAAGTTCGCAAGTCTGGGGGAGACACTTTAGAATTTCATGAGTTCTATAAAAATCTCTACACTGGGCTGAAAGATATAGTATGGAAAACTGATGATAACACAGTGGAAGCAACTGCTGCCTTTTGTTTACCTTCAGGTACTTCTGTTGTCAAATCTATGTAG | 1389 | 40.82 | MSSKSGSSSATRVGKYALGRTLGEGNFAKVKFARNMESGQNAAIKILDKEKLFKYKMIDQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVMEFVTGGELFGRIASTGRFREDEGRKYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGVLKVSDFGLSALPQQVRGDGLLYTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILFVLMAGYLPFEDSNLTTLYKKIHKADFSCPSWFSTGAKKLIKRILDPNPSTRITISEVIENEWFKKGYKPPVFELAAVHFDDVDAMLDESGDTPNLVVESREERPMAPVTMNAFELISTSQGLNLGTLFEKQMGLVKCETRFTSKCAFNEIISKIDDVATPLGFNVKKNNFKMKLQGCNIGRKGHLLVATEIYEVAPSVYMVEVRKSGGDTLEFHEFYKNLYTGLKDIVWKTDDNTVEATAAFCLPSGTSVVKSM | 462 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5144494 | 5177882 | - | Bpe022730.2 | Bpe08g00623 | 107499 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00623 | 462 | ProSiteProfiles | Protein kinase domain profile. | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00623 | 462 | Pfam | Protein kinase domain | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00623 | 462 | Gene3D | Kinase associated domain 1, KA1 | 313 | 438 | - | - | |
Bpe08g00623 | 462 | Pfam | NAF domain | 315 | 375 | IPR004041 | GO:0007165 | |
Bpe08g00623 | 462 | CDD | STKc_SnRK3 | 15 | 270 | - | - | |
Bpe08g00623 | 462 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 10 | 443 | - | - | |
Bpe08g00623 | 462 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 45 | IPR017441 | GO:0005524 | |
Bpe08g00623 | 462 | CDD | CIPK_C | 319 | 434 | - | - | |
Bpe08g00623 | 462 | SMART | serkin_6 | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00623 | 462 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 135 | 147 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe08g00623 | 462 | ProSiteProfiles | NAF domain profile. | 313 | 337 | IPR018451 | GO:0007165 | |
Bpe08g00623 | 462 | Gene3D | Transferase(Phosphotransferase) domain 1 | 96 | 278 | - | - | |
Bpe08g00623 | 462 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 95 | - | - | |
Bpe08g00623 | 462 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 287 | IPR011009 | - | |
Bpe08g00623 | 462 | PANTHER | SERINE/THREONINE KINASE | 10 | 443 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe01g00745 | Bpe08g00623 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe08g00623 | Bpe-Chr8:5144494 | Bpe11g00973 | Bpe-Chr11:7228150 | 0 | dispersed | |
Bpe15g00890 | Bpe-Chr15:18815845 | Bpe08g00623 | Bpe-Chr8:5144494 | 3.01E-70 | dispersed | |
Bpe14g00529 | Bpe-Chr14:4608707 | Bpe08g00623 | Bpe-Chr8:5144494 | 6.59E-40 | transposed | |
Bpe14g00911 | Bpe-Chr14:6827273 | Bpe08g00623 | Bpe-Chr8:5144494 | 2.60E-60 | transposed | |
Bpe01g00862 | Bpe-Chr1:17657866 | Bpe08g00623 | Bpe-Chr8:5144494 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63460 | PF00069 | Pkinase | 9.70E-73 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00623 | - | - | mnt:21394696 | 734.947 |