Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00654 | TTTGGATTCGCCATGATTGTAGAAAATCAAAGAAGTGGTTTGGCGGCTGAAAATGGATCCGCCGACGGATTCCCGGTGGGTTTGCGTGTTCTTGCCGTCGACGACGAGCCTATTTGCCTCAAAGTTTTGGAGAATCTGCTTCGCAGATGCAAATATCACGTTACCACAACAAATCAGGCGGTCCAGGCTCTGAAAATGTTGAGGGAAAACAGAAATATGTTTGACCTTGTTATCAGTGATGTAAATATGCCGGACATGGATGGATTTAAACTCCTTGACCATGTGGGGCTCGAAATGGACTTACCCGTTATCATGTTGTCAGCGCATAGCGATACCGAGCTTGTAATGAAGGGGGTCACTCATGGTGCTTGCGATTATTTGCTGAAACCTGTTCGAACTGAGGAGCTAAAGAACATATGGCAACATGTGATTCGAAGAAGGAAGTTTGATTTGAAAGAACAAAACAATTCCACCAATCAAAACATTTATCAGCAAGGAAACAGCGAAAGCGATCAAGCTTTTTCCTCGACCGAAAATGGAGAAAATGGGAAACTGAACAGAAAGCGGAAGGATCAAAACGAGGATGAAGAAGAGGAAGGGGAAGAGACTGAACATGAGAACGAAGACCCTTCAACCCAGAAGAAGCCCCGAGTAGTTTGGTCGGTCGAGTTGCACCGGAAATTTGTTGCAGCTGTTCATCAGCTCGGCCTCGATAAGGCTGTTCCGAAGAAGATACTTGATCTCATGAATGTTGAAGGACTCACAAGAGAAAATGTAGCCAGCCATTTGCAGAAATACAGGCTCTACCTGAAAAGAATCAGCAGTGTGGCAACCCAGCAAGCTAATATTGCTGCTGCTTTGGGAGTGAAAGATGCCTCTTACATGCGAATTGGGACGATTGACGGATTTGGAGACTTGTGCTCCTTAGCCGGAAATGGAAGATTTTCAAACACACCATTATCATCATATCCACCCAGTGGAATGCTCGGAAGATTGAATACACCAGCTGGATTGACCCTTCATGGAATCGCTTCTTCTGGGCTTGTCCAACAAGGCAATTCCCAAAACTTAAATAATCCAGCGACTACCCTTGGTAAAGTCGAGGCTGGAATGTGTTCTACGAATCAAACTCCAAGCATATTTCAAGGGATTCCTACTTCATTACAGGTCAGTCAGTTGCAGCCAGGAAAACCCAGTACTGTGATGAAAGAGTTTAACCCCATTAATGGTGGATCGGGTTTTACACTATCGAACAATTCTATATCCACTTCGTCTTTGGTATTACAAGGTAATATGACTCAAATACCAAGTAGGAGAGGATTTGGAGCTGAATCTTCTGCAAAAGTGACTTCATCGAGTCAAGATTCTTTCGATATTGGCATCAACGGTTCTAATAACTTAGATCACAATCGATGCGAAGAAAACTGGAATCACGCAGTTCAAATGTCCAGTTTCTCATTAAATCCGTTTGAGAATTACGCTCATGATCGATTGACTTCAAATAACATGAGTATTTCTACTACCCATTCTAGTATTGGGAGAGTTCCTATTGATTACTCTTCGACTTGTGCCGTTTTGGATCCTAAGCAGGATTCAAGTGGGGATCGATACCAAGAAGGGCTAATCGGAAATATTGTTCAAACAATGAATGTTCTTCCAAAACGAAGGTTGGAAGAAAATAGGCATGGTTTCCATCAAAATATGAATTATTCTTACACAGCTGTAGATTGTATGGGTTCTTCTGGTTTCTTAGGGTCGAGTATGGACCAAAATAATACAGCCGGTCGTAAAGTGTTTGATGTTTCTTTCAGTAATCATTTAATAACGGGCGGAGCTCCTTTATATGTTCAGCATGGGAACAGTCTCGTACATCAAGCTAAATCGCAGGATGGAGCTGTTCAAAGCAATTACGAATCATTTGATGATGTCATGAATGCAATGATCAAACAGGTATGGTCAAATATTTGGCTTAAATATAAAAAAACGTTCATTTTTGGATAA | 2001 | 41.98 | FGFAMIVENQRSGLAAENGSADGFPVGLRVLAVDDEPICLKVLENLLRRCKYHVTTTNQAVQALKMLRENRNMFDLVISDVNMPDMDGFKLLDHVGLEMDLPVIMLSAHSDTELVMKGVTHGACDYLLKPVRTEELKNIWQHVIRRRKFDLKEQNNSTNQNIYQQGNSESDQAFSSTENGENGKLNRKRKDQNEDEEEEGEETEHENEDPSTQKKPRVVWSVELHRKFVAAVHQLGLDKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISSVATQQANIAAALGVKDASYMRIGTIDGFGDLCSLAGNGRFSNTPLSSYPPSGMLGRLNTPAGLTLHGIASSGLVQQGNSQNLNNPATTLGKVEAGMCSTNQTPSIFQGIPTSLQVSQLQPGKPSTVMKEFNPINGGSGFTLSNNSISTSSLVLQGNMTQIPSRRGFGAESSAKVTSSSQDSFDIGINGSNNLDHNRCEENWNHAVQMSSFSLNPFENYAHDRLTSNNMSISTTHSSIGRVPIDYSSTCAVLDPKQDSSGDRYQEGLIGNIVQTMNVLPKRRLEENRHGFHQNMNYSYTAVDCMGSSGFLGSSMDQNNTAGRKVFDVSFSNHLITGGAPLYVQHGNSLVHQAKSQDGAVQSNYESFDDVMNAMIKQVWSNIWLKYKKTFIFG | 666 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6676192 | 6679302 | + | Bpe022768.1 | Bpe08g00654 | 107530 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00654 | 666 | Coils | Coil | 186 | 206 | - | - | |
Bpe08g00654 | 666 | Pfam | Myb-like DNA-binding domain | 217 | 267 | IPR001005 | - | |
Bpe08g00654 | 666 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 215 | 268 | IPR006447 | GO:0003677 | |
Bpe08g00654 | 666 | MobiDBLite | consensus disorder prediction | 155 | 215 | - | - | |
Bpe08g00654 | 666 | Pfam | Response regulator receiver domain | 30 | 138 | IPR001789 | GO:0000160 | |
Bpe08g00654 | 666 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 8 | 653 | - | - | |
Bpe08g00654 | 666 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 8 | 653 | IPR045279 | GO:0009736 | |
Bpe08g00654 | 666 | SUPERFAMILY | CheY-like | 27 | 151 | IPR011006 | - | |
Bpe08g00654 | 666 | MobiDBLite | consensus disorder prediction | 155 | 181 | - | - | |
Bpe08g00654 | 666 | ProSiteProfiles | Response regulatory domain profile. | 29 | 144 | IPR001789 | GO:0000160 | |
Bpe08g00654 | 666 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 212 | 271 | IPR017930 | - | |
Bpe08g00654 | 666 | Gene3D | - | 28 | 166 | - | - | |
Bpe08g00654 | 666 | PIRSF | RR_ARR_type-B | 6 | 664 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Bpe08g00654 | 666 | SUPERFAMILY | Homeodomain-like | 212 | 272 | IPR009057 | - | |
Bpe08g00654 | 666 | CDD | REC_typeB_ARR-like | 30 | 144 | - | - | |
Bpe08g00654 | 666 | SMART | REC_2 | 28 | 140 | IPR001789 | GO:0000160 | |
Bpe08g00654 | 666 | Gene3D | - | 211 | 274 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g02148 | Bpe08g00654 | CCT | |
Bpe01g00636 | Bpe08g00654 | CCT | |
Bpe02g02148 | Bpe08g00654 | ECH | |
Bpe01g00636 | Bpe08g00654 | ECH | |
Bpe08g00654 | Bpe13g01134 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g02148 | Bpe-Chr2:22793869 | Bpe08g00654 | Bpe-Chr8:6676192 | 2.01E-149 | dispersed | |
Bpe04g01103 | Bpe-Chr4:8822631 | Bpe08g00654 | Bpe-Chr8:6676192 | 6.53E-102 | dispersed | |
Bpe05g00823 | Bpe-Chr5:21502106 | Bpe08g00654 | Bpe-Chr8:6676192 | 2.98E-108 | dispersed | |
Bpe08g00654 | Bpe-Chr8:6676192 | Bpe13g01134 | Bpe-Chr13:16879739 | 7.40E-144 | dispersed | |
Bpe14g00722 | Bpe-Chr14:5610147 | Bpe08g00654 | Bpe-Chr8:6676192 | 1.30E-17 | dispersed | |
Bpe01g00636 | Bpe-Chr1:4288469 | Bpe08g00654 | Bpe-Chr8:6676192 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21758 | PF00072 | Response_reg | 2.90E-25 | CL0304 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00654 | K14491 | - | qsu:112019876 | 701.819 |