Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00654 TTTGGATTCGCCATGATTGTAGAAAATCAAAGAAGTGGTTTGGCGGCTGAAAATGGATCCGCCGACGGATTCCCGGTGGGTTTGCGTGTTCTTGCCGTCGACGACGAGCCTATTTGCCTCAAAGTTTTGGAGAATCTGCTTCGCAGATGCAAATATCACGTTACCACAACAAATCAGGCGGTCCAGGCTCTGAAAATGTTGAGGGAAAACAGAAATATGTTTGACCTTGTTATCAGTGATGTAAATATGCCGGACATGGATGGATTTAAACTCCTTGACCATGTGGGGCTCGAAATGGACTTACCCGTTATCATGTTGTCAGCGCATAGCGATACCGAGCTTGTAATGAAGGGGGTCACTCATGGTGCTTGCGATTATTTGCTGAAACCTGTTCGAACTGAGGAGCTAAAGAACATATGGCAACATGTGATTCGAAGAAGGAAGTTTGATTTGAAAGAACAAAACAATTCCACCAATCAAAACATTTATCAGCAAGGAAACAGCGAAAGCGATCAAGCTTTTTCCTCGACCGAAAATGGAGAAAATGGGAAACTGAACAGAAAGCGGAAGGATCAAAACGAGGATGAAGAAGAGGAAGGGGAAGAGACTGAACATGAGAACGAAGACCCTTCAACCCAGAAGAAGCCCCGAGTAGTTTGGTCGGTCGAGTTGCACCGGAAATTTGTTGCAGCTGTTCATCAGCTCGGCCTCGATAAGGCTGTTCCGAAGAAGATACTTGATCTCATGAATGTTGAAGGACTCACAAGAGAAAATGTAGCCAGCCATTTGCAGAAATACAGGCTCTACCTGAAAAGAATCAGCAGTGTGGCAACCCAGCAAGCTAATATTGCTGCTGCTTTGGGAGTGAAAGATGCCTCTTACATGCGAATTGGGACGATTGACGGATTTGGAGACTTGTGCTCCTTAGCCGGAAATGGAAGATTTTCAAACACACCATTATCATCATATCCACCCAGTGGAATGCTCGGAAGATTGAATACACCAGCTGGATTGACCCTTCATGGAATCGCTTCTTCTGGGCTTGTCCAACAAGGCAATTCCCAAAACTTAAATAATCCAGCGACTACCCTTGGTAAAGTCGAGGCTGGAATGTGTTCTACGAATCAAACTCCAAGCATATTTCAAGGGATTCCTACTTCATTACAGGTCAGTCAGTTGCAGCCAGGAAAACCCAGTACTGTGATGAAAGAGTTTAACCCCATTAATGGTGGATCGGGTTTTACACTATCGAACAATTCTATATCCACTTCGTCTTTGGTATTACAAGGTAATATGACTCAAATACCAAGTAGGAGAGGATTTGGAGCTGAATCTTCTGCAAAAGTGACTTCATCGAGTCAAGATTCTTTCGATATTGGCATCAACGGTTCTAATAACTTAGATCACAATCGATGCGAAGAAAACTGGAATCACGCAGTTCAAATGTCCAGTTTCTCATTAAATCCGTTTGAGAATTACGCTCATGATCGATTGACTTCAAATAACATGAGTATTTCTACTACCCATTCTAGTATTGGGAGAGTTCCTATTGATTACTCTTCGACTTGTGCCGTTTTGGATCCTAAGCAGGATTCAAGTGGGGATCGATACCAAGAAGGGCTAATCGGAAATATTGTTCAAACAATGAATGTTCTTCCAAAACGAAGGTTGGAAGAAAATAGGCATGGTTTCCATCAAAATATGAATTATTCTTACACAGCTGTAGATTGTATGGGTTCTTCTGGTTTCTTAGGGTCGAGTATGGACCAAAATAATACAGCCGGTCGTAAAGTGTTTGATGTTTCTTTCAGTAATCATTTAATAACGGGCGGAGCTCCTTTATATGTTCAGCATGGGAACAGTCTCGTACATCAAGCTAAATCGCAGGATGGAGCTGTTCAAAGCAATTACGAATCATTTGATGATGTCATGAATGCAATGATCAAACAGGTATGGTCAAATATTTGGCTTAAATATAAAAAAACGTTCATTTTTGGATAA 2001 41.98 FGFAMIVENQRSGLAAENGSADGFPVGLRVLAVDDEPICLKVLENLLRRCKYHVTTTNQAVQALKMLRENRNMFDLVISDVNMPDMDGFKLLDHVGLEMDLPVIMLSAHSDTELVMKGVTHGACDYLLKPVRTEELKNIWQHVIRRRKFDLKEQNNSTNQNIYQQGNSESDQAFSSTENGENGKLNRKRKDQNEDEEEEGEETEHENEDPSTQKKPRVVWSVELHRKFVAAVHQLGLDKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISSVATQQANIAAALGVKDASYMRIGTIDGFGDLCSLAGNGRFSNTPLSSYPPSGMLGRLNTPAGLTLHGIASSGLVQQGNSQNLNNPATTLGKVEAGMCSTNQTPSIFQGIPTSLQVSQLQPGKPSTVMKEFNPINGGSGFTLSNNSISTSSLVLQGNMTQIPSRRGFGAESSAKVTSSSQDSFDIGINGSNNLDHNRCEENWNHAVQMSSFSLNPFENYAHDRLTSNNMSISTTHSSIGRVPIDYSSTCAVLDPKQDSSGDRYQEGLIGNIVQTMNVLPKRRLEENRHGFHQNMNYSYTAVDCMGSSGFLGSSMDQNNTAGRKVFDVSFSNHLITGGAPLYVQHGNSLVHQAKSQDGAVQSNYESFDDVMNAMIKQVWSNIWLKYKKTFIFG 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6676192 6679302 + Bpe022768.1 Bpe08g00654 107530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00654 666 Coils Coil 186 206 - -
Bpe08g00654 666 Pfam Myb-like DNA-binding domain 217 267 IPR001005 -
Bpe08g00654 666 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 215 268 IPR006447 GO:0003677
Bpe08g00654 666 MobiDBLite consensus disorder prediction 155 215 - -
Bpe08g00654 666 Pfam Response regulator receiver domain 30 138 IPR001789 GO:0000160
Bpe08g00654 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 653 - -
Bpe08g00654 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 653 IPR045279 GO:0009736
Bpe08g00654 666 SUPERFAMILY CheY-like 27 151 IPR011006 -
Bpe08g00654 666 MobiDBLite consensus disorder prediction 155 181 - -
Bpe08g00654 666 ProSiteProfiles Response regulatory domain profile. 29 144 IPR001789 GO:0000160
Bpe08g00654 666 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 271 IPR017930 -
Bpe08g00654 666 Gene3D - 28 166 - -
Bpe08g00654 666 PIRSF RR_ARR_type-B 6 664 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bpe08g00654 666 SUPERFAMILY Homeodomain-like 212 272 IPR009057 -
Bpe08g00654 666 CDD REC_typeB_ARR-like 30 144 - -
Bpe08g00654 666 SMART REC_2 28 140 IPR001789 GO:0000160
Bpe08g00654 666 Gene3D - 211 274 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02148 Bpe08g00654 CCT
Bpe01g00636 Bpe08g00654 CCT
Bpe02g02148 Bpe08g00654 ECH
Bpe01g00636 Bpe08g00654 ECH
Bpe08g00654 Bpe13g01134 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02148 Bpe-Chr2:22793869 Bpe08g00654 Bpe-Chr8:6676192 2.01E-149 dispersed
Bpe04g01103 Bpe-Chr4:8822631 Bpe08g00654 Bpe-Chr8:6676192 6.53E-102 dispersed
Bpe05g00823 Bpe-Chr5:21502106 Bpe08g00654 Bpe-Chr8:6676192 2.98E-108 dispersed
Bpe08g00654 Bpe-Chr8:6676192 Bpe13g01134 Bpe-Chr13:16879739 7.40E-144 dispersed
Bpe14g00722 Bpe-Chr14:5610147 Bpe08g00654 Bpe-Chr8:6676192 1.30E-17 dispersed
Bpe01g00636 Bpe-Chr1:4288469 Bpe08g00654 Bpe-Chr8:6676192 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21758 PF00072 Response_reg 2.90E-25 CL0304 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00654 K14491 - qsu:112019876 701.819