Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00661 ATGATGGAGCAGATCAAGAGGGAAATCTCTGTGATGAAGATGGTGAAGCATCCCAATATCGTTGAGCTTCACGAGATTATGGCGAGTAAAACCAATATCTACTTTTCCATGGAGCTCGTCCGTGGCGGCGAGCTCTTCGCTAAGGTCGCCAAAGGCCGCCTGAGAGAAAACGTCGCCAGAGTCTATTTCCACCAGCTTATATCGGCGATAGATTTTTGCCACAGTCGCGGTGTTTTCCACCGCGATTTGAAGCCAGAGAATCTTCTTCTCAACGAAGATGGAAACCTCAAAGTCACCGATTTCGGACTTAGCGCCGTCTCCGACCACTTGAAGGACGGATTACTCCACACAACCTGCGGCACCCCGGCGTACGTTGCGCCGGAAGTGATCGGAAAGAAGGGATACGACGGCTCCAAAGCCGATCTCTGGTCTTGCGGAGTTATTCTCTACGTGCTCCTCGCCGGATTTCTTCCTTTCCAGGACGATAATCTGGTCACTATGTACAGAAAAATTTACAAGGGCGACTTCAGATGTCCGCCATGGTTCTCTGCTGAAGCTCGAAGGCTCATAATCAAGCTTCTAGACCCGAACCCGACGACCCGGATAACTATAGCGAAGATCATGGACTCCTCCTGGTTTAAGAGATCGGTTCCGAAATCCATAATCACGAAAGAGGAGCAGGTATTGGGCAAAAAATGCGACAAAATAATGAACGAAAGAGAGACCTTAAATGCATTTCACATAATATCGCTATCCGAGGGGTTCGACCTATCGCCATTATTCGAGGAGAAAACGAGGAAGGAGAAAGAGGAGATGAGATTTGCGACGACGAGGCCGGCGAGTAGCGTGATATCAAAGCTGGAGGAGGTTGCAGAGGCGGTAAAGTTCGACGTCCAGAAGAGCAACTCCATGGTTAGGTTGCAGGGGAAGGAGCGAGGAAGAAAGGGGAAGTTGGCAATAGAGGCGGAGTTATTCGCAGTGGCGCCCTCGTTTCTGGTGGTGGAGGTGAAGAAGGACAATGGGGACACGTGGGAGTACAACGAATTCTGCAGCAACAAGCTTCGTCCTGCTCTGAAAGAAGTTCTCTGGACTTCTCCTCCGGAAAAGTCCATGCCTGCTGTTGCATGA 1128 50.27 MMEQIKREISVMKMVKHPNIVELHEIMASKTNIYFSMELVRGGELFAKVAKGRLRENVARVYFHQLISAIDFCHSRGVFHRDLKPENLLLNEDGNLKVTDFGLSAVSDHLKDGLLHTTCGTPAYVAPEVIGKKGYDGSKADLWSCGVILYVLLAGFLPFQDDNLVTMYRKIYKGDFRCPPWFSAEARRLIIKLLDPNPTTRITIAKIMDSSWFKRSVPKSIITKEEQVLGKKCDKIMNERETLNAFHIISLSEGFDLSPLFEEKTRKEKEEMRFATTRPASSVISKLEEVAEAVKFDVQKSNSMVRLQGKERGRKGKLAIEAELFAVAPSFLVVEVKKDNGDTWEYNEFCSNKLRPALKEVLWTSPPEKSMPAVA 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6880093 6881220 - Bpe022776.1 Bpe08g00661 107537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00661 375 SUPERFAMILY Protein kinase-like (PK-like) 2 226 IPR011009 -
Bpe08g00661 375 CDD CIPK_C 244 359 - -
Bpe08g00661 375 Gene3D Phosphorylase Kinase; domain 1 1 44 - -
Bpe08g00661 375 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 370 - -
Bpe08g00661 375 Pfam NAF domain 241 300 IPR004041 GO:0007165
Bpe08g00661 375 Gene3D Transferase(Phosphotransferase) domain 1 45 240 - -
Bpe08g00661 375 Gene3D Kinase associated domain 1, KA1 241 364 - -
Bpe08g00661 375 Pfam Protein kinase domain 3 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00661 375 SMART serkin_6 3 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00661 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Bpe08g00661 375 ProSiteProfiles NAF domain profile. 238 262 IPR018451 GO:0007165
Bpe08g00661 375 PANTHER - 1 370 - -
Bpe08g00661 375 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00661 Bpe-Chr8:6880093 Bpe11g01580 Bpe-Chr11:11867642 6.31E-159 dispersed
Bpe01g00643 Bpe-Chr1:4332488 Bpe08g00661 Bpe-Chr8:6880093 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63461 PF00069 Pkinase 1.10E-60 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00661 - K07198 mnt:21393291 622.468