Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00665 ATGGCCGGACAACAAAGCTTCGAAGCTTCGCAGGTGGAACACGCAAAGCCACACGAAGGAGAAGAAGAAGAAGGTGTCGGAGAATCAGGGGAAGAATCAGAAGGCGATGAAGAGGAAGGAGGAGGAGTTTTCGAATTGCGGCGCTGTGACGGTGAGATACTTAGTATTCTGCCTTTTGCTGATGCAGAATCCAGAGAATCTCATTTAGAATCCTCGAGAAAATCCTCTGCTCTTCAATTCTCTGGGAACGGTCTGCGTGACGGTTTTCAGTCAAATTGCGGTTCACAGATAAGTGCAAGAACTGGGTTAAAGGTCTCCCAGGATCAAGTGCAAAATCAAATTCAGTTTTCTTCAGGTCCAACAACTTCATCAGATTGGTCACCAACATCAGTTACGCAATCTATTCAATCTCTGCCAATTCCGATGTTGGAGAAAGTAATTTCATCACCAGTAACCAATCGTGAATCTATGCCTGAATCAATTCAAAAGAATTTTACCACCCTTAAATCAACTCCTGTACCCATATTGAAGAGGTCTGCCTCCGATGGTTTCAACTGGAGGAAATACGGTCAAAAACAAGTAAAGAGTCCCAGAGGTTCTCGTAGCTATTATAAGTGCACTTACTTGGAATGCCTTGCTAAAAAAATTGAATGCTGTGACCACTCAGGAAATGTAACAGAGATTGTTTACAAAAGCCAGCATAATCATGATCCCCCAAGGAAGATTAGCCGCATGAGGGAAAGCAAGCTTCTCTCATCTGACGATTCTGTTGTCACAGATGTAGAACACAGTAGAACAGCTGAAAATACAGACCCATCTACATCTTTAAAAGAACCTGACCAAGAAAAATCTGCTGTTTCTGAATTTGAAAGAAAACGAGAGCATTCAATCTCCTACTCTAATGGGATTGGTGATATTGTTGTCAAAGAGGAAGCCTTAAATGCACCAGAACCAAAGAGAAGGGTGAAGAAAAGCAATACAGAACGTTCAGGTTCACTTTTCAAACTAGGGAAGAAGCAAAAATTTGTTGTGCATGCAGCCGTTGATGTGGGGATTTCAGGTGATGGATACAGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGAAATCCTCACCCTCGAAACTACTACAGATGCACTTCAGCTGGATGTCCTGTCCGTAAGCACATTGAGACAGCTGTTGATAACCCAAGTTCTGTAATCATAACCTATAAGGGTGTACATGACCATGACATGCCTGTGCCAAAGAAACGACACGGCCCGCCAAGTGCACCTTTAGTTGCTGCTTCAGCTCCTGCTTCCATGAACAACATACCAGTCAAAAAAACTGAAATATTGCAAAACCAAATGCCTTCAACACAGTGGTCTGTTGACACCAAGGGAGGATTAACTGGCGAGGCTTTGGACCTTGGAGGTGATAATGCAATAGAATCAGCTCGAACTCTTTTGAGCATGGGATTCGAAATAAAACCGTGCTGA 1479 43.27 MAGQQSFEASQVEHAKPHEGEEEEGVGESGEESEGDEEEGGGVFELRRCDGEILSILPFADAESRESHLESSRKSSALQFSGNGLRDGFQSNCGSQISARTGLKVSQDQVQNQIQFSSGPTTSSDWSPTSVTQSIQSLPIPMLEKVISSPVTNRESMPESIQKNFTTLKSTPVPILKRSASDGFNWRKYGQKQVKSPRGSRSYYKCTYLECLAKKIECCDHSGNVTEIVYKSQHNHDPPRKISRMRESKLLSSDDSVVTDVEHSRTAENTDPSTSLKEPDQEKSAVSEFERKREHSISYSNGIGDIVVKEEALNAPEPKRRVKKSNTERSGSLFKLGKKQKFVVHAAVDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNPSSVIITYKGVHDHDMPVPKKRHGPPSAPLVAASAPASMNNIPVKKTEILQNQMPSTQWSVDTKGGLTGEALDLGGDNAIESARTLLSMGFEIKPC 492
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 7088375 7092202 + Bpe022782.1 Bpe08g00665 107541
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00665 492 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 490 IPR044810 GO:0003700
Bpe08g00665 492 ProSiteProfiles WRKY domain profile. 181 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe08g00665 492 MobiDBLite consensus disorder prediction 230 293 - -
Bpe08g00665 492 MobiDBLite consensus disorder prediction 1 45 - -
Bpe08g00665 492 ProSiteProfiles WRKY domain profile. 348 413 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe08g00665 492 MobiDBLite consensus disorder prediction 24 39 - -
Bpe08g00665 492 SUPERFAMILY WRKY DNA-binding domain 180 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe08g00665 492 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe08g00665 492 SMART WRKY_cls 353 412 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe08g00665 492 Pfam WRKY DNA -binding domain 182 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe08g00665 492 Pfam WRKY DNA -binding domain 355 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe08g00665 492 SUPERFAMILY WRKY DNA-binding domain 346 413 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe08g00665 492 MobiDBLite consensus disorder prediction 233 267 - -
Bpe08g00665 492 Gene3D WRKY domain 174 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe08g00665 492 Gene3D WRKY domain 338 414 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe08g00665 492 MobiDBLite consensus disorder prediction 275 293 - -
Bpe08g00665 492 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 22 490 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02123 Bpe-Chr2:22613758 Bpe08g00665 Bpe-Chr8:7088375 2.79E-09 dispersed
Bpe08g00665 Bpe-Chr8:7088375 Bpe09g00135 Bpe-Chr9:910747 1.60E-47 dispersed
Bpe08g00665 Bpe-Chr8:7088375 Bpe11g01442 Bpe-Chr11:10705132 4.91E-14 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21760 PF03106 WRKY 6.00E-24 CL0274 Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00665 - - qlo:115977254 514.227