Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00675 ATGGCTCTCCGGCTCTTTCTTCTCGTTCTTCTCTATTCCTCCATACTTTGCTTTTCGTATGAGCTTCGAAACCCTGAAGTGGAGGCTCTGATAAGCATAAAAACTGCATTGAATGATCCTCGTGGAGTTCTAACCAACTGGGACGAATTCTCTGTCGATCCTTGTAGCTGGACGATGATAACTTGCTCAACTGAGAATCTTGTGATTGGATTAGGAGCTCCGAGCCAGTCTTTGTCTGGAACTTTATCTTGGGCTATTGGCAATCTCACTAATCTTCGACAAGTGTTGTTGCAGAACAACAACATTTCAGGCACAATTCCCCCGGAATTAGGAGCTCTTCCCATGCTTCAGACGTTAGATCTTTCTAACAATAGGTTCTCTGGAGTAGTTCCTCAGACTTTGGGTCAGTTGAATGGTCTCCACTATCTGAGACTCAACAACAATAGCTTATCTGGGCCTTTTCCCATGTCTTTAGCCAAGATTTCTCAGCTTGCTTTCTTGGATTTGTCGTTTAACAGTCTCAGTGGTCCGGTGCCGAAATTTCCTCTTAAAACATTCAATGTTGTGGGAAACCCATTGATTTGTGGAAGCAGCTCTGCTGAAAGTTGTTCTGGATCATCTACCCCTGTTCCTCTTTCATTTGCTCTAGACTCATCATCTCCTGGAAGACAAAAGTCTAAAAAACTTGCAATTTCCCTTGGGATCAGTCTCAGCTGTGCATTTTTAGTTCTCATAGCTCTCGGAATTCTTTGGCGAAGAAAAAGGCTAAAAAACCAATCAATCTTGCTCATAAACGAAAACCAGGAAGTGGGACTAATGAGCTTAGGCAACCTAAGAAACTTCACTTTCAAAGAACTCCAGTCAGCAACAGACCATTTCAGCTCCAAGAACATTCTTGGTGCTGGAGGCTTTGGTAATGTATATAAAGGAAATTTGAGCGACGGGATGATAGTGGCAGTGAAACGACTCAAAGATGTCACTGGAACAACCGGCGAATCCCAATTTCGGACAGAGTTAGAAATGATCAGTTTGGCCGTCCATCGGAATTTGCTTCGCTTGATTGGCTACTGTGCCACTTCACATGAGAAGCTCTTGGTTTACCCTTACATGTCTAATGGCAGTGTGGCTGCTTGCCTTAGAGGAAAACCAGCATTAGATTGGAATACAAGGAAGAGAATAGCAATTGGAGCTGCAAGGGGATTGCTATATCTACATGAGCAATGTGATCCAAAGATAATTCATAGAGATGTGAAGGCTGCAAATATTCTTCTCGACGATTTCTATGAAGCTGTGGTTGGCGATTTTGGCTTGGCAAAGCTGCTCGACCATGCTGATTCACACGTGACCACCGCCGTTCGTGGCACTGTTGGGCACATTGCACCGGAATACCTCTCCACTGGTCAGTCGTCTGAGAAAACCGATGTTTTTGGATTTGGAATTCTGTTGTTGGAGCTTATAACTGGTATGAGAGCTCTTGACTTTGGCAAAACGATTAATCAGAAAGGTGCTATGCTTGAGTGGGTGAAGAAGATACAACAAGAGAATAAAGTGGAGTTAGCGGTGGACAGACAGCTGGGGAACAACTATGACAAGATAGAAGTTGTTGAAATGTTGCAAGTAGCTCTTCTTTGCACTCACTACCTTCCGGCTCATCGCCCTAAGATGTCTGAAGTGGTTCGAATGCTTGAAGGCGACGGCCTCGTCGAGAAATGGGCTGCCTCGAACAATCACACAAATCCCAACATCAACCTCTTCCAAACCCAAAACACAAACAAAAGCACACTTAGAACTTTGTCAGCAACTAAGCAGGACAGCGATGATCGCGATTGTTCAAGCATGTTCACTGCCGGTTTGGATGAAGACGATGATGATCGGTCAATGGATTCCTATCTCATGGAACTTTCAGGTCCGAGGTGA 1917 44.34 MALRLFLLVLLYSSILCFSYELRNPEVEALISIKTALNDPRGVLTNWDEFSVDPCSWTMITCSTENLVIGLGAPSQSLSGTLSWAIGNLTNLRQVLLQNNNISGTIPPELGALPMLQTLDLSNNRFSGVVPQTLGQLNGLHYLRLNNNSLSGPFPMSLAKISQLAFLDLSFNSLSGPVPKFPLKTFNVVGNPLICGSSSAESCSGSSTPVPLSFALDSSSPGRQKSKKLAISLGISLSCAFLVLIALGILWRRKRLKNQSILLINENQEVGLMSLGNLRNFTFKELQSATDHFSSKNILGAGGFGNVYKGNLSDGMIVAVKRLKDVTGTTGESQFRTELEMISLAVHRNLLRLIGYCATSHEKLLVYPYMSNGSVAACLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDFYEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALDFGKTINQKGAMLEWVKKIQQENKVELAVDRQLGNNYDKIEVVEMLQVALLCTHYLPAHRPKMSEVVRMLEGDGLVEKWAASNNHTNPNINLFQTQNTNKSTLRTLSATKQDSDDRDCSSMFTAGLDEDDDDRSMDSYLMELSGPR 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7434258 7437941 + Bpe022790.1 Bpe08g00675 107551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00675 638 ProSiteProfiles Protein kinase domain profile. 293 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00675 638 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 638 - -
Bpe08g00675 638 Pfam Protein tyrosine and serine/threonine kinase 296 562 IPR001245 GO:0004672|GO:0006468
Bpe08g00675 638 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Bpe08g00675 638 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Bpe08g00675 638 SMART serkin_6 293 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00675 638 MobiDBLite consensus disorder prediction 599 638 - -
Bpe08g00675 638 SUPERFAMILY L domain-like 24 188 - -
Bpe08g00675 638 MobiDBLite consensus disorder prediction 601 620 - -
Bpe08g00675 638 PRINTS Leucine-rich repeat signature 116 129 - -
Bpe08g00675 638 PRINTS Leucine-rich repeat signature 161 174 - -
Bpe08g00675 638 Gene3D Ribonuclease Inhibitor 23 205 IPR032675 -
Bpe08g00675 638 Gene3D Transferase(Phosphotransferase) domain 1 370 580 - -
Bpe08g00675 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Bpe08g00675 638 Gene3D Phosphorylase Kinase; domain 1 263 369 - -
Bpe08g00675 638 SUPERFAMILY Protein kinase-like (PK-like) 273 563 IPR011009 -
Bpe08g00675 638 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 638 - -
Bpe08g00675 638 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00675 Bpe-Chr8:7434258 Bpe11g01195 Bpe-Chr11:8910403 0 dispersed
Bpe12g00431 Bpe-Chr12:9917008 Bpe08g00675 Bpe-Chr8:7434258 5.69E-44 dispersed
Bpe08g00675 Bpe-Chr8:7434258 Bpe13g00502 Bpe-Chr13:12415241 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63463 PF00069 Pkinase 5.70E-42 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00675 - - csv:101218629 1008.05