Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00686 ATGGGATTTGAGTTACAGAGAGTGAAGAACTTCGGAGGAGGATGTAGTATAGCGGGGAAGCCATGCGACTACTGCAACTCCACTGCAGCCACCATCTTCTGCCGGTCGCACTCCGCTTTTCTCTGCCTCCATTGCGACTCCAAGCTTCACTCATCCCACCATGACCTACTTTCTCGCCATGAACGCGTCTGGGTATGTGAAGTCTGCGAGCAGGCTCCTGCATCCGTCACCTGTAAGGCGGATGCCGCCGCTCTCTGCATCACCTGCGACGTCGACATCCACTCTGCCAACCCTCTTGCTAGTCGCCACGAGAGGATCCCTGTCGAGCCGTTTTTAGACTCGCACGACCCCATCGCCAAACCCTCCGCCTCTGCCGCCCTCGCCTTTGTCGACTCCGCTGCTGGTGTTGTGAATTGCTGTCGTTCTGATGACGCTGAGGCCGGATTGTGGCTTTTTCAGAGCGCAAATTCCAGCTCGAAACTTCTGGATGGCCAGGATCTGAAATCGGGAGAGATTTTCTTCTCCGAAATGGATTCTTTCATCGATGTTGAGTATCCCGACCTGATTTCTTCTAATAGCTCCGGCACCGCTGATCGCTTCGTACCAGTTCATTCGACGACATTGTCTTCAACGCCTCAGATCCGCCACCCTCAAGAATCCTCCTTCGAAATCGATTTTTCCAGATCGAAAATCAATTCGTTTCGCCATCCAACTCAATCGTCCATTAGCCAATGCGTCTCATCATCGTCATTAGAAGTCGGAGTTGTCCCGGACAGGAGCTCCGTGTCCGATATATCGCCGCCGTTCATTAGAAACTTTATTAACGTTTCTGATCCGAACGCCACATCATCAACGGCGACGAATAAAGCAACTACAGCGAGCGGTTTAGATAGGGAGGCCAGAGTTATGAGGTACAGAGAGAAGAGGAAGAATCGGCGATTCGAGAAGACCATTCGCTACGCTTCGAGGAAAGCATACGCCGAAACTCGACCGAGAATCAAAGGCAGATTCGCGAAACGTAAGGAAATGGCCGAGGAAGAGGACTGCATCTACAGCCTTGCTTCGACAGCTTTCATGGCGGACGCACAATACGGCGTCGTTCCTATCTTTTAA 1113 52.02 MGFELQRVKNFGGGCSIAGKPCDYCNSTAATIFCRSHSAFLCLHCDSKLHSSHHDLLSRHERVWVCEVCEQAPASVTCKADAAALCITCDVDIHSANPLASRHERIPVEPFLDSHDPIAKPSASAALAFVDSAAGVVNCCRSDDAEAGLWLFQSANSSSKLLDGQDLKSGEIFFSEMDSFIDVEYPDLISSNSSGTADRFVPVHSTTLSSTPQIRHPQESSFEIDFSRSKINSFRHPTQSSISQCVSSSSLEVGVVPDRSSVSDISPPFIRNFINVSDPNATSSTATNKATTASGLDREARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKRKEMAEEEDCIYSLASTAFMADAQYGVVPIF 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7847358 7848559 - Bpe022801.1 Bpe08g00686 107562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00686 370 ProSiteProfiles CCT domain profile. 298 340 IPR010402 GO:0005515
Bpe08g00686 370 CDD Bbox1_BBX-like 21 65 - -
Bpe08g00686 370 CDD Bbox1_BBX-like 65 108 - -
Bpe08g00686 370 ProSiteProfiles Zinc finger B-box type profile. 61 108 IPR000315 GO:0008270
Bpe08g00686 370 SMART bboxneu5 61 108 IPR000315 GO:0008270
Bpe08g00686 370 SMART bboxneu5 17 58 IPR000315 GO:0008270
Bpe08g00686 370 Pfam CCT motif 298 340 IPR010402 GO:0005515
Bpe08g00686 370 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 7 370 IPR045281 GO:0009909
Bpe08g00686 370 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Bpe08g00686 370 Pfam B-box zinc finger 63 108 IPR000315 GO:0008270
Bpe08g00686 370 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 7 370 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g00686 Bpe13g01202 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00686 Bpe-Chr8:7847358 Bpe14g00128 Bpe-Chr14:1750730 2.66E-72 dispersed
Bpe13g01202 Bpe-Chr13:17372137 Bpe08g00686 Bpe-Chr8:7847358 1.98E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21761 PF00643 zf-B_box 6.10E-07 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00686 - - zju:107415202 379.022