Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00725 ATGATTCAGAGAAGAAACAAAACACCTTTGCTTCACTGCTTTGTTGCTGCATCTATGAAAAAAGATGCGGATGCTCAAATCCCGAACTACCCAAATCTTCTGCCAAAGATTCTGTGCCTCCTTCACAATGTCACTTTACATGCTGATCCAGAAACGGATGAAGTATATGCGCAAATGACTTTACAACCAGTTTCCTCGTTGGATAAGGATGCATTACTGAGATCCGATCTTGCACTCAAGTCTAATAAGCCGCAGCCTGAATTTTTCTGTAAGACGTTGACGGCAAGCGATACAAGCACTCATGGAGGATTTTCAGTTCCTCGTCGTGCGGCGGAGAAAATTTTCCCACTTCTTGATTTCTCCTTGCAGCCACCGGCTCAAGAACTTACGGCAAGGGATTTGCACGATAATGTGTGGAGGTTTCGTCATATCTATCGCGGACAACCGAAACGCCATTTGCTGACAACTGGTTGGAGCCTATTTGTCAGTGGAAAGAGGCTTCTTGCTGGCGACTCTGTTTTGTTCATTAGGGATGAAAGGCAGCAGCTGCTTCTGGGAATTAGACGGGCTAACAGGCAGCCCACCAACTTATCGTCATCTGTCCTGTCGAGCGATAGCATGCATATCGGAATTCTTGCTGCCGCAGCTCATGCAGCTGCCAACTATAGCCCCTTCAATGTCTTTTACAATCCAAGGGCGAGTCCTTCGGAATTCGTTATACCTCTAGCAAAATACTACAAAGCTGTCTATGGAAATCAATTATCGCTCGGCATGCGTTTCCGGATGATGTTCGAAACTGAAGATTCCGGAACCAGAAGGTATATGGGCACAATTACAGGCATCTGTGATCTTGATCCCATCAGATGGAAGAACTCTCAATGGCGCAATCTGCAGGTTGGGTGGGATGAATCCACTGCCGGAGAGAGGAGAAATCGAGTTTCAATCTGGGAAATCGAACCTGTGATAGCCCCATTTTTCATCTGCCCACCTCCGTTCATGAGATCGAAGCGTCCAAGGCAACCTGGAATGCCAGATGAAGAGGCCCACGATATGGATAGCCTGTTTAAAAGGGTGCCTTGGCTTGGAGATGATGGTACTAGCATGAAGGATTCTCAGGCACTTCCTGGCCTAAGCCTGGTTCAATGGATGAATATGCAGCAAAACCCATCTTCAGCCAACTCAATACAAACAAACTACATCCAACCCTTTTCCAATACCCTTTTACAAAACCTGAACGGACCACAAATTCCTCCGACGAATAACTTGCAGTTTAATGCCCAAAAGCTACCTCAGCAACTTCCACAGTTTGATCAACTCACTAAACTCCCATCCGGGATTAGCCCTTTAGGATCAGTTGTCCAGACTCCACAACAGTCGGGCGATGTTTTTCAGCAGCCTATGCAAAATTTGGTCAATCAAAGCCTACCTTCCAGCCAAGTTCCCCTCCAAATACTGCAACCGCAAGCACTGCCTCAGAGCAACTGTAATAATATTCAGCAGCAGCCAGCTTCTCAGAGCCTTCATTTTCAAAGAAATCTTCATCAAAGCCTGCAAATGCAGAATATTATTGGTCAGACTGATCAGCAGAATGCTATTCAATCTCACCTCCTTGATCAAGCAAATCAGCAGCTACCAATATCCGATAATCAGGCTAATCTTCAACTCTTGCAGAGGCAACAACAGTCTCTTCAATCACAGCAGTCTGCACTACAGCAGCAAGCTCAACTTATTCAGCTCCATGATCAGCAGAGACAGCTTTTAGATGTTTCCCAGAGCTTCTCCACTGCCACTCCATCCCTACTACTTCCCCAATCAAACCAATTCAAGACAGCTAACATCACAAATAATCACTTTTCCCTTCCAACCCTTCTGCCAAACGCCCCCCAACAAATGGGGGTGTTGAGTGATACGTCTGGTTGGATGAAAATTTGCCCCACTTCAACGACTAATCATATCTCTGCAGCTTCTTGCAGTATAGCAAATGGAGCTGCCGGATTGGGTCAATCTGTGATTACTGATGAAATTCCATCTTGCTCAACTTCACCTTCGACAAATAACTATGCAGAGGTGGTTCAACCGTTGATTAATGGCCGGATTCGTCATTTTGGACTTGAAGAGGAAATGGCTCAGTCTGCATCCAAAATCTTGAGTCCTAACTCGATTAAAGATTTGCAGCCAAAGCCAGAAGTGAAGTCTTCGATCATTCTTCCTAAAAATCAAGAACAATGCTTGTTTTCCCAGCAAACGTTCTTAAATGGCGCTGCTCCCCAAACAGATTTCTTGGACTCATCATCTTCAACTACTGCAGTCTGCCTTTCGCAGAACGAAGCCCATTTGCAGCAGAATAACTGGATGTCATTCAATTCTCAACCATTGCTGAGAAACACAAGTCAAGAGCTTGAAGTTCCTGTCGATCAGCACCATAATTTCTCATTCGGGTCGAACATGGATGGTCAAGTGGGAGAACAGTTAATAATCGATCCTTTATCGTACAAGGGTGTGACAGGAATCAACAAGGATTTCTCGAATATTCTGTCCTCCAATGGCACGACCACAATATATGAAAATCCAGAAGACCATCAAAAGGAGCTCGCATCTCCTGTAGCTTCTCAGTCATTTGGAGTTCCAGATATGGCATTTAATTCCATCGATTCCACTATAAACGATAGCAGTTTTTTAAGCAGAAGTCAGTGGGCACCTCCTCCACAGATTCAAAGAATGAGGACATTCACCAAGGTCTACAAGCGTGGAGCTGTCGGAAGATCAATTGATATGACGAGATATTCGGGTTATGACGAACTCAAACAAGATCTTGCTCGAAGATTTGGCATCGAAGGCCAATTGGAGGACCGCCAGAGAATCGGATGGAAACTTGTGTATGTAGATCATGAGAAGGACGTTTTACTCGTGGGGGACGATCCTTGGGAGGAGTTTGTGAGCTGTGTGAGGTGCATTAAGATCTTATCCCCTCAAGAAGTACAGCAAATGAGTATGGATGGAGATATTGGAAATGGGGTCCTCCAAAATCAAGCATGCAGCAGCTCTGACTGTAGAAACACTTGA 3063 45.09 MIQRRNKTPLLHCFVAASMKKDADAQIPNYPNLLPKILCLLHNVTLHADPETDEVYAQMTLQPVSSLDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPLLDFSLQPPAQELTARDLHDNVWRFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDERQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANYSPFNVFYNPRASPSEFVIPLAKYYKAVYGNQLSLGMRFRMMFETEDSGTRRYMGTITGICDLDPIRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVIAPFFICPPPFMRSKRPRQPGMPDEEAHDMDSLFKRVPWLGDDGTSMKDSQALPGLSLVQWMNMQQNPSSANSIQTNYIQPFSNTLLQNLNGPQIPPTNNLQFNAQKLPQQLPQFDQLTKLPSGISPLGSVVQTPQQSGDVFQQPMQNLVNQSLPSSQVPLQILQPQALPQSNCNNIQQQPASQSLHFQRNLHQSLQMQNIIGQTDQQNAIQSHLLDQANQQLPISDNQANLQLLQRQQQSLQSQQSALQQQAQLIQLHDQQRQLLDVSQSFSTATPSLLLPQSNQFKTANITNNHFSLPTLLPNAPQQMGVLSDTSGWMKICPTSTTNHISAASCSIANGAAGLGQSVITDEIPSCSTSPSTNNYAEVVQPLINGRIRHFGLEEEMAQSASKILSPNSIKDLQPKPEVKSSIILPKNQEQCLFSQQTFLNGAAPQTDFLDSSSSTTAVCLSQNEAHLQQNNWMSFNSQPLLRNTSQELEVPVDQHHNFSFGSNMDGQVGEQLIIDPLSYKGVTGINKDFSNILSSNGTTTIYENPEDHQKELASPVASQSFGVPDMAFNSIDSTINDSSFLSRSQWAPPPQIQRMRTFTKVYKRGAVGRSIDMTRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEKDVLLVGDDPWEEFVSCVRCIKILSPQEVQQMSMDGDIGNGVLQNQACSSSDCRNT 1020
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8707143 8713095 - Bpe022845.1 Bpe08g00725 107601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00725 1020 Pfam AUX/IAA family 906 993 IPR033389 -
Bpe08g00725 1020 PANTHER AUXIN RESPONSE FACTOR 15 1015 - -
Bpe08g00725 1020 ProSiteProfiles B3 DNA-binding domain profile. 89 191 IPR003340 GO:0003677
Bpe08g00725 1020 SUPERFAMILY DNA-binding pseudobarrel domain 78 218 IPR015300 -
Bpe08g00725 1020 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 1015 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe08g00725 1020 CDD B3_DNA 88 180 IPR003340 GO:0003677
Bpe08g00725 1020 SMART B3_2 89 191 IPR003340 GO:0003677
Bpe08g00725 1020 ProSiteProfiles PB1 domain profile. 908 992 IPR000270 GO:0005515
Bpe08g00725 1020 Pfam B3 DNA binding domain 89 190 IPR003340 GO:0003677
Bpe08g00725 1020 Gene3D - 87 190 IPR015300 -
Bpe08g00725 1020 Coils Coil 546 573 - -
Bpe08g00725 1020 Pfam Auxin response factor 215 298 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bpe08g00725 1020 Gene3D - 253 323 - -
Bpe08g00725 1020 Gene3D - 903 997 - -
Bpe08g00725 1020 SUPERFAMILY CAD & PB1 domains 921 986 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00725 Bpe-Chr8:8707143 Bpe11g01233 Bpe-Chr11:9210760 2.99E-31 dispersed
Bpe08g00725 Bpe-Chr8:8707143 Bpe13g01112 Bpe-Chr13:16729661 7.24E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21765 PF02309 AUX_IAA 3.10E-07 CL0072 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00725 - - qsu:111988787 1323.15