Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00743 ATGCTAGATCTGCAAACTGGGTGCTTCACTTTGAGACAGTTAAGAACTGCCACCAATCATTTTGATTCTGCAAGAAAGCTTGGAGAAGGTGGTTTTGGATTTGTTTACATGAAAAGCTCAAGGCAAGGAAATCGTGAATTTGTGAATGAGATAGGAATGATATCTGGTTTGCGGCATCCAAATCTTGCGAGGCTTTATGGATGTTGTATTGAGGGTAATCAGTTGCTTTTAGTATATGAATACATGGAAAACAATTCCCTTGCCTGTGCTCTTTTTGGTGGAGAAAAAAGTAATCTGAAATTGGATTGGTCAACAAGACAGAAGATTTGTGTTGGGATAGCTAGAGGTTTAGCCTTTCTCCACAAGGAATCCCTTATTAAGGTTGTTCACAGGGATATTAAAGCGACGAATGTTCTACTTGACAAACATCTGAATGCTAAAATATCAGACTTTGGATTAGCTAAGCTCAACGAAGAGTAG 480 38.75 MLDLQTGCFTLRQLRTATNHFDSARKLGEGGFGFVYMKSSRQGNREFVNEIGMISGLRHPNLARLYGCCIEGNQLLLVYEYMENNSLACALFGGEKSNLKLDWSTRQKICVGIARGLAFLHKESLIKVVHRDIKATNVLLDKHLNAKISDFGLAKLNEE 159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9020684 9022009 - Bpe022863.1 Bpe08g00743 107619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00743 159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Bpe08g00743 159 SUPERFAMILY Protein kinase-like (PK-like) 7 157 IPR011009 -
Bpe08g00743 159 Gene3D Transferase(Phosphotransferase) domain 1 83 159 - -
Bpe08g00743 159 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 159 - -
Bpe08g00743 159 ProSiteProfiles Protein kinase domain profile. 21 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00743 159 Gene3D Phosphorylase Kinase; domain 1 39 82 - -
Bpe08g00743 159 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 159 - -
Bpe08g00743 159 Gene3D Phosphorylase Kinase; domain 1 3 38 - -
Bpe08g00743 159 Pfam Protein tyrosine and serine/threonine kinase 39 156 IPR001245 GO:0004672|GO:0006468
Bpe08g00743 159 SMART serkin_6 21 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00743 Bpe-Chr8:9020684 Bpe03g00872 Bpe-Chr3:28467824 1.04E-79 dispersed
Bpe08g00743 Bpe-Chr8:9020684 Bpe08g00744 Bpe-Chr8:9031379 4.35E-92 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63465 PF07714 PK_Tyr_Ser-Thr 8.30E-27 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00743 - - pop:18103163 251.906