Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00765 CTCATGGAAGTGGTATGTGAAAGCAGTAAAGATGAAGCAGGAATCAAGCTGTTTGGGAAGACGATCATATTACGAAGTATAAAAGAAAACGAGGAGGAAATGAAAGCTGATCGGAAGACGGAGGAGAAGAGGCCGGAAAAGATAATACCATGCCCGAGATGCAAGAGCATGGAGACCAAGTTTTGTTACTTCAACAACTACAACGTTAACCAACCCAGACATTTTTGCAAAGGTTGTCAGAGGTACTGGACCGCCGGAGGCGCCCTCCGCAACGTCCCAGTCGGGGCCGGACGCCGGAAGAACAAGCCAGCTTGTGGAGGCCTCAACCAGTTTCCAGAGAATTATCTCTATGGTCTGCCTGACTGGGCTTATACCACGGGAGATGAAGATTTCCGGCGAGACTTTGTAACGAAGCGTCGCCAGGCGAGTCAAGGCCATTATTATTGA 447 49.22 LMEVVCESSKDEAGIKLFGKTIILRSIKENEEEMKADRKTEEKRPEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKNKPACGGLNQFPENYLYGLPDWAYTTGDEDFRRDFVTKRRQASQGHYY 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9430318 9430764 + Bpe022885.1 Bpe08g00765 107641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00765 148 Coils Coil 24 44 - -
Bpe08g00765 148 PANTHER CYCLIC DOF FACTOR 2 6 117 IPR045174 GO:0003700|GO:0006355
Bpe08g00765 148 Pfam Dof domain, zinc finger 47 102 IPR003851 GO:0003677|GO:0006355
Bpe08g00765 148 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Bpe08g00765 148 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Bpe08g00765 148 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 6 117 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01453 Bpe-Chr2:17881393 Bpe08g00765 Bpe-Chr8:9430318 5.45E-36 dispersed
Bpe08g00765 Bpe-Chr8:9430318 Bpe11g01139 Bpe-Chr11:8475428 1.84E-53 dispersed
Bpe08g00765 Bpe-Chr8:9430318 Bpe08g00766 Bpe-Chr8:9450191 3.17E-85 tandem
Bpe01g00871 Bpe-Chr1:18699815 Bpe08g00765 Bpe-Chr8:9430318 2.71E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21767 PF02701 zf-Dof 3.00E-32 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00765 - - pper:18778392 179.874