Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00765 | CTCATGGAAGTGGTATGTGAAAGCAGTAAAGATGAAGCAGGAATCAAGCTGTTTGGGAAGACGATCATATTACGAAGTATAAAAGAAAACGAGGAGGAAATGAAAGCTGATCGGAAGACGGAGGAGAAGAGGCCGGAAAAGATAATACCATGCCCGAGATGCAAGAGCATGGAGACCAAGTTTTGTTACTTCAACAACTACAACGTTAACCAACCCAGACATTTTTGCAAAGGTTGTCAGAGGTACTGGACCGCCGGAGGCGCCCTCCGCAACGTCCCAGTCGGGGCCGGACGCCGGAAGAACAAGCCAGCTTGTGGAGGCCTCAACCAGTTTCCAGAGAATTATCTCTATGGTCTGCCTGACTGGGCTTATACCACGGGAGATGAAGATTTCCGGCGAGACTTTGTAACGAAGCGTCGCCAGGCGAGTCAAGGCCATTATTATTGA | 447 | 49.22 | LMEVVCESSKDEAGIKLFGKTIILRSIKENEEEMKADRKTEEKRPEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKNKPACGGLNQFPENYLYGLPDWAYTTGDEDFRRDFVTKRRQASQGHYY | 148 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9430318 | 9430764 | + | Bpe022885.1 | Bpe08g00765 | 107641 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00765 | 148 | Coils | Coil | 24 | 44 | - | - | |
Bpe08g00765 | 148 | PANTHER | CYCLIC DOF FACTOR 2 | 6 | 117 | IPR045174 | GO:0003700|GO:0006355 | |
Bpe08g00765 | 148 | Pfam | Dof domain, zinc finger | 47 | 102 | IPR003851 | GO:0003677|GO:0006355 | |
Bpe08g00765 | 148 | ProSiteProfiles | Zinc finger Dof-type profile. | 49 | 103 | IPR003851 | GO:0003677|GO:0006355 | |
Bpe08g00765 | 148 | ProSitePatterns | Zinc finger Dof-type signature. | 51 | 87 | IPR003851 | GO:0003677|GO:0006355 | |
Bpe08g00765 | 148 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.5-LIKE | 6 | 117 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01453 | Bpe-Chr2:17881393 | Bpe08g00765 | Bpe-Chr8:9430318 | 5.45E-36 | dispersed | |
Bpe08g00765 | Bpe-Chr8:9430318 | Bpe11g01139 | Bpe-Chr11:8475428 | 1.84E-53 | dispersed | |
Bpe08g00765 | Bpe-Chr8:9430318 | Bpe08g00766 | Bpe-Chr8:9450191 | 3.17E-85 | tandem | |
Bpe01g00871 | Bpe-Chr1:18699815 | Bpe08g00765 | Bpe-Chr8:9430318 | 2.71E-67 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21767 | PF02701 | zf-Dof | 3.00E-32 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00765 | - | - | pper:18778392 | 179.874 |