Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00796 | ATGTTCTTGCTCTCTCTCATTTCGTCTCCTACTGACATACTATTTCGATTTAGCTTTCGTCTCGGTGGCCGTTCAGGGGAAGCCTATTACGATGCTGAGATTGAAGCTATGAAGGCCTCTGAATCCACCACCATGTTCATCGATTTCTCTCATCTCATCCGCTTCAATGATCTCCTTCACTTTGCTATCTCTGAAGAATACTTGAGGTTTGAACGCTACTTGAAGAATGCTTGCAAGCGGTTCGTGATGGAAAAGAAGCCCACCTTCATTGCTGATGACAACCTTGGCAAGGACATCAATGTTGCTTTTTTTAACATCCCCGTTTGTAAGAGGTTGAGGGAGTTGACTACAGCAGAAATTGGCAAATTAGTATCAGTGACAGGAGTTGTAACTCGTACAAGTGAGGTTCGACCAGAACTTCTCCAAGGGACCTTTAAGTGCCTTATATGTGGAGGTGTGATAAAGAACATTGAACAGCAATTCAAGTATACAGAGCCAACAATTTGCATGAGTCCTACATGTGCAAATAGAACGAAATGGGCATTACTGCGGCAAGAGAGCAAATTTTCTGATTGGCAAAGGGTGCGAATGCAAGAGACTTCCAAGGAGATACCAGCAGGATCTCTTCCTCGATCGTTAGATGTAATTCTTCGTCATGAGATGGTCGAGCGAGCCAGGGCCGGAGACACGGTTGTTTTTACGGGTACAGTGGTTGTGATACCAGACATACTTGCATTGGGCTCTCCTGGTGAAAGAGCAGAAACTCGACGAGAAGGTTCCCAACAGCAAAGTTCTACTGTTGGACATGAAGGAGTGAGAGGCCTTAAAGCTCTAGGAGTGAGAGACCTGTCATATCGATTAGCTTTTATCGCCAATTCAGTTCAAATTGCTGAAGGTAGGAGAGACACGGATGTCAGGAATAGGAAAAGGGAAAGTGATGAAGAACACCAGCAATTTACAGCGGAAGAGCTTGACGAAGTCCAAAGAATGAGGAATACACCAGATTTCTTAAATAAACTTGTTGAGAGTATTGCACCAACAGTCTTTGGTCACCAAGATATCAAGCGAGCTATCTTGCTTATGCTCCTAGGTGGAGTTCACAAGTATACTCATGAAGGCATCAATCTGAGAGGAGATATTAATGTTTGCATTGTAGGAGATCCAAGCTGTGCAAAATCTCAATTCCTGAAGTACACTGCAGGTATAGTTCCAAGATCTGTTTATACGTCTGGGAAATCCTCTTCAGCAGCAGGTTTGACTGCAACTGTGGCAAAAGAACCTGAAACTGGGGAATTTTGTATTGAGGCAAGAATTACTTGTAACTATTTTGCTGCCGGTGCTTTAATGCTTGCTGACAACGGGATTTGTTGCATTGATGAATTTGATAAAATGGATATTAGGGATCAGGTTGCAATTCATGAAGCGATGGAACAGCAAACTATAAGCATTACCAAAGCTGGAATACAAGCAACACTGAATGCTCGTACATCAATTCTGGCTGCTGCTAATCCTGCAGGCGGACGTTACGACAAGTCTAAGCCATTGAAGTATAATGTGGCTCTTCCTCCTGCCATTCTCTCAAGGTTTGACCTGGTATACGTTATGATTGATGATCCAGATGATCAAACAGATTACCACATTGCCCACCACATTGTCAGAGTACATCAGAAGCGTGAAAATGCTCTTTCTCCGGCATTTTCTACTGCAGAGCTGAAGAGATATATTGCATATGCAAAAACTTTAAAACCCAAGCTAAGCTCAGATGCGAGGAAATTGTTGGTCGACTCTTATGTTGCTTTACGTAGAGGAGATACCACTCCTGGCAGTAGAGTTGCGTATCGCATGACTGTTAGACAACTTGAGGCATTGATCAGACTATCTGAAGCCATTGCTCGAAGTTATTTGGAAACTCTGGTGCATACATGTTTTGACAAATTTCATTCACTAGTATTTGATATCTCATTATTTATGGAATATACTCAGAAAGACATGCACGCAGGTACAACCACATCACGTTCTGTGGAGTCGAGTGAGATTGATCTGTCAGAGTTTCAAGAAGAAAAAAATGTTGGTGACAATAATGGAGATAGGGTGGATGGTGATGCTAACCAAGATGATTCTCAACCAAGCAATGATCCAGTTTCAGGAAACGAAATTGGTTCTGCAGCTGCAAATCGAGAAGGAAGAAAACTTGTTCTAACGGATGAATATTTTCAGCGGATCACCCAAGCTCTCATTATGCACCTTAGGGAGCATGAAGAAACTGTAATGCAAGAAGGAACTGGGCTGGCGGGAATGAGACAGAGGGACTTGATTAAATGGTATGTGGATCAGCAGAATGCAAAAAATAAATATAGCACCGAGGTGGAGGTTATAAACGAAGTGTCTAACATTAAAGCTATTATAGAGAGTTTAATACGAAGGCAAGGGCATTTGATAGTGGTGGACGATGGCAGGCCAGTTACAGAGGGTGAAGTTGCTGGACAATCATCAAGTAGAAATGACAGAATTTTGGCTGTTGCTCCCAATTATGTCATTCATTGA | 2544 | 42.49 | MFLLSLISSPTDILFRFSFRLGGRSGEAYYDAEIEAMKASESTTMFIDFSHLIRFNDLLHFAISEEYLRFERYLKNACKRFVMEKKPTFIADDNLGKDINVAFFNIPVCKRLRELTTAEIGKLVSVTGVVTRTSEVRPELLQGTFKCLICGGVIKNIEQQFKYTEPTICMSPTCANRTKWALLRQESKFSDWQRVRMQETSKEIPAGSLPRSLDVILRHEMVERARAGDTVVFTGTVVVIPDILALGSPGERAETRREGSQQQSSTVGHEGVRGLKALGVRDLSYRLAFIANSVQIAEGRRDTDVRNRKRESDEEHQQFTAEELDEVQRMRNTPDFLNKLVESIAPTVFGHQDIKRAILLMLLGGVHKYTHEGINLRGDINVCIVGDPSCAKSQFLKYTAGIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEARITCNYFAAGALMLADNGICCIDEFDKMDIRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVALPPAILSRFDLVYVMIDDPDDQTDYHIAHHIVRVHQKRENALSPAFSTAELKRYIAYAKTLKPKLSSDARKLLVDSYVALRRGDTTPGSRVAYRMTVRQLEALIRLSEAIARSYLETLVHTCFDKFHSLVFDISLFMEYTQKDMHAGTTTSRSVESSEIDLSEFQEEKNVGDNNGDRVDGDANQDDSQPSNDPVSGNEIGSAAANREGRKLVLTDEYFQRITQALIMHLREHEETVMQEGTGLAGMRQRDLIKWYVDQQNAKNKYSTEVEVINEVSNIKAIIESLIRRQGHLIVVDDGRPVTEGEVAGQSSSRNDRILAVAPNYVIH | 847 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9861506 | 9867931 | + | Bpe022916.1 | Bpe08g00796 | 107672 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00796 | 847 | ProSiteProfiles | MCM family domain profile. | 336 | 551 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe08g00796 | 847 | MobiDBLite | consensus disorder prediction | 704 | 718 | - | - | |
Bpe08g00796 | 847 | CDD | MCM6 | 339 | 639 | - | - | |
Bpe08g00796 | 847 | Gene3D | - | 314 | 642 | IPR027417 | - | |
Bpe08g00796 | 847 | MobiDBLite | consensus disorder prediction | 666 | 721 | - | - | |
Bpe08g00796 | 847 | Gene3D | - | 139 | 190 | - | - | |
Bpe08g00796 | 847 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM6 | 35 | 799 | - | - | |
Bpe08g00796 | 847 | Pfam | MCM AAA-lid domain | 570 | 640 | IPR041562 | - | |
Bpe08g00796 | 847 | Pfam | MCM P-loop domain | 324 | 555 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe08g00796 | 847 | MobiDBLite | consensus disorder prediction | 249 | 269 | - | - | |
Bpe08g00796 | 847 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 346 | 632 | IPR027417 | - | |
Bpe08g00796 | 847 | Pfam | MCM N-terminal domain | 24 | 105 | IPR027925 | - | |
Bpe08g00796 | 847 | Gene3D | - | 112 | 240 | IPR012340 | - | |
Bpe08g00796 | 847 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 446 | 460 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe08g00796 | 847 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 525 | 533 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe08g00796 | 847 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 474 | 487 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe08g00796 | 847 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 498 | 510 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe08g00796 | 847 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 377 | 392 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe08g00796 | 847 | SUPERFAMILY | Nucleic acid-binding proteins | 25 | 242 | IPR012340 | - | |
Bpe08g00796 | 847 | SMART | mcm | 108 | 656 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe08g00796 | 847 | Pfam | MCM6 C-terminal winged-helix domain | 730 | 846 | IPR041024 | - | |
Bpe08g00796 | 847 | Pfam | MCM OB domain | 112 | 240 | IPR033762 | - | |
Bpe08g00796 | 847 | Gene3D | - | 11 | 108 | - | - | |
Bpe08g00796 | 847 | Gene3D | - | 727 | 847 | - | - | |
Bpe08g00796 | 847 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 109 | 121 | IPR008049 | GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Bpe08g00796 | 847 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 271 | 292 | IPR008049 | GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Bpe08g00796 | 847 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 159 | 176 | IPR008049 | GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Bpe08g00796 | 847 | PRINTS | Mini-chromosome maintenance (MCM) protein 6 signature | 212 | 223 | IPR008049 | GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555 | |
Bpe08g00796 | 847 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 35 | 799 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Bpe08g00796 | 847 | ProSitePatterns | MCM family signature. | 454 | 462 | IPR018525 | GO:0003677|GO:0005524|GO:0006260 | |
Bpe08g00796 | 847 | MobiDBLite | consensus disorder prediction | 679 | 703 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01592 | Bpe-Chr4:22166731 | Bpe08g00796 | Bpe-Chr8:9861506 | 1.01E-78 | dispersed | |
Bpe08g00796 | Bpe-Chr8:9861506 | Bpe10g00498 | Bpe-Chr10:12199940 | 2.54E-110 | dispersed | |
Bpe08g00796 | Bpe-Chr8:9861506 | Bpe15g00852 | Bpe-Chr15:18514200 | 8.77E-105 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00796 | K02542 | - | jre:108993888 | 1274.23 |