Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00808 ATGTTTGGAGATTGTCAAGTGATGTCAAGCATGGGAGGAAGTGTAGTTTCCACCGAAAACTTCTTCTCCTCTCCCATCCAAAACCCTAATTTCAACTTCCTGTCTTCCATGCCGTTTCAACATTTCCCTCCCACCACCCTTCCTAAGGAAGAAAGTGGGTTGTTGAGATCAGGAAAAGAGGAAATGGAGAGTGGGTCTGGAAGTGAACAGGTTGAAGATAGATCGGGAAATGAGCAGGAAAGTGAGCCGCAACCTCCTAAGAAAAAACGCTACCATCGCCACACAGCTCGTCAGATCCAAGAAATGGAATCTTTATTTAAGGAATGTCCACACCCAGATGACAAGCAGAGGCTAAAACTAAGCCATGATCTTGGCCTAAAACCTCGTCAAGTAAAGTTCTGGTTCCAAAACCGAAGAACCCAGATGAAGGCACAGCAAGATCGATCTGACAATGTAATTCTTAGAGCCGAAAATGACACATTAAAGAACGAGAACTATAGGCTTCAATCTGCTCTCCGTAATATCATCTGCCCCAATTGTGGAGGTCAAGGTCTGTTGGGGGAGCCTAGCTTGGATGAACAGCAACTTCGCCATGAAAATGCTCGTCTTAGAGAAGAGATAGAACGATTTTGCTGTTTAACTTCGCGATACACCACTGGACGGACTCTTCCGGCAATGGCACCGGCTGCACAACTAGTATCGCCATCCTTGGATTTAGACATGAGTATATATTCGAGGCAATTTCAAGATCAGCCAATGGTTTCTTCAGCTGATTTAATTCAAGTGCCAATGCTTCCTGCTGAAACCACCCAGTTTCCGGAGGGAGGTCTTCATTTAGAAGAGGAGAAGTCAATGGCCATGGAGCTTGCTTTGTCCTCCACGAACGACCTGGTGAAGATGTGCCAAACAGCTAAACCCCTTTGGATCCGAGACAGTGAAAGTGGAAGAGAAGTTTTGAATTTTGAAGAACATTCGAGAATGTTTCCATGGTCGTTGAATCTTAAACACCATTCGGATGAGTTTAGAACAGAAGCCACTCGTGATAGTGCTGTTGTTATAATGAACAGCATCACTCTAGTTGATGCATTCGTTGATGCTAATAAGTGGATGGAGCTGTTTCCATCGATTGTGGCAAGAGCCAAAACCGTTCAAGTGATATCGTCGAGTTCTTCTGGTCACGCAAGTGGCTCACTTCAACTGATGTATGCAGAATTTCAAATTCTTTCGCCACTCGTGCCGACTCGAGAAGCGAATTTTCTTCGTTATTGCCATCAAAATGTAGCGGAGGGAAGTTGGGTGATCGTTGATTTTCCAGTCGATAGTTTTCATGACAATGTCCAGACTTCTCTTCCTAGGTATCGGAGACGACCCTCTGGCTGTATTATCCAAGATATGCCTAATGGCTACTCTAGGGTGACATGGGTGGAACATGCGGAAATAGAGGAGAAGCCAATTCATCAGATATTCAACCAGTTTGTAAGCAGTGGGATGGCCTTTGGAGCACAACGCTGGTTAGCCGTCTTACAGAGACAATGCGAGAGAATTGCCAGTCTCATGGCTAGAAATATTTCAGATCTTGGAGTGATACCATCTCCGGAGGCAAGGAAGAACTTGATGAAGCTGGCGCAGAGAATGATAAGAACATTCAGTGTGAACATCAGCAGCTCCAATGGCCAATCATGGACTGCTCTATCTGACTCTCCTGATGACACAGTTCGAATCACCACCCGCAAAATCATCGAACCAGGCCAGCCTACTGGTCTTATCCTCAGCGCCGTCTCCACCACTTGGCTTCCGTTCCCCCATTACAGGGTTTTCGACCTCCTGAAAGACGAACAGCGTCGTTCTCAGTTGGAGGTTCTGTCTAATGGGAATCCTTTGCATGAGGTTGCTCACATTGCCAATGGCTCCCATCCTGGAAACTCCATCTCTCTTCTTCGCATCAATGTGGCGAGCAACTCATCGCAGCATGTGGAGCTGATGCTGCAAGAGAGCTGCACCGATCAGTCGGGCAGCATCATCGTCTATACCAACATTGACGTCGATTCCATTCAACTGGCCATGAGCGGCGAAGATCCTTCCTGCATTCCCCTTCTCCCTCTCGGCTTCGTCGTCGTCCCTATCACCTCCGCCGCCGGAAACCCCTCAGACCCACCTTCTGGAGATCCAGCCGGAGCATCACCACCCTCCATCCCCGGCTGTCTACTCACTGTGGGCCTCCAGGTATTAGCCAGCACCATCCCCTCTGCCAAGCTCAGCCTCTCCAGTGTCACCGCTATTAACAACCACCTCTGCAATACGGTTCACCAAATCACCGTCGCTCTCACCTCCTCCCCCAACCGCTCTGACCCGCTCTCTGGGCCATCCAAGTGA 2373 48.21 MFGDCQVMSSMGGSVVSTENFFSSPIQNPNFNFLSSMPFQHFPPTTLPKEESGLLRSGKEEMESGSGSEQVEDRSGNEQESEPQPPKKKRYHRHTARQIQEMESLFKECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENDTLKNENYRLQSALRNIICPNCGGQGLLGEPSLDEQQLRHENARLREEIERFCCLTSRYTTGRTLPAMAPAAQLVSPSLDLDMSIYSRQFQDQPMVSSADLIQVPMLPAETTQFPEGGLHLEEEKSMAMELALSSTNDLVKMCQTAKPLWIRDSESGREVLNFEEHSRMFPWSLNLKHHSDEFRTEATRDSAVVIMNSITLVDAFVDANKWMELFPSIVARAKTVQVISSSSSGHASGSLQLMYAEFQILSPLVPTREANFLRYCHQNVAEGSWVIVDFPVDSFHDNVQTSLPRYRRRPSGCIIQDMPNGYSRVTWVEHAEIEEKPIHQIFNQFVSSGMAFGAQRWLAVLQRQCERIASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSVNISSSNGQSWTALSDSPDDTVRITTRKIIEPGQPTGLILSAVSTTWLPFPHYRVFDLLKDEQRRSQLEVLSNGNPLHEVAHIANGSHPGNSISLLRINVASNSSQHVELMLQESCTDQSGSIIVYTNIDVDSIQLAMSGEDPSCIPLLPLGFVVVPITSAAGNPSDPPSGDPAGASPPSIPGCLLTVGLQVLASTIPSAKLSLSSVTAINNHLCNTVHQITVALTSSPNRSDPLSGPSK 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10112023 10116430 - Bpe022929.1 Bpe08g00808 107684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00808 790 SUPERFAMILY Bet v1-like 532 770 - -
Bpe08g00808 790 MobiDBLite consensus disorder prediction 53 87 - -
Bpe08g00808 790 MobiDBLite consensus disorder prediction 42 96 - -
Bpe08g00808 790 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Bpe08g00808 790 SUPERFAMILY Bet v1-like 280 516 - -
Bpe08g00808 790 SMART HOX_1 86 149 IPR001356 GO:0003677
Bpe08g00808 790 SMART START_1 288 514 IPR002913 GO:0008289
Bpe08g00808 790 Pfam START domain 289 514 IPR002913 GO:0008289
Bpe08g00808 790 ProSiteProfiles START domain profile. 279 517 IPR002913 GO:0008289
Bpe08g00808 790 SUPERFAMILY Homeodomain-like 73 146 IPR009057 -
Bpe08g00808 790 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Bpe08g00808 790 Gene3D - 330 513 IPR023393 -
Bpe08g00808 790 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 52 781 IPR042160 -
Bpe08g00808 790 Pfam Homeodomain 88 143 IPR001356 GO:0003677
Bpe08g00808 790 CDD homeodomain 88 146 IPR001356 GO:0003677
Bpe08g00808 790 Gene3D - 72 156 - -
Bpe08g00808 790 PANTHER - 52 781 - -
Bpe08g00808 790 CDD START_ArGLABRA2_like 283 513 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00808 Bpe-Chr8:10112023 Bpe14g00999 Bpe-Chr14:7375836 0 dispersed
Bpe08g00808 Bpe-Chr8:10112023 Bpe12g00639 Bpe-Chr12:12017415 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21772 PF01852 START 3.90E-45 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00808 - - csv:101212772 1189.87