Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00819 ATGTATGGACAGAGCTACGGGGCCGAATCGGATTTCGGTTTATTTGAAGCTGTTCGTCGGCATTTAATTGACGAGCCAGAGGCTCGGCGAGGCTGTGAATTGGGGGTTACCCCGGTTTTCTGCCGGAGCTCCAGTTTTGGAAGCGTGTACCCGTGTTTGACTGAGAGTTGGGGCATGTTGCCGTTGAAGGAAAACGATTCGGAGGATATGGTGCTCGCCGGAGTACTCCGAGATGCTGTCAGTTTCGGGTGGGTTCCGTCGCTCAATTCTGCATCAATGGCGAGTGGCGTTTTTGAAACTTCGCGGGTAAAACCCGACGTGGAACTGGAGAGTCTTTCACTGGATTTTGGGGAAGATCGGTCGCCAGAGCCGCCTGCCGCTCCGTCCAAGGGGAAGCATTACAGAGGAGTTCGCCAACGTCCTTGGGGAAAATTTGCGGCGGAGATTCGTGATCCGGCAAAAAATGGCGCCAGAGTCTGGCTCGGGACGTTCGAGACGGCGGATGATGCGGCCCTGGCGTATGACAGAGCAGCCTACAAGATGCGCGGCTCGAAAGCGCTTCTGAACTTTCCGCTTCGAGTCAATTCAGGGGAGCCCGACCCGGTTAGAGTGACCTCAAAACGGTCCTCATCGGGCCGATCCCCATCATCCCCCAAAGGGTCGCCGAAACGCCGGAAGACGACCGACAACACAGCAGCTCAGCCAATTTTGGCGACTCTACCGCCGTTAGAAGAAGGAAAAGAAATGGAGGTGGTATTACGAACCAGTCTTGTCGAGTTCTCGTCGCTCGTCTAA 795 55.47 MYGQSYGAESDFGLFEAVRRHLIDEPEARRGCELGVTPVFCRSSSFGSVYPCLTESWGMLPLKENDSEDMVLAGVLRDAVSFGWVPSLNSASMASGVFETSRVKPDVELESLSLDFGEDRSPEPPAAPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETADDAALAYDRAAYKMRGSKALLNFPLRVNSGEPDPVRVTSKRSSSGRSPSSPKGSPKRRKTTDNTAAQPILATLPPLEEGKEMEVVLRTSLVEFSSLV 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10295982 10296776 - Bpe022942.1 Bpe08g00819 107695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00819 264 CDD AP2 132 191 IPR001471 GO:0003700|GO:0006355
Bpe08g00819 264 SUPERFAMILY DNA-binding domain 133 193 IPR016177 GO:0003677
Bpe08g00819 264 MobiDBLite consensus disorder prediction 194 240 - -
Bpe08g00819 264 SMART rav1_2 133 197 IPR001471 GO:0003700|GO:0006355
Bpe08g00819 264 MobiDBLite consensus disorder prediction 116 137 - -
Bpe08g00819 264 PRINTS Ethylene responsive element binding protein signature 157 173 IPR001471 GO:0003700|GO:0006355
Bpe08g00819 264 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Bpe08g00819 264 Pfam AP2 domain 133 183 IPR001471 GO:0003700|GO:0006355
Bpe08g00819 264 PANTHER DNA-BINDING DOMAIN 24 229 IPR044808 GO:0003700|GO:0009873
Bpe08g00819 264 MobiDBLite consensus disorder prediction 202 218 - -
Bpe08g00819 264 Gene3D AP2/ERF domain 132 194 IPR036955 GO:0003700|GO:0006355
Bpe08g00819 264 ProSiteProfiles AP2/ERF domain profile. 133 191 IPR001471 GO:0003700|GO:0006355
Bpe08g00819 264 PANTHER BNAANNG21280D PROTEIN 24 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01040 Bpe-Chr4:7531396 Bpe08g00819 Bpe-Chr8:10295982 1.43E-32 dispersed
Bpe05g01069 Bpe-Chr5:23190849 Bpe08g00819 Bpe-Chr8:10295982 3.28E-30 dispersed
Bpe06g00427 Bpe-Chr6:15659310 Bpe08g00819 Bpe-Chr8:10295982 2.06E-27 dispersed
Bpe07g00998 Bpe-Chr7:15666047 Bpe08g00819 Bpe-Chr8:10295982 1.11E-30 dispersed
Bpe08g00819 Bpe-Chr8:10295982 Bpe14g00816 Bpe-Chr14:6177253 1.95E-28 dispersed
Bpe11g01312 Bpe-Chr11:9821697 Bpe08g00819 Bpe-Chr8:10295982 8.77E-34 dispersed
Bpe14g01246 Bpe-Chr14:9398041 Bpe08g00819 Bpe-Chr8:10295982 6.36E-26 dispersed
Bpe08g00819 Bpe-Chr8:10295982 Bpe05g00559 Bpe-Chr5:19748914 6.82E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21773 PF00847 AP2 4.10E-14 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00819 K09286 - csv:101203663 280.411