Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00833 ATGACGGACTATCGATTAGCTTCGACGGCTATGAATCTTTGGAGTGACGAGAATGCTTCGGTCATGGATGCTTTCCTGAATTCTGATCTTTCTTCTTTCTGGGCTCCGCCTCCTCAAAACCACCCTTCCTCCGCCTCCACCTCTGCTCCTCTCCCGCAGCCGTCAGCTGCGGTTTTCAACCAGGAAAGTTTGCAGCAGCGTCTGCAGGCGCTGATCGAGGGGCCTCGCCATGTCTGGACTTACGCAATCTTCTGGCAGTCCTCTTACGATTACTCCGGCCCATCGGTTTTAGGATGGGGCGATGGGTATTACAAAGGGGAGGAAGATAGAGGCACGGCCAAAAGCATTTCAGCTTCTTCTGCGGCAGAGCAGGAGCACCGGAAAAAGGTTCTCCGCGATCTCAACTCACTGATTTCAGGATCCACCTTCCCTTCAGACGACGCCGTCGATGAAGTTGTCACCGACACCGAGTGGTTCTTCTTGGTTTCGATGACCCAGTCTTTTGTCAACGGCAGTGGGTTGCCCGGTCAGGCCTTGTTCAATTCCCGGCCGGTGTGGATTTCTGGGTCGGACCGACTCGCGGCATCTACCTGCGAACGCGCTCGGCAAGGTCAGGCCTTCGGGTTACAGACGATGATATGTATACCCTCTGCAAATGGAGTAGTTGAATTAGGGTCGACGGAGGTCGTCTTACAGAGCTCCGATCTGATGAATAAAGTTAGGGTTTTGTTCGATTTCAATAATCTGGAGGTTGGTTCATGGCCCATGGCCGGAGCTGACCATGCCGAAACAGACCCATCTGCACTCTGGCTAACCGACCCTTCTGAAATCAAAGAACCAGCGACCTCTATTCCACTTTCAATGGCCCCTTCTTCAACTTCCCATCCAGCTTCTAAGCCAATCCACTTCGATAATCCAAGGCCGACGAGTTTAACGGACATTCCAGCCAATCAGCAGTCAACACAGATGCAGACGCAAACCTTCTTCTCCCGAGAACTGAATTTCTCCAACTACGGATGCGAAGTAACCAGCGCAAATAACGGAAATTCCCAACCGATGAAGCCAGAATCTGGGGAGATTCTCAACTTTGGAGAGAGTAAAAAAGGTTCTTACGGGAACGGCAGCTTGTTTTCCGGCCATTCTCAGGTTGTTACCGAGGAGCCCGTAAACAAGAAGAGGTCGCCGGCTTCCCGAGGAAGTAACGAAGATGGGATGATGTCTTTTACTTCCGGCGTGATTCTGCCGTCTTCCGGTGGAGTAAAGTCAAGCGGCGGTGGAGTGGATTCCGACCATTCCGATCTCGAAGCTTCAGTAGTTCGTGAGGCAGACAGTGGCAGAGTGGTGGAACCGGAGAAGAAGCCTCGGAAAAGAGGAAGAAAACCAGCAAACGGAAGAGAAGAGCCATTAAATCACGTTGAAGCAGAGAGACAGAGAAGAGAGAAGCTAAACCAGAGATTCTACGCTCTCAGAGCTGTAGTTCCAAACGTGTCGAAAATGGACAAAGCTTCCCTTCTCGGCGACGCCATCTCCTACATCAACGAGCTCAAAACCAAGCTCCAAACTACAGAATCAGATAATGAAGAGTTGCAGACACAACTAGATTCAGTGAAAAAGGAGTTGGACAACAAAGACAGTCGTCATTCAGGATCAAAACAATCTCCGCGTAATCAAGATCTGAAGATCTCAAATCAAAACGGAGATAAACTCACAGAAAAGGACATCGATGTTAAAATTATCGGCCGGGATGCTATGATTCGAATCCAATGCAGCAAGGAAAACCACCCAGCAGCTGCAATAATGGCGGCACTGAAGGAACTAGACTTGGAAGTTAACCACGCCAGCATGTCAGTGGTGAATAACCTGATGATCCAACAAGCTACAGTGAAGATGGGGAGTAGATTTTACACTCAAGAACAGCTCAAGATCGCTCTGTCAACAAAATTAAGCAACACCCGGTGA 1959 49.82 MTDYRLASTAMNLWSDENASVMDAFLNSDLSSFWAPPPQNHPSSASTSAPLPQPSAAVFNQESLQQRLQALIEGPRHVWTYAIFWQSSYDYSGPSVLGWGDGYYKGEEDRGTAKSISASSAAEQEHRKKVLRDLNSLISGSTFPSDDAVDEVVTDTEWFFLVSMTQSFVNGSGLPGQALFNSRPVWISGSDRLAASTCERARQGQAFGLQTMICIPSANGVVELGSTEVVLQSSDLMNKVRVLFDFNNLEVGSWPMAGADHAETDPSALWLTDPSEIKEPATSIPLSMAPSSTSHPASKPIHFDNPRPTSLTDIPANQQSTQMQTQTFFSRELNFSNYGCEVTSANNGNSQPMKPESGEILNFGESKKGSYGNGSLFSGHSQVVTEEPVNKKRSPASRGSNEDGMMSFTSGVILPSSGGVKSSGGGVDSDHSDLEASVVREADSGRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKTKLQTTESDNEELQTQLDSVKKELDNKDSRHSGSKQSPRNQDLKISNQNGDKLTEKDIDVKIIGRDAMIRIQCSKENHPAAAIMAALKELDLEVNHASMSVVNNLMIQQATVKMGSRFYTQEQLKIALSTKLSNTR 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10483940 10485898 + Bpe022955.1 Bpe08g00833 107709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00833 652 Gene3D - 458 545 IPR036638 GO:0046983
Bpe08g00833 652 MobiDBLite consensus disorder prediction 368 385 - -
Bpe08g00833 652 MobiDBLite consensus disorder prediction 400 417 - -
Bpe08g00833 652 SMART finulus 472 521 IPR011598 GO:0046983
Bpe08g00833 652 PANTHER TRANSCRIPTION FACTOR MYC2 41 649 - -
Bpe08g00833 652 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 469 535 IPR036638 GO:0046983
Bpe08g00833 652 MobiDBLite consensus disorder prediction 537 553 - -
Bpe08g00833 652 Pfam Helix-loop-helix DNA-binding domain 470 515 IPR011598 GO:0046983
Bpe08g00833 652 CDD bHLH_AtAIB_like 463 539 - -
Bpe08g00833 652 MobiDBLite consensus disorder prediction 433 476 - -
Bpe08g00833 652 PANTHER MYC 41 649 IPR045084 GO:0003700|GO:0006355
Bpe08g00833 652 Coils Coil 512 546 - -
Bpe08g00833 652 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 466 515 IPR011598 GO:0046983
Bpe08g00833 652 MobiDBLite consensus disorder prediction 537 566 - -
Bpe08g00833 652 MobiDBLite consensus disorder prediction 365 476 - -
Bpe08g00833 652 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 64 244 IPR025610 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g00833 Bpe11g00336 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00962 Bpe-Chr4:6548845 Bpe08g00833 Bpe-Chr8:10483940 2.85E-32 dispersed
Bpe07g00211 Bpe-Chr7:1471440 Bpe08g00833 Bpe-Chr8:10483940 0 dispersed
Bpe08g00833 Bpe-Chr8:10483940 Bpe08g00900 Bpe-Chr8:11410234 3.85E-39 dispersed
Bpe11g00211 Bpe-Chr11:1437072 Bpe08g00833 Bpe-Chr8:10483940 3.41E-14 dispersed
Bpe13g00149 Bpe-Chr13:9200025 Bpe08g00833 Bpe-Chr8:10483940 1.55E-16 dispersed
Bpe11g00336 Bpe-Chr11:2441302 Bpe08g00833 Bpe-Chr8:10483940 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21776 PF14215 bHLH-MYC_N 1.80E-54 CL0161 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00833 K13422 - vvi:100250607 866.685