Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00843 ATGGATCTACGGGAAGTTCAGCCACCGCTGCTTTCGCCAGCATCAAATATGATGATGGGAGTTGGACCTACCCATTACCCGACTTCCATGCCTAACTCAAACAATTCTATGATCGGCCCCAATTCTGCTGCAGCTCATATGATGTCGCCTACGTCCCGATTACCCTTCAACTCTGTGGTCACTCCCGTGTCGAAGCCTTTAGACTCACAAAATTCTAACGTTTATGATGGATCGTCCACTGGATTGCGTACTGGTGGATTTAACATTGAGACGGAGAAGAAGAAGAGAGGACGACCAAGGAAGTACTCGCCGGACGGTAATATCGCTTTGGGATTAGCGCCTACTCCGGTGGGTCAGACTCAGGGTAATTCTAGTGGCACTCCATTAACGGAGCCACCTGCAAAAAAGAGCAGAGGAAGACCGCCCGGCTCCGGAAAGAAGCAAATGGACGCTCTGGGGACTGGTGGTGTTGGTTTTACCCCCCATGTTATCCTGGTGAATCCTGGGGAGGATATAGCATCCAAAATCATGGCCTTTTCAGAGCAAGGGCCAAGAACAGTTTGTGTTCTCTCTGCGTATGGTGCAGTCTGCAATGTTATGCTTCGTCAACCAGCTTCTTGTGGTGGCACAATGAGCTATGAGATATATATAGGGAAATATGAACTCATTTCTCTATCAGGTTCCTACTTGTTTGCTGAAAATCATGGTAGTCGAAGTCGATCTGGTGGCTTGAGTGTAATCATGGCCGGAGCAGATGGGCAAGTTCTTGGTGGTGGAGTTACAGGAATATTATTGGCTGCAACCCAAGTTCAGGTTATTGTGGGGAGCTTTATTGTGGATGAGAAAAAAGCCAATGCAAATGTTCAAAAATCTTGCTCTTCAACCGCACCACCGCAAATGATAAACTTCGGGACGGATGCCAGCCCTTCGTCACAAATGGCTTCCAGTGATTCATCTGATGAAAATGCCAGCAGCCCTCTTACCCGGCCCCCAGGAATTTACAACAACACCAGCCAACCAATTCAAAATAACGTTCAGATGTATCGACTATGGGGTGACCAAACGCAACATTGA 1074 47.77 MDLREVQPPLLSPASNMMMGVGPTHYPTSMPNSNNSMIGPNSAAAHMMSPTSRLPFNSVVTPVSKPLDSQNSNVYDGSSTGLRTGGFNIETEKKKRGRPRKYSPDGNIALGLAPTPVGQTQGNSSGTPLTEPPAKKSRGRPPGSGKKQMDALGTGGVGFTPHVILVNPGEDIASKIMAFSEQGPRTVCVLSAYGAVCNVMLRQPASCGGTMSYEIYIGKYELISLSGSYLFAENHGSRSRSGGLSVIMAGADGQVLGGGVTGILLAATQVQVIVGSFIVDEKKANANVQKSCSSTAPPQMINFGTDASPSSQMASSDSSDENASSPLTRPPGIYNNTSQPIQNNVQMYRLWGDQTQH 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10724681 10729040 + Bpe022965.1 Bpe08g00843 107719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00843 357 MobiDBLite consensus disorder prediction 114 131 - -
Bpe08g00843 357 MobiDBLite consensus disorder prediction 67 151 - -
Bpe08g00843 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13-LIKE ISOFORM X1 76 342 - -
Bpe08g00843 357 ProSiteProfiles PPC domain profile profile. 155 298 IPR005175 -
Bpe08g00843 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 76 342 IPR039605 GO:0003680
Bpe08g00843 357 MobiDBLite consensus disorder prediction 88 102 - -
Bpe08g00843 357 SMART AT_hook_2 93 105 IPR017956 GO:0003677
Bpe08g00843 357 SMART AT_hook_2 135 147 IPR017956 GO:0003677
Bpe08g00843 357 CDD DUF296 160 277 IPR005175 -
Bpe08g00843 357 SUPERFAMILY AF0104/ALDC/Ptd012-like 159 278 - -
Bpe08g00843 357 Gene3D - 161 292 - -
Bpe08g00843 357 MobiDBLite consensus disorder prediction 67 86 - -
Bpe08g00843 357 Pfam Plants and Prokaryotes Conserved (PCC) domain 161 277 IPR005175 -
Bpe08g00843 357 MobiDBLite consensus disorder prediction 290 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00843 Bpe-Chr8:10724681 Bpe14g00976 Bpe-Chr14:7213974 6.94E-62 dispersed
Bpe11g00343 Bpe-Chr11:2474577 Bpe08g00843 Bpe-Chr8:10724681 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00843 - - zju:107430497 401.364