Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00845 ATGGCTGGTTTGGATTTGGGAAATCGCTATGTTCATCCGCTGCACTTACCAGACTTGCACCTCCAAAGACTACCTCAGTCTCACCCGCCATCAAATTCCGAGGAAGATCTCAATCGAGGCACTCATTTTTCAGGGGAAGATGGATCTCACCAAGCCATAGACAGCGCCGGAGATGTGGTCGGTCGCAGACCTCGTGGGCGACCACCTGGCTCCAAAAACAAGCCTAAACCGCCGGTTATAATTACACGGGAGAGTGCCAACACTCTCCGAGCTCATATTCTCGAGGTTGGCAATGGCACTGATGTGTTCGACTGTGTCGCTACCTACGCTCGCCGTAGGCAGCGGGGGATCTGCATCTTGAGCGGGAGTGGGATGGTGACAAACGTCAGCCTGAGACAACCGACGGCTGCTGGTGCCGTCGTAACCCTACATGGGACGTTTGAGATACTATCGCTTTCAGGTTCCTTTTTGCCGCCGCCAGCTCCGCCGGGAGCCACGAGTCTGACTATATTTTTGGCTGGTGGTCAAGGGCAGGTGGTTGGAGGAAGTGTCGTGGGGGAGTTGATTGCGGCTGGGCCTGTAATCCTCATCGCTGCATCGTTTACTAACGTGCCCTACGAGAGACTGCCTTTGGATGAGGAGGAGAATCTTCCTGTTCAGGAGTCTGATTCTCCGGCAGCCGGAGCTGGAAGTGGTATTGGCGTAGGGAATAACCCATTTCCGGATCCTTCTTCTGGGCTTCCTTTCCTCAATCTGCCACTTAATTTTCCGAACGTTCAGCTTCCCAGCGATGGATGGGCAACTAATTCAGCAGCTCGTCCATTTTGA 828 53.86 MAGLDLGNRYVHPLHLPDLHLQRLPQSHPPSNSEEDLNRGTHFSGEDGSHQAIDSAGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGTDVFDCVATYARRRQRGICILSGSGMVTNVSLRQPTAAGAVVTLHGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELIAAGPVILIAASFTNVPYERLPLDEEENLPVQESDSPAAGAGSGIGVGNNPFPDPSSGLPFLNLPLNFPNVQLPSDGWATNSAARPF 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10747501 10748328 - Bpe022967.1 Bpe08g00845 107721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00845 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 274 IPR014476 GO:0003680
Bpe08g00845 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 203 IPR005175 -
Bpe08g00845 275 Gene3D - 89 223 - -
Bpe08g00845 275 ProSiteProfiles PPC domain profile profile. 86 223 IPR005175 -
Bpe08g00845 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 274 - -
Bpe08g00845 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 218 - -
Bpe08g00845 275 MobiDBLite consensus disorder prediction 21 80 - -
Bpe08g00845 275 CDD DUF296 90 173 IPR005175 -
Bpe08g00845 275 MobiDBLite consensus disorder prediction 215 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00845 Bpe-Chr8:10747501 Bpe11g00699 Bpe-Chr11:5379086 4.54E-78 dispersed
Bpe08g00845 Bpe-Chr8:10747501 Bpe13g00896 Bpe-Chr13:15019899 4.33E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00845 - - jre:108994023 360.147