Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00869 ATGGGTACCAGACCCCAGAATCCATGCCGAGAAGACGACGACGACGACGACCTTCATAGCAGTCGTGCCGCCACTATTTCAGGCCAATCTGTGTCCATGAGTGGCAGCATCGGATCCCCCTCCAGCCGAAGTGAGCAAACGATGGCTACCCCTGCCAGTGACAATACTTTCGTTCGACTAAACCACCTTGATAGTCACGGAGACGATGTCGGATCGCAAGGCGCTATTTCTAACAAGAAGAAAAAGAGAGGTCAGCGTGCTGTTGGAGGCGATAAGAGTGGAAGAGGGCTTCGCCAATTCAGCATGAAAGTTTGTGAAAAAGTGGAAAGCAAGGGAAGAACATCCTACAACGAGGTTGCAGATGAACTTGTGGCTGAGTTTGTTGATCCTAGCAGTAGTCTTGCATCCCCAGATCAGCAACAATATGATGAAAAGAACATCCGGCGAAGGGTATACGATGCCCTAAATGTTCTCATGGCAATGGACATTATATCGAAGGATAAGAAAGAGATACAATGGAAGGGTTTACCTCGAACGACTCTGAATGATGTTGAAGAACTAAAGACAGAGAGGCAGGGACTTAGAAATAGAATAGATAAGAAAGCCGCATACCTGCAAGAGCTGGAGGAGCAATACGTAGGCCTTCAGAATCTGATTCAGCGAAATGAACAATTATACAGTTCTGGAAATGCTCCAAGTGGTGGTGTGTCTTTACCTTTTATCTTGGTGCAGACCCGTCCGCATGCGACAGTTGAAGTAGAAATATCCGAAGATATGCAGCTCGTGCATTTTGACTTCAACAGCACACCTTTTGAGCTCCACGATGACAACTATGTATTGAAGGCGATGAAACTTTGTGAGAGACAAGCCGGTGATAATAGTGCACAGAATTTCATTGCAGATGGAGGGGAAGGTTCCGGAATACAGGTAGTGTCTGTGAGGAAACCAGCATCACCACCTCTTCCGGGAATTCTCAAAGCACGTGTCAAGCACGAACACTAA 1002 46.81 MGTRPQNPCREDDDDDDLHSSRAATISGQSVSMSGSIGSPSSRSEQTMATPASDNTFVRLNHLDSHGDDVGSQGAISNKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTSYNEVADELVAEFVDPSSSLASPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTTLNDVEELKTERQGLRNRIDKKAAYLQELEEQYVGLQNLIQRNEQLYSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKLCERQAGDNSAQNFIADGGEGSGIQVVSVRKPASPPLPGILKARVKHEH 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11059157 11067068 + Bpe022992.1 Bpe08g00869 107745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00869 333 Coils Coil 184 225 - -
Bpe08g00869 333 PIRSF Txn_factor_DP 6 316 IPR015648 GO:0005667|GO:0051726
Bpe08g00869 333 SMART E2F_TDP_2 92 175 IPR003316 GO:0005667|GO:0006355
Bpe08g00869 333 PANTHER TRANSCRIPTION FACTOR DP 23 333 - -
Bpe08g00869 333 Gene3D - 87 180 IPR036388 -
Bpe08g00869 333 SUPERFAMILY E2F-DP heterodimerization region 181 291 IPR037241 -
Bpe08g00869 333 MobiDBLite consensus disorder prediction 1 50 - -
Bpe08g00869 333 CDD DP_DD 180 283 IPR014889 -
Bpe08g00869 333 Pfam Transcription factor DP 183 297 IPR014889 -
Bpe08g00869 333 Gene3D Transcription factor DP 181 301 IPR038168 -
Bpe08g00869 333 PANTHER TRANSCRIPTION FACTOR DP 23 333 IPR015648 GO:0005667|GO:0051726
Bpe08g00869 333 MobiDBLite consensus disorder prediction 62 95 - -
Bpe08g00869 333 Pfam E2F/DP family winged-helix DNA-binding domain 95 175 IPR003316 GO:0005667|GO:0006355
Bpe08g00869 333 SUPERFAMILY Winged helix DNA-binding domain 95 176 IPR036390 -
Bpe08g00869 333 MobiDBLite consensus disorder prediction 7 21 - -
Bpe08g00869 333 MobiDBLite consensus disorder prediction 22 50 - -
Bpe08g00869 333 SMART DP_2 182 331 IPR014889 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00869 Bpe-Chr8:11059157 Bpe08g00870 Bpe-Chr8:11081748 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21782 PF08781 DP 1.90E-42 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00869 K04683 - zju:107414839 541.576