Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00877 ATGGACCCAGGTGATAAAGGTCAAGTTGTGGATGTGAGGTCAGTCGTTGAAGCAGTCGCTGCCGGTGGCAATTGCGATGTTCCGGTCTACGTGGTCGAAAGCCTTTGCATGCGCTGTAGAGAAAACGGGATAACAAGGTTTCTTCTAACTATAATTCCACACTTCAGGAAGATATTGTTGTCAGCCTTTGAATGTACACATTGTGGTGAGAGGAATAATGAGGTTCAATTCGCTGGAGAGATTCAACCGCGTGGATGCTGCTACATTTTGGAGGTCTCCGCTGGCGATTTGAAGATGCTTAATCGACAAGTAGTGAAAGCTGAGTCTGCTACAATTAAGATTCCTGATTTGGATTTCGAGATTCCTACTGAGGCTCAACGAGGAACTCTTTCTACGGTGGAAGGGATACTAGCTAGAGCAATGGATGAATTGCAGGCTCTGCAAGAAGAGCGTAGGAGATTGGATCCTCAAACCGCTGAAGCAATTGATCAGTTTTTGTTGAAATTAAAAGCTTGTGCGATGGGAGATACATCATTCACTTTCATCTTGGATGATCCGGCTGGAAACAGCTTCATTGAGAATCCATATGCTCCATCGTCGGACCCATCATTGAGTGTTAAGTTCTATGAGCGAACTCCAGAGCAACAAGCATCATTGGGATATCTCGTTGACTCATTTGAATCAGGAGAAGGTGCTAATGGAGCATTATCAGATGAAAGGGCTGGTGTTTCAGAAATCGGAACAGTGCCAACTTCATCAGTTGGAGCACCAGCTGGCCATCGAGCAATTGCTCAGAGTAATAGCGCAGAGATTGCTGAAGCTTTATTCCGTTACACTGCTCCTGAAGAAGTGATGACTTTTCCATCAACATGTGGGGCTTGTGCTACCAGCTGCGAGACTCGAATGTTTGTTACTAAAATACCTTACTTTCAAGAAGTGATTGTCATGGCATCCACCTGTGATTTATGTGGTTACCGTAATTCTGAGTTGAAGCCTGGTGGTCGAATTCCTGAAAAAGGAAAAGTAATTACTCTCCAAGTAAAGAGCTCTAAGGATCTTAGTCGGGATGTTATAAAGTCAGATACTGCTAGTGTTAGAGTTCCGGATCTGGACTTGGAGCTGGCTAGTGGCACTCTTGGAGGAGTTGTTACAACGGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAGAGTGCATGGATTTACCTTTGGAGACAGTCTTGATGATGATAAAAAGAGCAAGTGGCAAGATTTTGGAAAGAGATTAAACAAGCTTCTGACTTTGGAAGAGCCTTGGACTTTGATTTTGGACGATGCATTGGCAAATTCATTTGTTGCTCCAGCGACTGACAATATCAAAGACGACCTTCAATTAACGTTCGAGGAGTATCAGAGGTCATGGGAGCAGAACGAAGAGCTGGGTCTGAACGATATGAACACGGGATCAGCTGACGGTGCTTATGATTCGGGTGAGTAG 1482 44.13 MDPGDKGQVVDVRSVVEAVAAGGNCDVPVYVVESLCMRCRENGITRFLLTIIPHFRKILLSAFECTHCGERNNEVQFAGEIQPRGCCYILEVSAGDLKMLNRQVVKAESATIKIPDLDFEIPTEAQRGTLSTVEGILARAMDELQALQEERRRLDPQTAEAIDQFLLKLKACAMGDTSFTFILDDPAGNSFIENPYAPSSDPSLSVKFYERTPEQQASLGYLVDSFESGEGANGALSDERAGVSEIGTVPTSSVGAPAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACATSCETRMFVTKIPYFQEVIVMASTCDLCGYRNSELKPGGRIPEKGKVITLQVKSSKDLSRDVIKSDTASVRVPDLDLELASGTLGGVVTTVEGLITKISESLERVHGFTFGDSLDDDKKSKWQDFGKRLNKLLTLEEPWTLILDDALANSFVAPATDNIKDDLQLTFEEYQRSWEQNEELGLNDMNTGSADGAYDSGE 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11169310 11179103 + Bpe023000.1 Bpe08g00877 107753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00877 493 PANTHER ZINC FINGER PROTEIN ZPR1 1 493 IPR040141 -
Bpe08g00877 493 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 290 481 IPR004457 GO:0008270
Bpe08g00877 493 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 36 218 IPR004457 GO:0008270
Bpe08g00877 493 MobiDBLite consensus disorder prediction 473 493 - -
Bpe08g00877 493 Gene3D ZPR1, A/B domain 335 477 IPR042451 -
Bpe08g00877 493 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Bpe08g00877 493 Gene3D ZPR1, zinc finger domain 279 334 IPR042452 -
Bpe08g00877 493 Gene3D ZPR1, zinc finger domain 23 79 IPR042452 -
Bpe08g00877 493 Coils Coil 130 157 - -
Bpe08g00877 493 PANTHER ZPR1 ZINC-FINGER DOMAIN PROTEIN 1 493 - -
Bpe08g00877 493 Pfam ZPR1 zinc-finger domain 34 193 IPR004457 GO:0008270
Bpe08g00877 493 Pfam ZPR1 zinc-finger domain 289 447 IPR004457 GO:0008270
Bpe08g00877 493 SMART zpr1 289 449 IPR004457 GO:0008270
Bpe08g00877 493 SMART zpr1 34 194 IPR004457 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00877 K06874 - pop:7468335 762.296