Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00893 ATGGCGGCCTTTACCTCCCCCACCTCCGTTACTTCTTCTTCTTCTTCTTCTTCCACTAGACGACTACTTTCCCCCCTTTACCCTGCCTCTAAAACCCTGTTTTTCACCTCCAAAGTTGCCTCCTTCTACCCTCTTTCCTCCACCGCGTTCCCGAAACTCTTTCCCCTCAAATCCTTTTCCAAATCAACAGCAGATCTTTCCCCCATCGACGGCGCTTCCTCCTCCTCCGACGGTACAGCCTCCCCCGCTGAATCTTCGCGATCCCTCAAATCCCGACTCTGCAATGGCGAAACCCTCTATGGTCTTTTTCTTCTCAGCTTCTCCCCCACCCTGGCAGAGATTGCCGGTCTCGCCGGATACGACTTTGTCGTCGTTGACATGGAACACGGCTCGGGCGGCATCTCCGAATCCCTCGATTGCCTCCGCGCCCTGGCCGCCGTCAGAACCGCTGCGATTCTCCGGTTGCCGGAGAGCTCAGCGATGTGGGCAAAGAAAGCCCTAGATCTGGGCCCGCAGGGCATCATGTTCCCGATGATCGAATCCTCCAAAGACGCGAAGAAAGCAGTGTCATACTGCAGGTATCCACCAGCAGGCGTCCGGGGGGCGGCGCACCCGGTGGTGCGAGCATCAAAGTACGGCATCGATGAAGGGTATTTGAGTAATTACGAAGAAAATCTTCTAATAATGTGCCAGGTTGAATCAGAGCAAGGGGTGAAGAAGATAGGAGAGATCTCAGCCGTTGATGGGGTAGACTGCATTCAAATGGGACCGATAGATCTAAGCGCCAGCATGGGGTATTTGTGGGACCCAGGGAACAAGAAGGCGAGGGAGATGCTGAGGGTGGCAGAGAAGGGTGTGCTGGCGTCCAAATCAGACGGTGGAGGTGGAGCTTTCTTATCAGGGTTCGCTATGCCGTACGATGGGCCCACTGATCTGCTGAAACGCGGGTACCATATGGTGTCTGGGGCCGTCGACGTGGGTATGTTCAGGAGCGCCGCGGTGGAGGATGTGAGTAGGTTCAAGATGGCCTTGATGGACGGCTCCGATGAAGAAGATTTCGAAGATCATAAGGATTCTGATGAAAAAGAGCAAAAGATGGCCAAACAGGGCCATTTTCTGCAAGCTTTTAAGCTCTTCATCTTCTCAACAATGGCGGCCACCTCCATCTCCTCCCATTACAAAGTCGGAGATTTAGATTCCTGGGGCATCCCTCCCTCTGTAAACCCATCCCTCTACACCAAATGGCCCAAATACCACGATCTCAAGATCGGCGATTCCATCTTGTTTCTTTACCCACCGAGTCAAGACTCAGTGATTCAAGTGAGTTCGCAATCCTACTATGGCTGCAACCTCGCAGATCCGATAATGTATATGAACGATGGAAACTCAGTTTTCAATATTACTTCGTACGGAGATTTGTATTTCACGAGTGGAGAGGCTGGGCACTGCGAGAAGAAACAGAAGCTTCATATTTCTGTGCTTTCTGGAAATGGGTCTGCGTCTGCTTCCTCAGAAGCCCCCCAGATTTCGCCTTCTTATCCCACTGTTTTTGGGTCGATTCCATTGGGGCATTCTGCTTCTCCTTCTTCTTCTTCTTCTCCGCGAGTGCATAGCTTATCAGTAACAATGGCGGGTCTTGCTGGATTCGCTTTTGCTTTTACTTTTTAA 1668 51.86 MAAFTSPTSVTSSSSSSSTRRLLSPLYPASKTLFFTSKVASFYPLSSTAFPKLFPLKSFSKSTADLSPIDGASSSSDGTASPAESSRSLKSRLCNGETLYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGSGGISESLDCLRALAAVRTAAILRLPESSAMWAKKALDLGPQGIMFPMIESSKDAKKAVSYCRYPPAGVRGAAHPVVRASKYGIDEGYLSNYEENLLIMCQVESEQGVKKIGEISAVDGVDCIQMGPIDLSASMGYLWDPGNKKAREMLRVAEKGVLASKSDGGGGAFLSGFAMPYDGPTDLLKRGYHMVSGAVDVGMFRSAAVEDVSRFKMALMDGSDEEDFEDHKDSDEKEQKMAKQGHFLQAFKLFIFSTMAATSISSHYKVGDLDSWGIPPSVNPSLYTKWPKYHDLKIGDSILFLYPPSQDSVIQVSSQSYYGCNLADPIMYMNDGNSVFNITSYGDLYFTSGEAGHCEKKQKLHISVLSGNGSASASSEAPQISPSYPTVFGSIPLGHSASPSSSSSPRVHSLSVTMAGLAGFAFAFTF 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11308293 11310662 - Bpe023017.1 Bpe08g00893 107769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00893 555 ProSiteProfiles Phytocyanin domain profile. 391 495 IPR003245 GO:0009055
Bpe08g00893 555 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE FAMILY PROTEIN 82 351 - -
Bpe08g00893 555 Pfam Plastocyanin-like domain 410 485 IPR003245 GO:0009055
Bpe08g00893 555 Gene3D - 84 350 IPR040442 -
Bpe08g00893 555 MobiDBLite consensus disorder prediction 1 21 - -
Bpe08g00893 555 Pfam HpcH/HpaI aldolase/citrate lyase family 100 331 IPR005000 GO:0003824
Bpe08g00893 555 Gene3D - 391 506 IPR008972 -
Bpe08g00893 555 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 87 343 IPR015813 GO:0003824
Bpe08g00893 555 PANTHER 2-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE 82 351 - -
Bpe08g00893 555 SUPERFAMILY Cupredoxins 391 494 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00893 Bpe-Chr8:11308293 Bpe14g00229 Bpe-Chr14:2464490 1.18E-20 dispersed
Bpe08g00893 Bpe-Chr8:11308293 Bpe10g00662 Bpe-Chr10:13208226 7.01E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00893 - - pvy:116120881 455.677