Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00913 | ATGGATTTTGGGTTTGGTGAAGAGAGAGGTAAGATACCTTTTTCTTATTCTTCTTCCTCTTCGTCCCCTTCGTCTTCTTCGCAGTACAAAACGGCCAATATGATATCTCTAGGCAATAATCAGAGCTGGGAGTCTCATCTTTTCGATGAGTGCCAGCAGCAGCCGAGAGGGCTTGAGCTGATGGCCAGAAACGATGAAGTAGTGAGAGGGTCTGGAGGTGCAGGCGGCCATGGTAGTATCGCGAGCTTTTGTATGGAGAAGGAACACATGTTCGACAAGGTTGTCACTCCCAGCGACGTAGGAAAACTGAATCGGCTCGTTATTCCGAAACAGCACGCAGAAAAGTATTTTCCTCTCGATTCATCCACAAACGAGAAAGGTCTCCTCTTGAATTTCGAAGATCGGAATGGAAAGTCATGGCGATTTCGATACTCGTACTGGAATAGCAGCCAGAGCTACGTTATGACAAAAGGGTGGAGTCGGTTTGTGAAGGAGAAGAAGCTAGACGCCGGCGACATTGTTTCGTTCCAGCGTGGAGTTGGGGAGGCGGGAAAAGATCGTCTCTATATTGACTGGCAGCGCCGCCCTGATGCGCCCCAACGGGCAGCGGCCCTAATTCCACAACAATTCTCTTTCCACCACCACCACCAGTCAATCCCTTGGAGCCCCTTGTTCTTCAGTTCCATGGCGGCTGCAACGTCCTTGTCTTCCCCACAGGACCACTTGCACTTGTCGCACCTAAACAGCAATGTCATCCACAGAGTTACCTCTGCCGGTTACGGCGGTATGGTAAACCCACACCCACATCCCCCACCAAACTGCTCAAACGGATCAATTCTTTACTGCAGGTTGCCGCCGGGGGGGTCACAAGCACAGCCGTTTGAGACGTCGGCTCACGTTCCACGTGGGGGTGGAGTGGAACCGATGGTGTTTGATTCCGTTCCAGTGGTCCAAGGGAAAGCGGCTGCTAAGAAACTCCGGCTGTTTGGTGTTAACATGGAGTGCCCAGTGTCGGAATCAGACAGCCGCCGGGAGACAGAATCTCATCTTCCGCCCAGTTTTTCTTCTTCTGGCTCTCAACATTCTCTCCAACTGAGGCTCTATAACGGCACTCCAATACCCGCCCATCTTCTCAACGAAGACAACCCTACTACCATGTCCTTAAATTTCAACATTTGA | 1179 | 51.23 | MDFGFGEERGKIPFSYSSSSSSPSSSSQYKTANMISLGNNQSWESHLFDECQQQPRGLELMARNDEVVRGSGGAGGHGSIASFCMEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGEAGKDRLYIDWQRRPDAPQRAAALIPQQFSFHHHHQSIPWSPLFFSSMAAATSLSSPQDHLHLSHLNSNVIHRVTSAGYGGMVNPHPHPPPNCSNGSILYCRLPPGGSQAQPFETSAHVPRGGGVEPMVFDSVPVVQGKAAAKKLRLFGVNMECPVSESDSRRETESHLPPSFSSSGSQHSLQLRLYNGTPIPAHLLNEDNPTTMSLNFNI | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 11582969 | 11584147 | + | Bpe023036.1 | Bpe08g00913 | 107789 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00913 | 392 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 | 43 | 356 | - | - | |
Bpe08g00913 | 392 | Pfam | B3 DNA binding domain | 91 | 195 | IPR003340 | GO:0003677 | |
Bpe08g00913 | 392 | ProSiteProfiles | B3 DNA-binding domain profile. | 91 | 196 | IPR003340 | GO:0003677 | |
Bpe08g00913 | 392 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 43 | 356 | IPR044800 | GO:0003700 | |
Bpe08g00913 | 392 | Gene3D | - | 84 | 204 | IPR015300 | - | |
Bpe08g00913 | 392 | MobiDBLite | consensus disorder prediction | 337 | 362 | - | - | |
Bpe08g00913 | 392 | SUPERFAMILY | DNA-binding pseudobarrel domain | 88 | 190 | IPR015300 | - | |
Bpe08g00913 | 392 | MobiDBLite | consensus disorder prediction | 13 | 29 | - | - | |
Bpe08g00913 | 392 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Bpe08g00913 | 392 | CDD | B3_DNA | 89 | 178 | IPR003340 | GO:0003677 | |
Bpe08g00913 | 392 | SMART | B3_2 | 91 | 196 | IPR003340 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe08g00913 | Bpe11g00381 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00972 | Bpe-Chr4:6672978 | Bpe08g00913 | Bpe-Chr8:11582969 | 2.95E-92 | dispersed | |
Bpe04g01510 | Bpe-Chr4:21609092 | Bpe08g00913 | Bpe-Chr8:11582969 | 6.21E-51 | dispersed | |
Bpe08g00913 | Bpe-Chr8:11582969 | Bpe13g00799 | Bpe-Chr13:14351945 | 9.65E-55 | dispersed | |
Bpe11g00381 | Bpe-Chr11:2890171 | Bpe08g00913 | Bpe-Chr8:11582969 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21787 | PF02362 | B3 | 2.80E-29 | CL0405 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00913 | - | - | pop:18103453 | 345.125 |