Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00913 ATGGATTTTGGGTTTGGTGAAGAGAGAGGTAAGATACCTTTTTCTTATTCTTCTTCCTCTTCGTCCCCTTCGTCTTCTTCGCAGTACAAAACGGCCAATATGATATCTCTAGGCAATAATCAGAGCTGGGAGTCTCATCTTTTCGATGAGTGCCAGCAGCAGCCGAGAGGGCTTGAGCTGATGGCCAGAAACGATGAAGTAGTGAGAGGGTCTGGAGGTGCAGGCGGCCATGGTAGTATCGCGAGCTTTTGTATGGAGAAGGAACACATGTTCGACAAGGTTGTCACTCCCAGCGACGTAGGAAAACTGAATCGGCTCGTTATTCCGAAACAGCACGCAGAAAAGTATTTTCCTCTCGATTCATCCACAAACGAGAAAGGTCTCCTCTTGAATTTCGAAGATCGGAATGGAAAGTCATGGCGATTTCGATACTCGTACTGGAATAGCAGCCAGAGCTACGTTATGACAAAAGGGTGGAGTCGGTTTGTGAAGGAGAAGAAGCTAGACGCCGGCGACATTGTTTCGTTCCAGCGTGGAGTTGGGGAGGCGGGAAAAGATCGTCTCTATATTGACTGGCAGCGCCGCCCTGATGCGCCCCAACGGGCAGCGGCCCTAATTCCACAACAATTCTCTTTCCACCACCACCACCAGTCAATCCCTTGGAGCCCCTTGTTCTTCAGTTCCATGGCGGCTGCAACGTCCTTGTCTTCCCCACAGGACCACTTGCACTTGTCGCACCTAAACAGCAATGTCATCCACAGAGTTACCTCTGCCGGTTACGGCGGTATGGTAAACCCACACCCACATCCCCCACCAAACTGCTCAAACGGATCAATTCTTTACTGCAGGTTGCCGCCGGGGGGGTCACAAGCACAGCCGTTTGAGACGTCGGCTCACGTTCCACGTGGGGGTGGAGTGGAACCGATGGTGTTTGATTCCGTTCCAGTGGTCCAAGGGAAAGCGGCTGCTAAGAAACTCCGGCTGTTTGGTGTTAACATGGAGTGCCCAGTGTCGGAATCAGACAGCCGCCGGGAGACAGAATCTCATCTTCCGCCCAGTTTTTCTTCTTCTGGCTCTCAACATTCTCTCCAACTGAGGCTCTATAACGGCACTCCAATACCCGCCCATCTTCTCAACGAAGACAACCCTACTACCATGTCCTTAAATTTCAACATTTGA 1179 51.23 MDFGFGEERGKIPFSYSSSSSSPSSSSQYKTANMISLGNNQSWESHLFDECQQQPRGLELMARNDEVVRGSGGAGGHGSIASFCMEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGEAGKDRLYIDWQRRPDAPQRAAALIPQQFSFHHHHQSIPWSPLFFSSMAAATSLSSPQDHLHLSHLNSNVIHRVTSAGYGGMVNPHPHPPPNCSNGSILYCRLPPGGSQAQPFETSAHVPRGGGVEPMVFDSVPVVQGKAAAKKLRLFGVNMECPVSESDSRRETESHLPPSFSSSGSQHSLQLRLYNGTPIPAHLLNEDNPTTMSLNFNI 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11582969 11584147 + Bpe023036.1 Bpe08g00913 107789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00913 392 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 43 356 - -
Bpe08g00913 392 Pfam B3 DNA binding domain 91 195 IPR003340 GO:0003677
Bpe08g00913 392 ProSiteProfiles B3 DNA-binding domain profile. 91 196 IPR003340 GO:0003677
Bpe08g00913 392 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 43 356 IPR044800 GO:0003700
Bpe08g00913 392 Gene3D - 84 204 IPR015300 -
Bpe08g00913 392 MobiDBLite consensus disorder prediction 337 362 - -
Bpe08g00913 392 SUPERFAMILY DNA-binding pseudobarrel domain 88 190 IPR015300 -
Bpe08g00913 392 MobiDBLite consensus disorder prediction 13 29 - -
Bpe08g00913 392 MobiDBLite consensus disorder prediction 1 29 - -
Bpe08g00913 392 CDD B3_DNA 89 178 IPR003340 GO:0003677
Bpe08g00913 392 SMART B3_2 91 196 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g00913 Bpe11g00381 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00972 Bpe-Chr4:6672978 Bpe08g00913 Bpe-Chr8:11582969 2.95E-92 dispersed
Bpe04g01510 Bpe-Chr4:21609092 Bpe08g00913 Bpe-Chr8:11582969 6.21E-51 dispersed
Bpe08g00913 Bpe-Chr8:11582969 Bpe13g00799 Bpe-Chr13:14351945 9.65E-55 dispersed
Bpe11g00381 Bpe-Chr11:2890171 Bpe08g00913 Bpe-Chr8:11582969 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21787 PF02362 B3 2.80E-29 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00913 - - pop:18103453 345.125