Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00918 ATGGTTTCTGAACCTAGAGACGGGGATTGTCTCGGTTGGGCTGCTAGAGATCCATCTGGGGTACTTTCTCCTTACAAATTCAGCCGCAGGACTGTAGGGTGTGATGATGTTTCTATAGCAATTACCCATTGTGGAGTCTGTTATGCGGACGTGGCATGTACCCGAAATGAACTTGGGGATTCCAAGTATCCTGTTGTGCCTGGACACGAGATAGCTGGAATCGTGAAAGAGGTTGGTTCGAACGTTAGTCAGTTCCGAGTAGGAGATCATGTTGGGGTGGGTACTTATGTCAATTCATGCAAAGATTGTGAGCATTGCAGTGATGGGGACGAAGTTTATTGCAGCAAAGGACTTGTTTTCACTTTCAATGGTGTTGATGCTGATGGTACAGTTACGAAAGGAGGATATTCCAACTATATAATTGCCTTGAATGTCAGGTACTGCTTCAAGATTCCCCAAAATTATCCATTGGCTTCAGCTGCTCCTCTACTTTGTGCTGGAATCACTGTATATGCTCCAATGATGTGGCATAAAATGAACCAACCTGGTAAATCTCTCGGCGTAATTGGCCTCGGTGGTCTTGGTCATTTGGCAGTCAAATTTGGGAAGGCTTTTGGCTTGAAAGTAACAATTTTGAGCACTAGCCCATCCAAGAAAGACGAAGCTTTGAGCCTTCTTGGAGCCGATAATTTTGTTGTCTCATCTGACATAGAACAGATGAAGGCACTGAATAAGTCACTTGACTTCATAATCGATGCAGCATCGGGTGATCATCCATTCGATCCGTATTTGTCTCTGTTGAAGAAGGGTGGTGTTATGGTCCTTGTGGGTTTTCCTAGTGAAGTCAAGTTCCACCCTGCAAGCCTCAGTATGAGAACAATTTCCGGCAGCATTGCTGGCGGTACAAAAGTGACCCAAGAGATGATCGACTTCTGTGCAGCTCATGAAATCTATCCAAATATAGAAGTGGTTCCGATTCAGTACTCGAATGAAGCTCTCGAGAGGCTTATAAAGAAGGATGTGAAGTACAGATTTGTGTTAGACATTGCCAATTCTTTGAAAGAATGTAGCGAAAATGAAGAAAGAGCTTGA 1092 43.96 MVSEPRDGDCLGWAARDPSGVLSPYKFSRRTVGCDDVSIAITHCGVCYADVACTRNELGDSKYPVVPGHEIAGIVKEVGSNVSQFRVGDHVGVGTYVNSCKDCEHCSDGDEVYCSKGLVFTFNGVDADGTVTKGGYSNYIIALNVRYCFKIPQNYPLASAAPLLCAGITVYAPMMWHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLKVTILSTSPSKKDEALSLLGADNFVVSSDIEQMKALNKSLDFIIDAASGDHPFDPYLSLLKKGGVMVLVGFPSEVKFHPASLSMRTISGSIAGGTKVTQEMIDFCAAHEIYPNIEVVPIQYSNEALERLIKKDVKYRFVLDIANSLKECSENEERA 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11617237 11619288 - Bpe023041.2 Bpe08g00918 107794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00918 363 Gene3D - 166 319 - -
Bpe08g00918 363 CDD CAD1 12 348 - -
Bpe08g00918 363 SMART PKS_ER_names_mod 20 347 IPR020843 GO:0016491
Bpe08g00918 363 SUPERFAMILY GroES-like 16 184 IPR011032 -
Bpe08g00918 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 317 IPR036291 -
Bpe08g00918 363 PANTHER - 6 353 - -
Bpe08g00918 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Bpe08g00918 363 Pfam Alcohol dehydrogenase GroES-like domain 35 143 IPR013154 -
Bpe08g00918 363 Gene3D - 13 349 - -
Bpe08g00918 363 Pfam Zinc-binding dehydrogenase 193 313 IPR013149 -
Bpe08g00918 363 PANTHER ALDEHYDE REDUCTASE 6 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00918 Bpe-Chr8:11617237 Bpe15g00392 Bpe-Chr15:15445271 1.09E-120 dispersed
Bpe11g00384 Bpe-Chr11:2921264 Bpe08g00918 Bpe-Chr8:11617237 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00918 K00083 - vvi:100244482 573.933